RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 CLEC2LP0C7M8 214 aa10□□□□□ -0.81
SLIRP-209ENST00000557342 SNRPBP14678 240 aaKnown RBP10□□□□□ -0.81
SLIRP-209ENST00000557342 GNB3P16520 340 aa10□□□□□ -0.81
SLIRP-209ENST00000557342 ZBTB25P24278 435 aa10□□□□□ -0.81
SLIRP-209ENST00000557342 PPP1CCP36873 323 aaKnown RBP10□□□□□ -0.81
SLIRP-209ENST00000557342 ZNF134P52741 427 aa10□□□□□ -0.81
SLIRP-209ENST00000557342 DIAPH2-AS1Q14236 149 aa10□□□□□ -0.81
SLIRP-209ENST00000557342 HABP2Q14520 560 aaPredicted RBP10□□□□□ -0.81
SLIRP-209ENST00000557342 GNMTQ14749 295 aa10□□□□□ -0.81
SLIRP-209ENST00000557342 ARSJQ5FYB0 599 aaPredicted RBP10□□□□□ -0.81
SLIRP-209ENST00000557342 IDNKQ5T6J7 187 aa10□□□□□ -0.81
SLIRP-209ENST00000557342 FAM53AQ6NSI3 398 aaPredicted RBP10□□□□□ -0.81
SLIRP-209ENST00000557342 MOB3BQ86TA1 216 aa10□□□□□ -0.81
SLIRP-209ENST00000557342 TGIF2LXQ8IUE1 241 aa10□□□□□ -0.81
SLIRP-209ENST00000557342 LYG1Q8N1E2 194 aa10□□□□□ -0.81
SLIRP-209ENST00000557342 DRAM1Q8N682 238 aa10□□□□□ -0.81
SLIRP-209ENST00000557342 OR2AK2Q8NG84 335 aa10□□□□□ -0.81
SLIRP-209ENST00000557342 LGALS14Q8TCE9 139 aa10□□□□□ -0.81
SLIRP-209ENST00000557342 RTN4IP1Q8WWV3 396 aaPredicted RBP10□□□□□ -0.81
SLIRP-209ENST00000557342 CFHR4Q92496 578 aa10□□□□□ -0.81
SLIRP-209ENST00000557342 ST6GALNAC6Q969X2 333 aa10□□□□□ -0.81
SLIRP-209ENST00000557342 PHF21AQ96BD5 680 aa10□□□□□ -0.81
SLIRP-209ENST00000557342 RBM38Q9H0Z9 239 aaKnown RBP10□□□□□ -0.81
SLIRP-209ENST00000557342 ZNF702PQ9H963 129 aa10□□□□□ -0.81
SLIRP-209ENST00000557342 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10□□□□□ -0.81
SLIRP-209ENST00000557342 KCNK7Q9Y2U2 307 aa10□□□□□ -0.81
SLIRP-209ENST00000557342 A0A075B6Q4 140 aa9.99□□□□□ -0.81
SLIRP-209ENST00000557342 TRDCB7Z8K6 153 aa9.99□□□□□ -0.81
SLIRP-209ENST00000557342 ITGB1BP1O14713 200 aa9.99□□□□□ -0.81
SLIRP-209ENST00000557342 HSPA12AO43301 675 aa9.99□□□□□ -0.81
SLIRP-209ENST00000557342 LANCL1O43813 399 aa9.99□□□□□ -0.81
SLIRP-209ENST00000557342 TMEM11P17152 192 aa9.99□□□□□ -0.81
SLIRP-209ENST00000557342 CD1BP29016 333 aa9.99□□□□□ -0.81
SLIRP-209ENST00000557342 TALDO1P37837 337 aa9.99□□□□□ -0.81
SLIRP-209ENST00000557342 ARFRP1Q13795 201 aa9.99□□□□□ -0.81
SLIRP-209ENST00000557342 HES1Q14469 280 aa9.99□□□□□ -0.81
SLIRP-209ENST00000557342 KIR2DS1Q14954 304 aa9.99□□□□□ -0.81
SLIRP-209ENST00000557342 Q6ZPA2 131 aa9.99□□□□□ -0.81
SLIRP-209ENST00000557342 IZUMO1Q8IYV9 350 aa9.99□□□□□ -0.81
SLIRP-209ENST00000557342 EDARADDQ8WWZ3 215 aa9.99□□□□□ -0.81
SLIRP-209ENST00000557342 CITED1Q99966 193 aa9.99□□□□□ -0.81
SLIRP-209ENST00000557342 GHITMQ9H3K2 345 aa9.99□□□□□ -0.81
SLIRP-209ENST00000557342 PIPOXQ9P0Z9 390 aa9.99□□□□□ -0.81
SLIRP-209ENST00000557342 MOB4Q9Y3A3 225 aa9.99□□□□□ -0.81
SLIRP-209ENST00000557342 PEX14O75381 377 aa9.98□□□□□ -0.81
SLIRP-209ENST00000557342 IGKV1D-33P01593 117 aa9.98□□□□□ -0.81
SLIRP-209ENST00000557342 IGKV1-33P01594 117 aa9.98□□□□□ -0.81
SLIRP-209ENST00000557342 FCGR3AP08637 254 aa9.98□□□□□ -0.81
SLIRP-209ENST00000557342 SCTP09683 121 aa9.98□□□□□ -0.81
SLIRP-209ENST00000557342 REG1BP48304 166 aa9.98□□□□□ -0.81
SLIRP-209ENST00000557342 SERPINB10P48595 397 aa9.98□□□□□ -0.81
SLIRP-209ENST00000557342 LSM3P62310 102 aaKnown RBP9.98□□□□□ -0.81
SLIRP-209ENST00000557342 BLCAPP62952 87 aa9.98□□□□□ -0.81
SLIRP-209ENST00000557342 PITPNAQ00169 270 aa9.98□□□□□ -0.81
SLIRP-209ENST00000557342 EBI3Q14213 229 aa9.98□□□□□ -0.81
SLIRP-209ENST00000557342 SRSF7Q16629 238 aaKnown RBP eCLIP9.98□□□□□ -0.81
SLIRP-209ENST00000557342 C5orf24Q7Z6I8 188 aa9.98□□□□□ -0.81
SLIRP-209ENST00000557342 OR4A4PQ8NGN8 299 aa9.98□□□□□ -0.81
SLIRP-209ENST00000557342 OR2T10Q8NGZ9 312 aa9.98□□□□□ -0.81
SLIRP-209ENST00000557342 BCL7BQ9BQE9 202 aa9.98□□□□□ -0.81
SLIRP-209ENST00000557342 FUNDC2Q9BWH2 189 aa9.98□□□□□ -0.81
SLIRP-209ENST00000557342 RHBDL2Q9NX52 303 aa9.98□□□□□ -0.81
SLIRP-209ENST00000557342 SLC23A1Q9UHI7 598 aa9.98□□□□□ -0.81
SLIRP-209ENST00000557342 SIGLEC9Q9Y336 463 aa9.98□□□□□ -0.81
SLIRP-209ENST00000557342 TET2Q6N021 2002 aaPredicted RBP9.98□□□□□ -0.81
SLIRP-209ENST00000557342 A0A0A6YYH2 397 aa9.97□□□□□ -0.81
SLIRP-209ENST00000557342 A6NJ64 397 aa9.97□□□□□ -0.81
SLIRP-209ENST00000557342 ZNF701M0R085 212 aaPredicted RBP9.97□□□□□ -0.81
SLIRP-209ENST00000557342 RAB29O14966 203 aa9.97□□□□□ -0.81
SLIRP-209ENST00000557342 FGF16O43320 207 aa9.97□□□□□ -0.81
SLIRP-209ENST00000557342 GABARAPO95166 117 aa9.97□□□□□ -0.81
SLIRP-209ENST00000557342 DIRAS3O95661 229 aa9.97□□□□□ -0.81
SLIRP-209ENST00000557342 GSTP1P09211 210 aaKnown RBP9.97□□□□□ -0.81
SLIRP-209ENST00000557342 DTYMKP23919 212 aa9.97□□□□□ -0.81
SLIRP-209ENST00000557342 CEACAM6P40199 344 aa9.97□□□□□ -0.81
SLIRP-209ENST00000557342 VDAC2P45880 294 aaPredicted RBP9.97□□□□□ -0.81
SLIRP-209ENST00000557342 HERPUD1Q15011 391 aa9.97□□□□□ -0.81
SLIRP-209ENST00000557342 PNLIPRP3Q17RR3 467 aa9.97□□□□□ -0.81
SLIRP-209ENST00000557342 CDNFQ49AH0 187 aa9.97□□□□□ -0.81
SLIRP-209ENST00000557342 HACD4Q5VWC8 232 aa9.97□□□□□ -0.81
SLIRP-209ENST00000557342 FAM71F2Q6NXP2 309 aa9.97□□□□□ -0.81
SLIRP-209ENST00000557342 ANKRD13BQ86YJ7 626 aa9.97□□□□□ -0.81
SLIRP-209ENST00000557342 SERTAD4Q9NUC0 356 aa9.97□□□□□ -0.81
SLIRP-209ENST00000557342 SPATA2Q9UM82 520 aa9.97□□□□□ -0.81
SLIRP-209ENST00000557342 CEPT1Q9Y6K0 416 aa9.97□□□□□ -0.81
SLIRP-209ENST00000557342 IGHV3-72A0A0B4J1Y9 119 aa9.96□□□□□ -0.82
SLIRP-209ENST00000557342 FABP7O15540 132 aa9.96□□□□□ -0.82
SLIRP-209ENST00000557342 MOSP00540 346 aa9.96□□□□□ -0.82
SLIRP-209ENST00000557342 VSIG10L2P0DP72 767 aa9.96□□□□□ -0.82
SLIRP-209ENST00000557342 TGFBR1P36897 503 aa9.96□□□□□ -0.82
SLIRP-209ENST00000557342 RPS19P39019 145 aaKnown RBP9.96□□□□□ -0.82
SLIRP-209ENST00000557342 TMBIM6P55061 237 aa9.96□□□□□ -0.82
SLIRP-209ENST00000557342 KRTAP10-3P60369 221 aa9.96□□□□□ -0.82
SLIRP-209ENST00000557342 SRSF4Q08170 494 aaKnown RBP9.96□□□□□ -0.82
SLIRP-209ENST00000557342 HNF4GQ14541 408 aa9.96□□□□□ -0.82
SLIRP-209ENST00000557342 ABCA11PQ4W5N1 156 aa9.96□□□□□ -0.82
SLIRP-209ENST00000557342 FOXB2Q5VYV0 432 aa9.96□□□□□ -0.82
SLIRP-209ENST00000557342 Q6ZS49 121 aa9.96□□□□□ -0.82
SLIRP-209ENST00000557342 ZNF833PQ6ZTB9 187 aa9.96□□□□□ -0.82
SLIRP-209ENST00000557342 CLVS1Q8IUQ0 354 aaPredicted RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms