RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 TSPAN14Q8NG11 270 aa3.5□□□□□ -1.85
SNX1-205ENST00000559339 OR4X2Q8NGF9 303 aa3.5□□□□□ -1.85
SNX1-205ENST00000559339 OR8H1Q8NGG4 311 aa3.5□□□□□ -1.85
SNX1-205ENST00000559339 OR10R2Q8NGX6 335 aa3.5□□□□□ -1.85
SNX1-205ENST00000559339 OR2T10Q8NGZ9 312 aa3.5□□□□□ -1.85
SNX1-205ENST00000559339 OR1L1Q8NH94 360 aa3.5□□□□□ -1.85
SNX1-205ENST00000559339 CT45A3Q8NHU0 189 aa3.5□□□□□ -1.85
SNX1-205ENST00000559339 UBALD1Q8TB05 177 aa3.5□□□□□ -1.85
SNX1-205ENST00000559339 MRPL30Q8TCC3 161 aaKnown RBP3.5□□□□□ -1.85
SNX1-205ENST00000559339 RTN4IP1Q8WWV3 396 aaPredicted RBP3.5□□□□□ -1.85
SNX1-205ENST00000559339 EDARADDQ8WWZ3 215 aa3.5□□□□□ -1.85
SNX1-205ENST00000559339 S1PR3Q99500 378 aa3.5□□□□□ -1.85
SNX1-205ENST00000559339 RASL11BQ9BPW5 248 aa3.5□□□□□ -1.85
SNX1-205ENST00000559339 SULT4A1Q9BR01 284 aa3.5□□□□□ -1.85
SNX1-205ENST00000559339 LPAR5Q9H1C0 372 aa3.5□□□□□ -1.85
SNX1-205ENST00000559339 ATG5Q9H1Y0 275 aa3.5□□□□□ -1.85
SNX1-205ENST00000559339 ZNF702PQ9H963 129 aa3.5□□□□□ -1.85
SNX1-205ENST00000559339 SERTAD4Q9NUC0 356 aa3.5□□□□□ -1.85
SNX1-205ENST00000559339 PIPOXQ9P0Z9 390 aa3.5□□□□□ -1.85
SNX1-205ENST00000559339 SLC23A1Q9UHI7 598 aa3.5□□□□□ -1.85
SNX1-205ENST00000559339 AK3Q9UIJ7 227 aa3.5□□□□□ -1.85
SNX1-205ENST00000559339 DAPK2Q9UIK4 370 aa3.5□□□□□ -1.85
SNX1-205ENST00000559339 SIGLEC9Q9Y336 463 aa3.5□□□□□ -1.85
SNX1-205ENST00000559339 MOB4Q9Y3A3 225 aa3.5□□□□□ -1.85
SNX1-205ENST00000559339 KIAA2026Q5HYC2 2103 aa3.5□□□□□ -1.85
SNX1-205ENST00000559339 MGAM2Q2M2H8 2515 aa3.49□□□□□ -1.85
SNX1-205ENST00000559339 A0A075B6Q4 140 aa3.49□□□□□ -1.85
SNX1-205ENST00000559339 TRBV6-6A0A0A6YYG2 114 aa3.49□□□□□ -1.85
SNX1-205ENST00000559339 IGHV3-72A0A0B4J1Y9 119 aa3.49□□□□□ -1.85
SNX1-205ENST00000559339 TMEM272A0A1B0GTI8 110 aa3.49□□□□□ -1.85
SNX1-205ENST00000559339 FAM90A9PA6NNJ1 464 aa3.49□□□□□ -1.85
SNX1-205ENST00000559339 TRDCB7Z8K6 153 aa3.49□□□□□ -1.85
SNX1-205ENST00000559339 LDLRAD4O15165 306 aa3.49□□□□□ -1.85
SNX1-205ENST00000559339 KCNAB3O43448 404 aa3.49□□□□□ -1.85
SNX1-205ENST00000559339 LANCL1O43813 399 aa3.49□□□□□ -1.85
SNX1-205ENST00000559339 HIST1H1DP16402 221 aaKnown RBP3.49□□□□□ -1.85
SNX1-205ENST00000559339 GNB3P16520 340 aa3.49□□□□□ -1.85
SNX1-205ENST00000559339 MC5RP33032 325 aa3.49□□□□□ -1.85
SNX1-205ENST00000559339 SDC2P34741 201 aa3.49□□□□□ -1.85
SNX1-205ENST00000559339 CEACAM6P40199 344 aa3.49□□□□□ -1.85
SNX1-205ENST00000559339 ZNF134P52741 427 aa3.49□□□□□ -1.85
SNX1-205ENST00000559339 ZNF137PP52743 207 aa3.49□□□□□ -1.85
SNX1-205ENST00000559339 SCAND1P57086 179 aa3.49□□□□□ -1.85
SNX1-205ENST00000559339 SLC35B1P78383 322 aa3.49□□□□□ -1.85
SNX1-205ENST00000559339 PITPNAQ00169 270 aa3.49□□□□□ -1.85
SNX1-205ENST00000559339 ARFRP1Q13795 201 aa3.49□□□□□ -1.85
SNX1-205ENST00000559339 DIAPH2-AS1Q14236 149 aa3.49□□□□□ -1.85
SNX1-205ENST00000559339 HABP2Q14520 560 aaPredicted RBP3.49□□□□□ -1.85
SNX1-205ENST00000559339 HNF4GQ14541 408 aa3.49□□□□□ -1.85
SNX1-205ENST00000559339 MMDQ15546 238 aa3.49□□□□□ -1.85
SNX1-205ENST00000559339 HMGN3Q15651 99 aa3.49□□□□□ -1.85
SNX1-205ENST00000559339 PLAC9Q5JTB6 97 aa3.49□□□□□ -1.85
SNX1-205ENST00000559339 UTF1Q5T230 341 aa3.49□□□□□ -1.85
SNX1-205ENST00000559339 FAM71F2Q6NXP2 309 aa3.49□□□□□ -1.85
SNX1-205ENST00000559339 SFXN4Q6P4A7 337 aa3.49□□□□□ -1.85
SNX1-205ENST00000559339 SLC35E3Q7Z769 313 aa3.49□□□□□ -1.85
SNX1-205ENST00000559339 NDUFA11Q86Y39 141 aa3.49□□□□□ -1.85
SNX1-205ENST00000559339 CROCCP3Q8IVE0 287 aa3.49□□□□□ -1.85
SNX1-205ENST00000559339 IZUMO1Q8IYV9 350 aa3.49□□□□□ -1.85
SNX1-205ENST00000559339 C5orf56Q8N8D9 126 aa3.49□□□□□ -1.85
SNX1-205ENST00000559339 C11orf44Q8N8P7 122 aa3.49□□□□□ -1.85
SNX1-205ENST00000559339 OR4F17Q8NGA8 305 aa3.49□□□□□ -1.85
SNX1-205ENST00000559339 OR5AU1Q8NGC0 362 aa3.49□□□□□ -1.85
SNX1-205ENST00000559339 OR52L2PQ8NGH6 319 aa3.49□□□□□ -1.85
SNX1-205ENST00000559339 OR10J5Q8NHC4 309 aa3.49□□□□□ -1.85
SNX1-205ENST00000559339 CHPT1Q8WUD6 406 aa3.49□□□□□ -1.85
SNX1-205ENST00000559339 CFHR4Q92496 578 aa3.49□□□□□ -1.85
SNX1-205ENST00000559339 ST6GALNAC6Q969X2 333 aa3.49□□□□□ -1.85
SNX1-205ENST00000559339 ARHGAP5-AS1Q96IT6 56 aa3.49□□□□□ -1.85
SNX1-205ENST00000559339 EAF1Q96JC9 268 aaPredicted RBP3.49□□□□□ -1.85
SNX1-205ENST00000559339 OR4F4Q96R69 305 aa3.49□□□□□ -1.85
SNX1-205ENST00000559339 GFI1Q99684 422 aa3.49□□□□□ -1.85
SNX1-205ENST00000559339 ZNF251Q9BRH9 671 aa3.49□□□□□ -1.85
SNX1-205ENST00000559339 CHCHD6Q9BRQ6 235 aa3.49□□□□□ -1.85
SNX1-205ENST00000559339 GINS4Q9BRT9 223 aa3.49□□□□□ -1.85
SNX1-205ENST00000559339 PECRQ9BY49 303 aa3.49□□□□□ -1.85
SNX1-205ENST00000559339 OR51E2Q9H255 320 aa3.49□□□□□ -1.85
SNX1-205ENST00000559339 KCNK15Q9H427 330 aa3.49□□□□□ -1.85
SNX1-205ENST00000559339 Q9N2K0 584 aa3.49□□□□□ -1.85
SNX1-205ENST00000559339 LIN7CQ9NUP9 197 aaKnown RBP3.49□□□□□ -1.85
SNX1-205ENST00000559339 KIAA1456Q9P272 454 aa3.49□□□□□ -1.85
SNX1-205ENST00000559339 ZNF221Q9UK13 617 aa3.49□□□□□ -1.85
SNX1-205ENST00000559339 RBM7Q9Y580 266 aaKnown RBP3.49□□□□□ -1.85
SNX1-205ENST00000559339 SAA2-SAA4A0A096LPE2 208 aa3.48□□□□□ -1.85
SNX1-205ENST00000559339 A0A0A6YYD4 124 aa3.48□□□□□ -1.85
SNX1-205ENST00000559339 TCRBV4S1A1TA0A5B7 111 aa3.48□□□□□ -1.85
SNX1-205ENST00000559339 SHISA3A0PJX4 238 aa3.48□□□□□ -1.85
SNX1-205ENST00000559339 PSMB11A5LHX3 300 aa3.48□□□□□ -1.85
SNX1-205ENST00000559339 OR5H14A6NHG9 310 aa3.48□□□□□ -1.85
SNX1-205ENST00000559339 H7C2Y5 167 aa3.48□□□□□ -1.85
SNX1-205ENST00000559339 AP4M1O00189 453 aa3.48□□□□□ -1.85
SNX1-205ENST00000559339 RAB27BO00194 218 aa3.48□□□□□ -1.85
SNX1-205ENST00000559339 ITGB1BP1O14713 200 aa3.48□□□□□ -1.85
SNX1-205ENST00000559339 BET1O15155 118 aa3.48□□□□□ -1.85
SNX1-205ENST00000559339 SLC31A2O15432 143 aa3.48□□□□□ -1.85
SNX1-205ENST00000559339 FABP7O15540 132 aa3.48□□□□□ -1.85
SNX1-205ENST00000559339 AIREO43918 545 aa3.48□□□□□ -1.85
SNX1-205ENST00000559339 DIRAS3O95661 229 aa3.48□□□□□ -1.85
SNX1-205ENST00000559339 FCGR3AP08637 254 aa3.48□□□□□ -1.85
SNX1-205ENST00000559339 GSTP1P09211 210 aaKnown RBP3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms