RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 NABP2Q9BQ15 211 aa3.94□□□□□ -1.78
SPG11-208ENST00000558155 NEURL2Q9BR09 285 aa3.94□□□□□ -1.78
SPG11-208ENST00000558155 PLEKHA3Q9HB20 300 aa3.94□□□□□ -1.78
SPG11-208ENST00000558155 ZNF355PQ9NSJ1 428 aa3.94□□□□□ -1.78
SPG11-208ENST00000558155 SIGLEC8Q9NYZ4 499 aa3.94□□□□□ -1.78
SPG11-208ENST00000558155 CNOT2Q9NZN8 540 aaKnown RBP3.94□□□□□ -1.78
SPG11-208ENST00000558155 GNG8Q9UK08 70 aa3.94□□□□□ -1.78
SPG11-208ENST00000558155 PAIP2BQ9ULR5 123 aaKnown RBP3.94□□□□□ -1.78
SPG11-208ENST00000558155 ST3GAL6Q9Y274 331 aa3.94□□□□□ -1.78
SPG11-208ENST00000558155 A3GALT2U3KPV4 340 aa3.94□□□□□ -1.78
SPG11-208ENST00000558155 ANKRD34BA5PLL1 514 aa3.93□□□□□ -1.78
SPG11-208ENST00000558155 OR11H12B2RN74 326 aa3.93□□□□□ -1.78
SPG11-208ENST00000558155 RRHO14718 337 aa3.93□□□□□ -1.78
SPG11-208ENST00000558155 SLC31A2O15432 143 aa3.93□□□□□ -1.78
SPG11-208ENST00000558155 SULT1B1O43704 296 aa3.93□□□□□ -1.78
SPG11-208ENST00000558155 AIREO43918 545 aa3.93□□□□□ -1.78
SPG11-208ENST00000558155 OR7C1O76099 320 aaPredicted RBP3.93□□□□□ -1.78
SPG11-208ENST00000558155 TFAP2AP05549 437 aa3.93□□□□□ -1.78
SPG11-208ENST00000558155 CSN3P07498 182 aa3.93□□□□□ -1.78
SPG11-208ENST00000558155 HTR1AP08908 422 aa3.93□□□□□ -1.78
SPG11-208ENST00000558155 GSTP1P09211 210 aaKnown RBP3.93□□□□□ -1.78
SPG11-208ENST00000558155 BTF3P20290 206 aaKnown RBP3.93□□□□□ -1.78
SPG11-208ENST00000558155 RANBP1P43487 201 aa3.93□□□□□ -1.78
SPG11-208ENST00000558155 MECP2P51608 486 aaKnown RBP3.93□□□□□ -1.78
SPG11-208ENST00000558155 SYNJ2BPP57105 145 aa3.93□□□□□ -1.78
SPG11-208ENST00000558155 CD81P60033 236 aa3.93□□□□□ -1.78
SPG11-208ENST00000558155 EFNB1P98172 346 aa3.93□□□□□ -1.78
SPG11-208ENST00000558155 MS4A2Q01362 244 aa3.93□□□□□ -1.78
SPG11-208ENST00000558155 PMS2P11Q13670 270 aa3.93□□□□□ -1.78
SPG11-208ENST00000558155 LRRC36Q1X8D7 754 aa3.93□□□□□ -1.78
SPG11-208ENST00000558155 PIGYQ3MUY2 71 aa3.93□□□□□ -1.78
SPG11-208ENST00000558155 MORN2Q502X0 79 aa3.93□□□□□ -1.78
SPG11-208ENST00000558155 TP53I3Q53FA7 332 aa3.93□□□□□ -1.78
SPG11-208ENST00000558155 C19orf54Q5BKX5 351 aa3.93□□□□□ -1.78
SPG11-208ENST00000558155 ATAD3CQ5T2N8 411 aa3.93□□□□□ -1.78
SPG11-208ENST00000558155 C6orf183Q5T699 404 aa3.93□□□□□ -1.78
SPG11-208ENST00000558155 SYT6Q5T7P8 510 aaPredicted RBP3.93□□□□□ -1.78
SPG11-208ENST00000558155 THOC7Q6I9Y2 204 aaKnown RBP3.93□□□□□ -1.78
SPG11-208ENST00000558155 FDX2Q6P4F2 183 aa3.93□□□□□ -1.78
SPG11-208ENST00000558155 TRAT1Q6PIZ9 186 aa3.93□□□□□ -1.78
SPG11-208ENST00000558155 ZNF562Q6V9R5 426 aa3.93□□□□□ -1.78
SPG11-208ENST00000558155 ASCL4Q6XD76 172 aa3.93□□□□□ -1.78
SPG11-208ENST00000558155 IL34Q6ZMJ4 242 aa3.93□□□□□ -1.78
SPG11-208ENST00000558155 LINC00596Q86U02 117 aa3.93□□□□□ -1.78
SPG11-208ENST00000558155 HS3ST5Q8IZT8 346 aa3.93□□□□□ -1.78
SPG11-208ENST00000558155 RPP25LQ8N5L8 163 aaKnown RBP3.93□□□□□ -1.78
SPG11-208ENST00000558155 LINC00469Q8N7U9 141 aa3.93□□□□□ -1.78
SPG11-208ENST00000558155 ZNF439Q8NDP4 499 aa3.93□□□□□ -1.78
SPG11-208ENST00000558155 LFNGQ8NES3 379 aa3.93□□□□□ -1.78
SPG11-208ENST00000558155 OR10V1Q8NGI7 309 aa3.93□□□□□ -1.78
SPG11-208ENST00000558155 OR52N1Q8NH53 320 aa3.93□□□□□ -1.78
SPG11-208ENST00000558155 UBALD1Q8TB05 177 aa3.93□□□□□ -1.78
SPG11-208ENST00000558155 TNFAIP8L1Q8WVP5 186 aa3.93□□□□□ -1.78
SPG11-208ENST00000558155 MRPS24Q96EL2 167 aaKnown RBP3.93□□□□□ -1.78
SPG11-208ENST00000558155 IL4I1Q96RQ9 567 aa3.93□□□□□ -1.78
SPG11-208ENST00000558155 S100A13Q99584 98 aa3.93□□□□□ -1.78
SPG11-208ENST00000558155 THAP7Q9BT49 309 aaPredicted RBP3.93□□□□□ -1.78
SPG11-208ENST00000558155 JAM3Q9BX67 310 aa3.93□□□□□ -1.78
SPG11-208ENST00000558155 MRPL18Q9H0U6 180 aaKnown RBP3.93□□□□□ -1.78
SPG11-208ENST00000558155 METTL9Q9H1A3 318 aa3.93□□□□□ -1.78
SPG11-208ENST00000558155 IFT22Q9H7X7 185 aa3.93□□□□□ -1.78
SPG11-208ENST00000558155 PAK1IP1Q9NWT1 392 aaPredicted RBP3.93□□□□□ -1.78
SPG11-208ENST00000558155 KCNIP1Q9NZI2 227 aa3.93□□□□□ -1.78
SPG11-208ENST00000558155 PEMTQ9UBM1 199 aa3.93□□□□□ -1.78
SPG11-208ENST00000558155 TRAPPC2LQ9UL33 140 aa3.93□□□□□ -1.78
SPG11-208ENST00000558155 ING4Q9UNL4 249 aa3.93□□□□□ -1.78
SPG11-208ENST00000558155 MUC4Q99102 2169 aa3.92□□□□□ -1.78
SPG11-208ENST00000558155 DAPL1A0PJW8 107 aa3.92□□□□□ -1.78
SPG11-208ENST00000558155 IZUMO1RA6ND01 250 aa3.92□□□□□ -1.78
SPG11-208ENST00000558155 AQP12BA6NM10 295 aa3.92□□□□□ -1.78
SPG11-208ENST00000558155 ZNF785A8K8V0 405 aa3.92□□□□□ -1.78
SPG11-208ENST00000558155 B2RBV5 119 aa3.92□□□□□ -1.78
SPG11-208ENST00000558155 MCRIP1C9JLW8 97 aa3.92□□□□□ -1.78
SPG11-208ENST00000558155 H3BUA1 57 aa3.92□□□□□ -1.78
SPG11-208ENST00000558155 AIPO00170 330 aa3.92□□□□□ -1.78
SPG11-208ENST00000558155 FCN1O00602 326 aa3.92□□□□□ -1.78
SPG11-208ENST00000558155 MITFO75030 526 aaPredicted RBP3.92□□□□□ -1.78
SPG11-208ENST00000558155 NDUFA3O95167 84 aa3.92□□□□□ -1.78
SPG11-208ENST00000558155 NDUFB8O95169 186 aa3.92□□□□□ -1.78
SPG11-208ENST00000558155 HBZP02008 142 aa3.92□□□□□ -1.78
SPG11-208ENST00000558155 EGR2P11161 476 aaPredicted RBP3.92□□□□□ -1.78
SPG11-208ENST00000558155 RAB3AP20336 220 aa3.92□□□□□ -1.78
SPG11-208ENST00000558155 AADACP22760 399 aa3.92□□□□□ -1.78
SPG11-208ENST00000558155 MC5RP33032 325 aa3.92□□□□□ -1.78
SPG11-208ENST00000558155 DAPP51397 102 aa3.92□□□□□ -1.78
SPG11-208ENST00000558155 ZNF85Q03923 595 aa3.92□□□□□ -1.78
SPG11-208ENST00000558155 RPEL1Q2QD12 228 aa3.92□□□□□ -1.78
SPG11-208ENST00000558155 MPV17LQ2QL34 196 aa3.92□□□□□ -1.78
SPG11-208ENST00000558155 NHLRC3Q5JS37 347 aa3.92□□□□□ -1.78
SPG11-208ENST00000558155 LGALS9CQ6DKI2 356 aa3.92□□□□□ -1.78
SPG11-208ENST00000558155 ZNF497Q6ZNH5 498 aa3.92□□□□□ -1.78
SPG11-208ENST00000558155 AQP12AQ8IXF9 295 aa3.92□□□□□ -1.78
SPG11-208ENST00000558155 ADGRG5Q8IZF4 528 aa3.92□□□□□ -1.78
SPG11-208ENST00000558155 PRR18Q8N4B5 295 aa3.92□□□□□ -1.78
SPG11-208ENST00000558155 PARP16Q8N5Y8 322 aa3.92□□□□□ -1.78
SPG11-208ENST00000558155 DEFB125Q8N687 156 aa3.92□□□□□ -1.78
SPG11-208ENST00000558155 OR10K1Q8NGX5 313 aa3.92□□□□□ -1.78
SPG11-208ENST00000558155 OR10AC1Q8NH08 325 aa3.92□□□□□ -1.78
SPG11-208ENST00000558155 CANT1Q8WVQ1 401 aa3.92□□□□□ -1.78
SPG11-208ENST00000558155 SNAPC3Q92966 411 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms