RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 SCOCQ9UIL1 159 aa10.56□□□□□ -0.72
VPS18-203ENST00000558855 WSB1Q9Y6I7 421 aa10.56□□□□□ -0.72
VPS18-203ENST00000558855 IGHV7-81A0A0B4J1V7 117 aa10.55□□□□□ -0.72
VPS18-203ENST00000558855 ST8SIA5O15466 376 aa10.55□□□□□ -0.72
VPS18-203ENST00000558855 SOX15O60248 233 aa10.55□□□□□ -0.72
VPS18-203ENST00000558855 IGF1P05019 195 aa10.55□□□□□ -0.72
VPS18-203ENST00000558855 CDK1P06493 297 aa10.55□□□□□ -0.72
VPS18-203ENST00000558855 SOX6P35712 828 aa10.55□□□□□ -0.72
VPS18-203ENST00000558855 CDX1P47902 265 aaPredicted RBP10.55□□□□□ -0.72
VPS18-203ENST00000558855 ACTBP60709 375 aa10.55□□□□□ -0.72
VPS18-203ENST00000558855 RPS27AP62979 156 aaKnown RBP10.55□□□□□ -0.72
VPS18-203ENST00000558855 GABPB1Q06547 395 aaPredicted RBP10.55□□□□□ -0.72
VPS18-203ENST00000558855 MED21Q13503 144 aa10.55□□□□□ -0.72
VPS18-203ENST00000558855 FHL3Q13643 280 aa10.55□□□□□ -0.72
VPS18-203ENST00000558855 KIR2DS1Q14954 304 aa10.55□□□□□ -0.72
VPS18-203ENST00000558855 MMDQ15546 238 aa10.55□□□□□ -0.72
VPS18-203ENST00000558855 C19orf54Q5BKX5 351 aa10.55□□□□□ -0.72
VPS18-203ENST00000558855 ZNF833PQ6ZTB9 187 aa10.55□□□□□ -0.72
VPS18-203ENST00000558855 SVOPQ8N4V2 548 aa10.55□□□□□ -0.72
VPS18-203ENST00000558855 NKAIN3Q8N8D7 197 aa10.55□□□□□ -0.72
VPS18-203ENST00000558855 CASTOR1Q8WTX7 329 aa10.55□□□□□ -0.72
VPS18-203ENST00000558855 NRG4Q8WWG1 115 aa10.55□□□□□ -0.72
VPS18-203ENST00000558855 B9D2Q9BPU9 175 aa10.55□□□□□ -0.72
VPS18-203ENST00000558855 UQCC2Q9BRT2 126 aa10.55□□□□□ -0.72
VPS18-203ENST00000558855 JPT1Q9UK76 154 aa10.55□□□□□ -0.72
VPS18-203ENST00000558855 TMEM14DPA8MWL7 114 aa10.54□□□□□ -0.72
VPS18-203ENST00000558855 TXNL1O43396 289 aa10.54□□□□□ -0.72
VPS18-203ENST00000558855 NAPSAO96009 420 aa10.54□□□□□ -0.72
VPS18-203ENST00000558855 CD37P11049 281 aa10.54□□□□□ -0.72
VPS18-203ENST00000558855 BLVRBP30043 206 aaPredicted RBP10.54□□□□□ -0.72
VPS18-203ENST00000558855 LINC00205P59089 165 aa10.54□□□□□ -0.72
VPS18-203ENST00000558855 GNB1P62873 340 aa10.54□□□□□ -0.72
VPS18-203ENST00000558855 PLA2G7Q13093 441 aa10.54□□□□□ -0.72
VPS18-203ENST00000558855 IRF3Q14653 427 aa10.54□□□□□ -0.72
VPS18-203ENST00000558855 TMEM30BQ3MIR4 351 aa10.54□□□□□ -0.72
VPS18-203ENST00000558855 RPL39P5Q59GN2 51 aa10.54□□□□□ -0.72
VPS18-203ENST00000558855 CXorf66Q5JRM2 361 aaPredicted RBP10.54□□□□□ -0.72
VPS18-203ENST00000558855 RBM48Q5RL73 367 aaKnown RBP10.54□□□□□ -0.72
VPS18-203ENST00000558855 ZNF880Q6PDB4 577 aa10.54□□□□□ -0.72
VPS18-203ENST00000558855 GLDNQ6ZMI3 551 aaPredicted RBP10.54□□□□□ -0.72
VPS18-203ENST00000558855 OR5B12Q96R08 314 aa10.54□□□□□ -0.72
VPS18-203ENST00000558855 ANKRD60Q9BZ19 345 aa10.54□□□□□ -0.72
VPS18-203ENST00000558855 ALX4Q9H161 411 aaPredicted RBP10.54□□□□□ -0.72
VPS18-203ENST00000558855 OR1A1Q9P1Q5 309 aa10.54□□□□□ -0.72
VPS18-203ENST00000558855 LSM4Q9Y4Z0 139 aaKnown RBP10.54□□□□□ -0.72
VPS18-203ENST00000558855 FOXI3A8MTJ6 420 aaPredicted RBP10.53□□□□□ -0.72
VPS18-203ENST00000558855 I3L521 148 aa10.53□□□□□ -0.72
VPS18-203ENST00000558855 SLC22A1O15245 554 aa10.53□□□□□ -0.72
VPS18-203ENST00000558855 SOCS1O15524 211 aa10.53□□□□□ -0.72
VPS18-203ENST00000558855 YPEL1O60688 119 aa10.53□□□□□ -0.72
VPS18-203ENST00000558855 PROP1O75360 226 aa10.53□□□□□ -0.72
VPS18-203ENST00000558855 CA11O75493 328 aa10.53□□□□□ -0.72
VPS18-203ENST00000558855 GLAP06280 429 aa10.53□□□□□ -0.72
VPS18-203ENST00000558855 ELANEP08246 267 aa10.53□□□□□ -0.72
VPS18-203ENST00000558855 SLC6A1P30531 599 aa10.53□□□□□ -0.72
VPS18-203ENST00000558855 HTD2P86397 168 aa10.53□□□□□ -0.72
VPS18-203ENST00000558855 DGCR2P98153 550 aa10.53□□□□□ -0.72
VPS18-203ENST00000558855 CD69Q07108 199 aa10.53□□□□□ -0.72
VPS18-203ENST00000558855 P2RY14Q15391 338 aa10.53□□□□□ -0.72
VPS18-203ENST00000558855 TRAT1Q6PIZ9 186 aa10.53□□□□□ -0.72
VPS18-203ENST00000558855 FAM131AQ6UXB0 335 aa10.53□□□□□ -0.72
VPS18-203ENST00000558855 TMEM91Q6ZNR0 172 aa10.53□□□□□ -0.72
VPS18-203ENST00000558855 OR8H1Q8NGG4 311 aa10.53□□□□□ -0.72
VPS18-203ENST00000558855 OR8U1Q8NH10 309 aa10.53□□□□□ -0.72
VPS18-203ENST00000558855 C4orf3Q8WVX3 66 aa10.53□□□□□ -0.72
VPS18-203ENST00000558855 YPEL2Q96QA6 119 aa10.53□□□□□ -0.72
VPS18-203ENST00000558855 TM2D1Q9BX74 207 aa10.53□□□□□ -0.72
VPS18-203ENST00000558855 LPAR5Q9H1C0 372 aa10.53□□□□□ -0.72
VPS18-203ENST00000558855 C8orf4Q9NR00 106 aa10.53□□□□□ -0.72
VPS18-203ENST00000558855 PARP11Q9NR21 331 aa10.53□□□□□ -0.72
VPS18-203ENST00000558855 GAB2Q9UQC2 676 aa10.53□□□□□ -0.72
VPS18-203ENST00000558855 SACSQ9NZJ4 4579 aa10.52□□□□□ -0.72
VPS18-203ENST00000558855 PTGES3LE9PB15 166 aa10.52□□□□□ -0.73
VPS18-203ENST00000558855 FCN1O00602 326 aa10.52□□□□□ -0.73
VPS18-203ENST00000558855 NBR2O15453 112 aa10.52□□□□□ -0.73
VPS18-203ENST00000558855 NDUFA3O95167 84 aa10.52□□□□□ -0.73
VPS18-203ENST00000558855 IGLV1-40P01703 118 aa10.52□□□□□ -0.73
VPS18-203ENST00000558855 HLA-DRB1P01911 266 aa10.52□□□□□ -0.73
VPS18-203ENST00000558855 UCHL1P09936 223 aa10.52□□□□□ -0.73
VPS18-203ENST00000558855 EGR2P11161 476 aaPredicted RBP10.52□□□□□ -0.73
VPS18-203ENST00000558855 VDAC1P21796 283 aa10.52□□□□□ -0.73
VPS18-203ENST00000558855 AQP4P55087 323 aa10.52□□□□□ -0.73
VPS18-203ENST00000558855 RPS25P62851 125 aaKnown RBP10.52□□□□□ -0.73
VPS18-203ENST00000558855 C5orf64Q2M2E5 130 aa10.52□□□□□ -0.73
VPS18-203ENST00000558855 STEAP3Q658P3 488 aa10.52□□□□□ -0.73
VPS18-203ENST00000558855 CEACAM19Q7Z692 300 aa10.52□□□□□ -0.73
VPS18-203ENST00000558855 ZNF491Q8N8L2 437 aa10.52□□□□□ -0.73
VPS18-203ENST00000558855 DPF1Q92782 380 aa10.52□□□□□ -0.73
VPS18-203ENST00000558855 TMEM203Q969S6 136 aa10.52□□□□□ -0.73
VPS18-203ENST00000558855 ABHD14BQ96IU4 210 aa10.52□□□□□ -0.73
VPS18-203ENST00000558855 MCRIP2Q9BUT9 160 aaKnown RBP10.52□□□□□ -0.73
VPS18-203ENST00000558855 TMEM59Q9BXS4 323 aa10.52□□□□□ -0.73
VPS18-203ENST00000558855 OR51J1Q9H342 316 aa10.52□□□□□ -0.73
VPS18-203ENST00000558855 FBXL15Q9H469 300 aa10.52□□□□□ -0.73
VPS18-203ENST00000558855 AK3Q9UIJ7 227 aa10.52□□□□□ -0.73
VPS18-203ENST00000558855 ZNF580Q9UK33 172 aa10.52□□□□□ -0.73
VPS18-203ENST00000558855 TENM3Q9P273 2699 aa10.52□□□□□ -0.73
VPS18-203ENST00000558855 IGKV1-6A0A0C4DH72 117 aa10.51□□□□□ -0.73
VPS18-203ENST00000558855 SEC14L6B5MCN3 397 aa10.51□□□□□ -0.73
VPS18-203ENST00000558855 RRP9O43818 475 aaKnown RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms