RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 CCDC107Q8WV48 283 aa6.36□□□□□ -1.39
TRAF3-205ENST00000558700 DERL3Q96Q80 235 aa6.36□□□□□ -1.39
TRAF3-205ENST00000558700 VCXQ9H320 206 aa6.36□□□□□ -1.39
TRAF3-205ENST00000558700 J3KRW8 73 aa6.35□□□□□ -1.39
TRAF3-205ENST00000558700 K7EIL1 84 aa6.35□□□□□ -1.39
TRAF3-205ENST00000558700 CRTAPO75718 401 aaPredicted RBP6.35□□□□□ -1.39
TRAF3-205ENST00000558700 HBZP02008 142 aa6.35□□□□□ -1.39
TRAF3-205ENST00000558700 MAS1P04201 325 aa6.35□□□□□ -1.39
TRAF3-205ENST00000558700 GLAP06280 429 aa6.35□□□□□ -1.39
TRAF3-205ENST00000558700 CAPGP40121 348 aa6.35□□□□□ -1.39
TRAF3-205ENST00000558700 MYCNOSP40205 109 aa6.35□□□□□ -1.39
TRAF3-205ENST00000558700 GP2P55259 537 aaKnown RBP6.35□□□□□ -1.39
TRAF3-205ENST00000558700 EGFEM1PQ0D2K5 195 aa6.35□□□□□ -1.39
TRAF3-205ENST00000558700 GPR50Q13585 617 aa6.35□□□□□ -1.39
TRAF3-205ENST00000558700 CXorf66Q5JRM2 361 aaPredicted RBP6.35□□□□□ -1.39
TRAF3-205ENST00000558700 SYT6Q5T7P8 510 aaPredicted RBP6.35□□□□□ -1.39
TRAF3-205ENST00000558700 TEX38Q6PEX7 206 aa6.35□□□□□ -1.39
TRAF3-205ENST00000558700 ZNF554Q86TJ5 538 aa6.35□□□□□ -1.39
TRAF3-205ENST00000558700 ZNF695Q8IW36 515 aa6.35□□□□□ -1.39
TRAF3-205ENST00000558700 Q8N9W7 124 aa6.35□□□□□ -1.39
TRAF3-205ENST00000558700 ZNF439Q8NDP4 499 aa6.35□□□□□ -1.39
TRAF3-205ENST00000558700 OR10V1Q8NGI7 309 aa6.35□□□□□ -1.39
TRAF3-205ENST00000558700 OR4K15Q8NH41 348 aa6.35□□□□□ -1.39
TRAF3-205ENST00000558700 TFAP2CQ92754 450 aa6.35□□□□□ -1.39
TRAF3-205ENST00000558700 GGHQ92820 318 aa6.35□□□□□ -1.39
TRAF3-205ENST00000558700 ST6GALNAC6Q969X2 333 aa6.35□□□□□ -1.39
TRAF3-205ENST00000558700 RASL11BQ9BPW5 248 aa6.35□□□□□ -1.39
TRAF3-205ENST00000558700 UQCC2Q9BRT2 126 aa6.35□□□□□ -1.39
TRAF3-205ENST00000558700 SELENOIQ9C0D9 397 aa6.35□□□□□ -1.39
TRAF3-205ENST00000558700 CST11Q9H112 138 aa6.35□□□□□ -1.39
TRAF3-205ENST00000558700 ABCG5Q9H222 651 aa6.35□□□□□ -1.39
TRAF3-205ENST00000558700 KCNIP1Q9NZI2 227 aa6.35□□□□□ -1.39
TRAF3-205ENST00000558700 ZMAT5Q9UDW3 170 aaKnown RBP6.35□□□□□ -1.39
TRAF3-205ENST00000558700 JPT1Q9UK76 154 aa6.35□□□□□ -1.39
TRAF3-205ENST00000558700 PEX16Q9Y5Y5 336 aa6.35□□□□□ -1.39
TRAF3-205ENST00000558700 A0A1W2PPK0 400 aa6.34□□□□□ -1.39
TRAF3-205ENST00000558700 SLC31A2O15432 143 aa6.34□□□□□ -1.39
TRAF3-205ENST00000558700 LANCL1O43813 399 aa6.34□□□□□ -1.39
TRAF3-205ENST00000558700 PDCD6O75340 191 aa6.34□□□□□ -1.39
TRAF3-205ENST00000558700 SC5DO75845 299 aa6.34□□□□□ -1.39
TRAF3-205ENST00000558700 UBBP0CG47 229 aa6.34□□□□□ -1.39
TRAF3-205ENST00000558700 CELP19835 753 aa6.34□□□□□ -1.39
TRAF3-205ENST00000558700 FUT3P21217 361 aa6.34□□□□□ -1.39
TRAF3-205ENST00000558700 VDAC1P21796 283 aa6.34□□□□□ -1.39
TRAF3-205ENST00000558700 HOXD3P31249 432 aaPredicted RBP6.34□□□□□ -1.39
TRAF3-205ENST00000558700 SOX6P35712 828 aa6.34□□□□□ -1.39
TRAF3-205ENST00000558700 FOXE3Q13461 319 aa6.34□□□□□ -1.39
TRAF3-205ENST00000558700 MMDQ15546 238 aa6.34□□□□□ -1.39
TRAF3-205ENST00000558700 PNLIPRP3Q17RR3 467 aa6.34□□□□□ -1.39
TRAF3-205ENST00000558700 GAPTQ8N292 157 aa6.34□□□□□ -1.39
TRAF3-205ENST00000558700 FAM71E2Q8N5Q1 922 aa6.34□□□□□ -1.39
TRAF3-205ENST00000558700 TMEM104Q8NE00 496 aa6.34□□□□□ -1.39
TRAF3-205ENST00000558700 OR8U1Q8NH10 309 aa6.34□□□□□ -1.39
TRAF3-205ENST00000558700 S1PR3Q99500 378 aa6.34□□□□□ -1.39
TRAF3-205ENST00000558700 P2RX4Q99571 388 aa6.34□□□□□ -1.39
TRAF3-205ENST00000558700 ABHD14AQ9BUJ0 271 aa6.34□□□□□ -1.39
TRAF3-205ENST00000558700 BANF2Q9H503 90 aa6.34□□□□□ -1.39
TRAF3-205ENST00000558700 PLCXD1Q9NUJ7 323 aa6.34□□□□□ -1.39
TRAF3-205ENST00000558700 GHRLQ9UBU3 117 aa6.34□□□□□ -1.39
TRAF3-205ENST00000558700 PSORS1C1Q9UIG5 152 aa6.34□□□□□ -1.39
TRAF3-205ENST00000558700 LINC00527Q9UJ94 153 aa6.34□□□□□ -1.39
TRAF3-205ENST00000558700 ZNF580Q9UK33 172 aa6.34□□□□□ -1.39
TRAF3-205ENST00000558700 ERGIC3Q9Y282 383 aa6.34□□□□□ -1.39
TRAF3-205ENST00000558700 UBE2QL1A1L167 161 aa6.33□□□□□ -1.4
TRAF3-205ENST00000558700 H0YHG0 523 aa6.33□□□□□ -1.4
TRAF3-205ENST00000558700 CCL24O00175 119 aa6.33□□□□□ -1.4
TRAF3-205ENST00000558700 RGS11O94810 467 aa6.33□□□□□ -1.4
TRAF3-205ENST00000558700 ELANEP08246 267 aa6.33□□□□□ -1.4
TRAF3-205ENST00000558700 GNAO1P09471 354 aa6.33□□□□□ -1.4
TRAF3-205ENST00000558700 OR5H8P0DN80 308 aa6.33□□□□□ -1.4
TRAF3-205ENST00000558700 RCC1P18754 421 aaPredicted RBP6.33□□□□□ -1.4
TRAF3-205ENST00000558700 RAB25P57735 213 aa6.33□□□□□ -1.4
TRAF3-205ENST00000558700 KRTAP10-11P60412 298 aa6.33□□□□□ -1.4
TRAF3-205ENST00000558700 GABPB1Q06547 395 aaPredicted RBP6.33□□□□□ -1.4
TRAF3-205ENST00000558700 CT45A1Q5HYN5 189 aa6.33□□□□□ -1.4
TRAF3-205ENST00000558700 RBM48Q5RL73 367 aaKnown RBP6.33□□□□□ -1.4
TRAF3-205ENST00000558700 FAM53AQ6NSI3 398 aaPredicted RBP6.33□□□□□ -1.4
TRAF3-205ENST00000558700 UNQ9370/PRO34162Q6UXP9 181 aa6.33□□□□□ -1.4
TRAF3-205ENST00000558700 C18orf65Q6ZTR6 163 aa6.33□□□□□ -1.4
TRAF3-205ENST00000558700 MOB1BQ7L9L4 216 aa6.33□□□□□ -1.4
TRAF3-205ENST00000558700 BPIFB6Q8NFQ5 453 aa6.33□□□□□ -1.4
TRAF3-205ENST00000558700 OR5M8Q8NGP6 311 aa6.33□□□□□ -1.4
TRAF3-205ENST00000558700 OR1L1Q8NH94 360 aa6.33□□□□□ -1.4
TRAF3-205ENST00000558700 CT45A3Q8NHU0 189 aa6.33□□□□□ -1.4
TRAF3-205ENST00000558700 MRPL30Q8TCC3 161 aaKnown RBP6.33□□□□□ -1.4
TRAF3-205ENST00000558700 PHYHIPQ92561 330 aa6.33□□□□□ -1.4
TRAF3-205ENST00000558700 FAM46BQ96A09 425 aa6.33□□□□□ -1.4
TRAF3-205ENST00000558700 NEDD4LQ96PU5 975 aa6.33□□□□□ -1.4
TRAF3-205ENST00000558700 MND1Q9BWT6 205 aa6.33□□□□□ -1.4
TRAF3-205ENST00000558700 TMEM59Q9BXS4 323 aa6.33□□□□□ -1.4
TRAF3-205ENST00000558700 TAF9BQ9HBM6 251 aa6.33□□□□□ -1.4
TRAF3-205ENST00000558700 OR2S2Q9NQN1 319 aa6.33□□□□□ -1.4
TRAF3-205ENST00000558700 ABRACLQ9P1F3 81 aa6.33□□□□□ -1.4
TRAF3-205ENST00000558700 ZNF107Q9UII5 783 aaPredicted RBP6.33□□□□□ -1.4
TRAF3-205ENST00000558700 WI2-2373I1.2A0A1W2PRP0 233 aa6.32□□□□□ -1.4
TRAF3-205ENST00000558700 CASQ2O14958 399 aaPredicted RBP6.32□□□□□ -1.4
TRAF3-205ENST00000558700 MYF6P23409 242 aa6.32□□□□□ -1.4
TRAF3-205ENST00000558700 CHATP28329 748 aa6.32□□□□□ -1.4
TRAF3-205ENST00000558700 PPP1CCP36873 323 aaKnown RBP6.32□□□□□ -1.4
TRAF3-205ENST00000558700 HTD2P86397 168 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms