RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 OR51A4Q8NGJ6 313 aa4.58□□□□□ -1.68
USP3-215ENST00000559771 OR6F1Q8NGZ6 308 aa4.58□□□□□ -1.68
USP3-215ENST00000559771 GHSRQ92847 366 aa4.58□□□□□ -1.68
USP3-215ENST00000559771 CREB3L1Q96BA8 519 aa4.58□□□□□ -1.68
USP3-215ENST00000559771 RCC1LQ96I51 464 aaKnown RBP4.58□□□□□ -1.68
USP3-215ENST00000559771 C4orf36Q96KX1 117 aa4.58□□□□□ -1.68
USP3-215ENST00000559771 MARVELD1Q9BSK0 173 aa4.58□□□□□ -1.68
USP3-215ENST00000559771 PPIL3Q9H2H8 161 aaKnown RBP4.58□□□□□ -1.68
USP3-215ENST00000559771 ISG20L2Q9H9L3 353 aaKnown RBP4.58□□□□□ -1.68
USP3-215ENST00000559771 COMMD3Q9UBI1 195 aa4.58□□□□□ -1.68
USP3-215ENST00000559771 ZNF221Q9UK13 617 aa4.58□□□□□ -1.68
USP3-215ENST00000559771 SLC7A11Q9UPY5 501 aa4.58□□□□□ -1.68
USP3-215ENST00000559771 UBE2J1Q9Y385 318 aaPredicted RBP4.58□□□□□ -1.68
USP3-215ENST00000559771 KIAA2026Q5HYC2 2103 aa4.58□□□□□ -1.68
USP3-215ENST00000559771 DNAH7Q8WXX0 4024 aa4.58□□□□□ -1.68
USP3-215ENST00000559771 FAM240BA0A1B0GVZ2 78 aa4.57□□□□□ -1.68
USP3-215ENST00000559771 A0A1W2PPI3 338 aa4.57□□□□□ -1.68
USP3-215ENST00000559771 ODAMA1E959 279 aa4.57□□□□□ -1.68
USP3-215ENST00000559771 ANKRD34BA5PLL1 514 aa4.57□□□□□ -1.68
USP3-215ENST00000559771 LINC01548A6NM66 108 aa4.57□□□□□ -1.68
USP3-215ENST00000559771 TMEM212A6NML5 194 aa4.57□□□□□ -1.68
USP3-215ENST00000559771 LEUTXA8MZ59 168 aa4.57□□□□□ -1.68
USP3-215ENST00000559771 FAM25AB3EWG3 89 aa4.57□□□□□ -1.68
USP3-215ENST00000559771 FAM25CB3EWG5 89 aa4.57□□□□□ -1.68
USP3-215ENST00000559771 FAM25GB3EWG6 89 aa4.57□□□□□ -1.68
USP3-215ENST00000559771 SLC33A1O00400 549 aaPredicted RBP4.57□□□□□ -1.68
USP3-215ENST00000559771 PLA2G10O15496 165 aa4.57□□□□□ -1.68
USP3-215ENST00000559771 LYRM1O43325 122 aa4.57□□□□□ -1.68
USP3-215ENST00000559771 GSTZ1O43708 216 aaPredicted RBP4.57□□□□□ -1.68
USP3-215ENST00000559771 HPGDSO60760 199 aa4.57□□□□□ -1.68
USP3-215ENST00000559771 PEX14O75381 377 aa4.57□□□□□ -1.68
USP3-215ENST00000559771 ALDOBP05062 364 aa4.57□□□□□ -1.68
USP3-215ENST00000559771 ISG15P05161 165 aa4.57□□□□□ -1.68
USP3-215ENST00000559771 CSN2P05814 226 aa4.57□□□□□ -1.68
USP3-215ENST00000559771 CLEC2LP0C7M8 214 aa4.57□□□□□ -1.68
USP3-215ENST00000559771 PF4V1P10720 104 aa4.57□□□□□ -1.68
USP3-215ENST00000559771 PRKACAP17612 351 aa4.57□□□□□ -1.68
USP3-215ENST00000559771 ATF1P18846 271 aa4.57□□□□□ -1.68
USP3-215ENST00000559771 MNDAP41218 407 aa4.57□□□□□ -1.68
USP3-215ENST00000559771 POU3F4P49335 361 aa4.57□□□□□ -1.68
USP3-215ENST00000559771 THBS3P49746 956 aa4.57□□□□□ -1.68
USP3-215ENST00000559771 RBP2P50120 134 aa4.57□□□□□ -1.68
USP3-215ENST00000559771 MTCP1P56278 107 aa4.57□□□□□ -1.68
USP3-215ENST00000559771 AP3S2P59780 193 aa4.57□□□□□ -1.68
USP3-215ENST00000559771 DYRK1AQ13627 763 aa4.57□□□□□ -1.68
USP3-215ENST00000559771 IDNKQ5T6J7 187 aa4.57□□□□□ -1.68
USP3-215ENST00000559771 UTS2BQ765I0 119 aa4.57□□□□□ -1.68
USP3-215ENST00000559771 ZNF329Q86UD4 541 aa4.57□□□□□ -1.68
USP3-215ENST00000559771 RTN4RL2Q86UN3 420 aa4.57□□□□□ -1.68
USP3-215ENST00000559771 Q8IYB0 196 aa4.57□□□□□ -1.68
USP3-215ENST00000559771 TCTE3Q8IZS6 198 aa4.57□□□□□ -1.68
USP3-215ENST00000559771 OSR2Q8N2R0 312 aa4.57□□□□□ -1.68
USP3-215ENST00000559771 OR2G2Q8NGZ5 317 aa4.57□□□□□ -1.68
USP3-215ENST00000559771 RNF141Q8WVD5 230 aa4.57□□□□□ -1.68
USP3-215ENST00000559771 PP6455Q8WZ26 134 aa4.57□□□□□ -1.68
USP3-215ENST00000559771 RFT1Q96AA3 541 aa4.57□□□□□ -1.68
USP3-215ENST00000559771 FGGYQ96C11 551 aa4.57□□□□□ -1.68
USP3-215ENST00000559771 C10orf35Q96D05 121 aa4.57□□□□□ -1.68
USP3-215ENST00000559771 RBMXL1Q96E39 390 aaKnown RBP4.57□□□□□ -1.68
USP3-215ENST00000559771 PELI1Q96FA3 418 aa4.57□□□□□ -1.68
USP3-215ENST00000559771 BORCS8Q96FH0 119 aa4.57□□□□□ -1.68
USP3-215ENST00000559771 NOL4LQ96MY1 436 aaPredicted RBP4.57□□□□□ -1.68
USP3-215ENST00000559771 SPACA5Q96QH8 159 aa4.57□□□□□ -1.68
USP3-215ENST00000559771 P2RX4Q99571 388 aa4.57□□□□□ -1.68
USP3-215ENST00000559771 B9D2Q9BPU9 175 aa4.57□□□□□ -1.68
USP3-215ENST00000559771 COMMD4Q9H0A8 199 aa4.57□□□□□ -1.68
USP3-215ENST00000559771 C11orf54Q9H0W9 315 aaPredicted RBP4.57□□□□□ -1.68
USP3-215ENST00000559771 PLEKHA1Q9HB21 404 aa4.57□□□□□ -1.68
USP3-215ENST00000559771 TAS2R3Q9NYW6 316 aa4.57□□□□□ -1.68
USP3-215ENST00000559771 ZNF581Q9P0T4 197 aa4.57□□□□□ -1.68
USP3-215ENST00000559771 SPATA2Q9UM82 520 aa4.57□□□□□ -1.68
USP3-215ENST00000559771 ETV7Q9Y603 341 aa4.57□□□□□ -1.68
USP3-215ENST00000559771 SIRT4Q9Y6E7 314 aaPredicted RBP4.57□□□□□ -1.68
USP3-215ENST00000559771 HUWE1Q7Z6Z7 4374 aaKnown RBP4.57□□□□□ -1.68
USP3-215ENST00000559771 RYR2Q92736 4967 aa4.56□□□□□ -1.68
USP3-215ENST00000559771 DYNC2H1Q8NCM8 4307 aaKnown RBP4.56□□□□□ -1.68
USP3-215ENST00000559771 NAP1L6A6NFF2 107 aa4.56□□□□□ -1.68
USP3-215ENST00000559771 OR4C45A6NMZ5 311 aa4.56□□□□□ -1.68
USP3-215ENST00000559771 AIPO00170 330 aa4.56□□□□□ -1.68
USP3-215ENST00000559771 SH2D1BO14796 132 aa4.56□□□□□ -1.68
USP3-215ENST00000559771 DUS4LO95620 317 aaKnown RBP4.56□□□□□ -1.68
USP3-215ENST00000559771 DHFRP00374 187 aa4.56□□□□□ -1.68
USP3-215ENST00000559771 IGHV3-7P01780 117 aa4.56□□□□□ -1.68
USP3-215ENST00000559771 SNRNP70P08621 437 aaKnown RBP4.56□□□□□ -1.68
USP3-215ENST00000559771 UBCP0CG48 685 aaKnown RBP4.56□□□□□ -1.68
USP3-215ENST00000559771 SPNP16150 400 aa4.56□□□□□ -1.68
USP3-215ENST00000559771 ELK1P19419 428 aa4.56□□□□□ -1.68
USP3-215ENST00000559771 SRMP19623 302 aa4.56□□□□□ -1.68
USP3-215ENST00000559771 SLC6A1P30531 599 aa4.56□□□□□ -1.68
USP3-215ENST00000559771 BRS3P32247 399 aa4.56□□□□□ -1.68
USP3-215ENST00000559771 CCR9P51686 369 aa4.56□□□□□ -1.68
USP3-215ENST00000559771 ATP1B3P54709 279 aa4.56□□□□□ -1.68
USP3-215ENST00000559771 ZP1P60852 638 aa4.56□□□□□ -1.68
USP3-215ENST00000559771 RPS11P62280 158 aaKnown RBP eCLIP4.56□□□□□ -1.68
USP3-215ENST00000559771 RPL23AP62750 156 aaKnown RBP4.56□□□□□ -1.68
USP3-215ENST00000559771 Q499Y3 187 aa4.56□□□□□ -1.68
USP3-215ENST00000559771 ZFP69Q49AA0 526 aa4.56□□□□□ -1.68
USP3-215ENST00000559771 DEFB121Q5J5C9 76 aa4.56□□□□□ -1.68
USP3-215ENST00000559771 UBE2NLQ5JXB2 153 aa4.56□□□□□ -1.68
USP3-215ENST00000559771 RSBN1Q5VWQ0 802 aaPredicted RBP4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms