RNA–Protein interactions for RNA: ENST00000557845.1

NEDD4-212, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-212ENST00000557845 RBMXL1Q96E39 390 aaKnown RBP13.21□□□□□ -0.29
NEDD4-212ENST00000557845 ABHD14AQ9BUJ0 271 aa13.21□□□□□ -0.29
NEDD4-212ENST00000557845 RIMS4Q9H426 269 aaPredicted RBP13.21□□□□□ -0.29
NEDD4-212ENST00000557845 CHMP1AQ9HD42 196 aaPredicted RBP13.21□□□□□ -0.29
NEDD4-212ENST00000557845 LIN7CQ9NUP9 197 aaKnown RBP13.21□□□□□ -0.29
NEDD4-212ENST00000557845 ABRACLQ9P1F3 81 aa13.21□□□□□ -0.29
NEDD4-212ENST00000557845 V9GY05 133 aa13.21□□□□□ -0.29
NEDD4-212ENST00000557845 PF4V1P10720 104 aa13.2□□□□□ -0.3
NEDD4-212ENST00000557845 RANBP1P43487 201 aa13.2□□□□□ -0.3
NEDD4-212ENST00000557845 F2RL1P55085 397 aa13.2□□□□□ -0.3
NEDD4-212ENST00000557845 TMEM50BP56557 158 aa13.2□□□□□ -0.3
NEDD4-212ENST00000557845 OXLD1Q5BKU9 147 aa13.2□□□□□ -0.3
NEDD4-212ENST00000557845 KPRPQ5T749 579 aaPredicted RBP13.2□□□□□ -0.3
NEDD4-212ENST00000557845 SVOPQ8N4V2 548 aa13.2□□□□□ -0.3
NEDD4-212ENST00000557845 WFDC9Q8NEX5 89 aa13.2□□□□□ -0.3
NEDD4-212ENST00000557845 SETD6Q8TBK2 473 aa13.2□□□□□ -0.3
NEDD4-212ENST00000557845 FAM3DQ96BQ1 224 aa13.2□□□□□ -0.3
NEDD4-212ENST00000557845 S1PR3Q99500 378 aa13.2□□□□□ -0.3
NEDD4-212ENST00000557845 ABCG5Q9H222 651 aa13.2□□□□□ -0.3
NEDD4-212ENST00000557845 AK3Q9UIJ7 227 aa13.2□□□□□ -0.3
NEDD4-212ENST00000557845 LINC00527Q9UJ94 153 aa13.2□□□□□ -0.3
NEDD4-212ENST00000557845 HSF4Q9ULV5 492 aa13.2□□□□□ -0.3
NEDD4-212ENST00000557845 TRBV6-6A0A0A6YYG2 114 aa13.19□□□□□ -0.3
NEDD4-212ENST00000557845 FOXI3A8MTJ6 420 aaPredicted RBP13.19□□□□□ -0.3
NEDD4-212ENST00000557845 MRPS14O60783 128 aaKnown RBP13.19□□□□□ -0.3
NEDD4-212ENST00000557845 VEGFCP49767 419 aa13.19□□□□□ -0.3
NEDD4-212ENST00000557845 GABARAPL2P60520 117 aa13.19□□□□□ -0.3
NEDD4-212ENST00000557845 LSAMPQ13449 338 aa13.19□□□□□ -0.3
NEDD4-212ENST00000557845 KHDC1LQ5JSQ8 128 aa13.19□□□□□ -0.3
NEDD4-212ENST00000557845 FOXRED2Q8IWF2 684 aa13.19□□□□□ -0.3
NEDD4-212ENST00000557845 OR8H1Q8NGG4 311 aa13.19□□□□□ -0.3
NEDD4-212ENST00000557845 IL1F10Q8WWZ1 152 aa13.19□□□□□ -0.3
NEDD4-212ENST00000557845 RASL11BQ9BPW5 248 aa13.19□□□□□ -0.3
NEDD4-212ENST00000557845 TRAV1-2A0A0B4J238 106 aa13.18□□□□□ -0.3
NEDD4-212ENST00000557845 PDCD5O14737 125 aa13.18□□□□□ -0.3
NEDD4-212ENST00000557845 LDLRAD4O15165 306 aa13.18□□□□□ -0.3
NEDD4-212ENST00000557845 DENRO43583 198 aaKnown RBP13.18□□□□□ -0.3
NEDD4-212ENST00000557845 CD33P20138 364 aa13.18□□□□□ -0.3
NEDD4-212ENST00000557845 GPR12P47775 334 aa13.18□□□□□ -0.3
NEDD4-212ENST00000557845 SLC35B1P78383 322 aa13.18□□□□□ -0.3
NEDD4-212ENST00000557845 HES5Q5TA89 166 aa13.18□□□□□ -0.3
NEDD4-212ENST00000557845 CD200R1LQ6Q8B3 271 aa13.18□□□□□ -0.3
NEDD4-212ENST00000557845 STPG2Q8N412 459 aa13.18□□□□□ -0.3
NEDD4-212ENST00000557845 OR2AK2Q8NG84 335 aa13.18□□□□□ -0.3
NEDD4-212ENST00000557845 ARHGAP5-AS1Q96IT6 56 aa13.18□□□□□ -0.3
NEDD4-212ENST00000557845 NABP2Q9BQ15 211 aa13.18□□□□□ -0.3
NEDD4-212ENST00000557845 HDHD3Q9BSH5 251 aaPredicted RBP13.18□□□□□ -0.3
NEDD4-212ENST00000557845 PECRQ9BY49 303 aa13.18□□□□□ -0.3
NEDD4-212ENST00000557845 NDUFB11Q9NX14 153 aa13.18□□□□□ -0.3
NEDD4-212ENST00000557845 STEAP1Q9UHE8 339 aa13.18□□□□□ -0.3
NEDD4-212ENST00000557845 TMEM272A0A1B0GTI8 110 aa13.17□□□□□ -0.3
NEDD4-212ENST00000557845 TRDV1A0A1B0GX56 115 aa13.17□□□□□ -0.3
NEDD4-212ENST00000557845 SHISA3A0PJX4 238 aa13.17□□□□□ -0.3
NEDD4-212ENST00000557845 AP4M1O00189 453 aa13.17□□□□□ -0.3
NEDD4-212ENST00000557845 OR3A3P47888 321 aa13.17□□□□□ -0.3
NEDD4-212ENST00000557845 ZNF833PQ6ZTB9 187 aa13.17□□□□□ -0.3
NEDD4-212ENST00000557845 MOB1BQ7L9L4 216 aa13.17□□□□□ -0.3
NEDD4-212ENST00000557845 FAM71E2Q8N5Q1 922 aa13.17□□□□□ -0.3
NEDD4-212ENST00000557845 OR56B1Q8NGI3 324 aa13.17□□□□□ -0.3
NEDD4-212ENST00000557845 RAB22AQ9UL26 194 aa13.17□□□□□ -0.3
NEDD4-212ENST00000557845 SAA2-SAA4A0A096LPE2 208 aa13.16□□□□□ -0.3
NEDD4-212ENST00000557845 PF4P02776 101 aa13.16□□□□□ -0.3
NEDD4-212ENST00000557845 SAA2P0DJI9 122 aaPredicted RBP13.16□□□□□ -0.3
NEDD4-212ENST00000557845 GALP22466 123 aa13.16□□□□□ -0.3
NEDD4-212ENST00000557845 OR10A3P58181 314 aa13.16□□□□□ -0.3
NEDD4-212ENST00000557845 PLA2G7Q13093 441 aa13.16□□□□□ -0.3
NEDD4-212ENST00000557845 PLAC9Q5JTB6 97 aa13.16□□□□□ -0.3
NEDD4-212ENST00000557845 SPARTQ8N0X7 666 aa13.16□□□□□ -0.3
NEDD4-212ENST00000557845 COMMD1Q8N668 190 aa13.16□□□□□ -0.3
NEDD4-212ENST00000557845 MRPL20Q9BYC9 149 aaKnown RBP13.16□□□□□ -0.3
NEDD4-212ENST00000557845 YTHDF1Q9BYJ9 559 aaKnown RBP13.16□□□□□ -0.3
NEDD4-212ENST00000557845 IFI27L2Q9H2X8 130 aa13.16□□□□□ -0.3
NEDD4-212ENST00000557845 Q9H521 79 aa13.16□□□□□ -0.3
NEDD4-212ENST00000557845 Q9N2K0 584 aa13.16□□□□□ -0.3
NEDD4-212ENST00000557845 ZFP57Q9NU63 452 aa13.16□□□□□ -0.3
NEDD4-212ENST00000557845 PIPOXQ9P0Z9 390 aa13.16□□□□□ -0.3
NEDD4-212ENST00000557845 MGAT4AQ9UM21 535 aa13.16□□□□□ -0.3
NEDD4-212ENST00000557845 NOTCH1P46531 2555 aa13.16□□□□□ -0.3
NEDD4-212ENST00000557845 IFITM5A6NNB3 132 aa13.15□□□□□ -0.3
NEDD4-212ENST00000557845 RAB29O14966 203 aa13.15□□□□□ -0.3
NEDD4-212ENST00000557845 ST8SIA5O15466 376 aa13.15□□□□□ -0.3
NEDD4-212ENST00000557845 SCTP09683 121 aa13.15□□□□□ -0.3
NEDD4-212ENST00000557845 IGLL1P15814 213 aa13.15□□□□□ -0.3
NEDD4-212ENST00000557845 RAB3BP20337 219 aa13.15□□□□□ -0.3
NEDD4-212ENST00000557845 ZBTB25P24278 435 aa13.15□□□□□ -0.3
NEDD4-212ENST00000557845 MYL9P24844 172 aa13.15□□□□□ -0.3
NEDD4-212ENST00000557845 SOX6P35712 828 aa13.15□□□□□ -0.3
NEDD4-212ENST00000557845 CEACAM6P40199 344 aa13.15□□□□□ -0.3
NEDD4-212ENST00000557845 RPL23AP62750 156 aaKnown RBP13.15□□□□□ -0.3
NEDD4-212ENST00000557845 PNLIPRP3Q17RR3 467 aa13.15□□□□□ -0.3
NEDD4-212ENST00000557845 UBE2UQ5VVX9 321 aa13.15□□□□□ -0.3
NEDD4-212ENST00000557845 FAM71F2Q6NXP2 309 aa13.15□□□□□ -0.3
NEDD4-212ENST00000557845 TEX38Q6PEX7 206 aa13.15□□□□□ -0.3
NEDD4-212ENST00000557845 RITA1Q96K30 269 aa13.15□□□□□ -0.3
NEDD4-212ENST00000557845 CMSS1Q9BQ75 279 aaKnown RBP13.15□□□□□ -0.3
NEDD4-212ENST00000557845 HSPB9Q9BQS6 159 aa13.15□□□□□ -0.3
NEDD4-212ENST00000557845 ZNF251Q9BRH9 671 aa13.15□□□□□ -0.3
NEDD4-212ENST00000557845 GON7Q9BXV9 100 aa13.15□□□□□ -0.3
NEDD4-212ENST00000557845 C12orf4Q9NQ89 552 aa13.15□□□□□ -0.3
NEDD4-212ENST00000557845 SLC23A1Q9UHI7 598 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms