RNA–Protein interactions for RNA: ENST00000557285.1

VSX1-207, Transcript of visual system homeobox 1, humanhuman

TSL 3

Gene VSX1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-207ENST00000557285 PRKDCP78527 4128 aaKnown RBP13.09□□□□□ -0.31
VSX1-207ENST00000557285 HTD2P86397 168 aa13.09□□□□□ -0.31
VSX1-207ENST00000557285 EBI3Q14213 229 aa13.09□□□□□ -0.31
VSX1-207ENST00000557285 C2orf76Q3KRA6 126 aa13.09□□□□□ -0.31
VSX1-207ENST00000557285 SVOPQ8N4V2 548 aa13.09□□□□□ -0.31
VSX1-207ENST00000557285 Q8N6K4 173 aa13.09□□□□□ -0.31
VSX1-207ENST00000557285 Q8N9W7 124 aa13.09□□□□□ -0.31
VSX1-207ENST00000557285 OR2AK2Q8NG84 335 aa13.09□□□□□ -0.31
VSX1-207ENST00000557285 FAM3DQ96BQ1 224 aa13.09□□□□□ -0.31
VSX1-207ENST00000557285 ARHGAP5-AS1Q96IT6 56 aa13.09□□□□□ -0.31
VSX1-207ENST00000557285 RASL11BQ9BPW5 248 aa13.09□□□□□ -0.31
VSX1-207ENST00000557285 MRPL20Q9BYC9 149 aaKnown RBP13.09□□□□□ -0.31
VSX1-207ENST00000557285 Q9H521 79 aa13.09□□□□□ -0.31
VSX1-207ENST00000557285 NOTCH3Q9UM47 2321 aa13.09□□□□□ -0.31
VSX1-207ENST00000557285 ST8SIA5O15466 376 aa13.08□□□□□ -0.32
VSX1-207ENST00000557285 LANCL1O43813 399 aa13.08□□□□□ -0.32
VSX1-207ENST00000557285 NAPSAO96009 420 aa13.08□□□□□ -0.32
VSX1-207ENST00000557285 CD33P20138 364 aa13.08□□□□□ -0.32
VSX1-207ENST00000557285 MYL9P24844 172 aa13.08□□□□□ -0.32
VSX1-207ENST00000557285 PSMB9P28065 219 aa13.08□□□□□ -0.32
VSX1-207ENST00000557285 F2RL1P55085 397 aa13.08□□□□□ -0.32
VSX1-207ENST00000557285 GABARAPL2P60520 117 aa13.08□□□□□ -0.32
VSX1-207ENST00000557285 LSAMPQ13449 338 aa13.08□□□□□ -0.32
VSX1-207ENST00000557285 SAMD5Q5TGI4 173 aa13.08□□□□□ -0.32
VSX1-207ENST00000557285 ZNF554Q86TJ5 538 aa13.08□□□□□ -0.32
VSX1-207ENST00000557285 FOXRED2Q8IWF2 684 aa13.08□□□□□ -0.32
VSX1-207ENST00000557285 CHPT1Q8WUD6 406 aa13.08□□□□□ -0.32
VSX1-207ENST00000557285 S1PR3Q99500 378 aa13.08□□□□□ -0.32
VSX1-207ENST00000557285 NDUFB11Q9NX14 153 aa13.08□□□□□ -0.32
VSX1-207ENST00000557285 STEAP1Q9UHE8 339 aa13.08□□□□□ -0.32
VSX1-207ENST00000557285 SLC23A1Q9UHI7 598 aa13.08□□□□□ -0.32
VSX1-207ENST00000557285 SAA2-SAA4A0A096LPE2 208 aa13.07□□□□□ -0.32
VSX1-207ENST00000557285 A0A0B4J203 849 aa13.07□□□□□ -0.32
VSX1-207ENST00000557285 TMEM272A0A1B0GTI8 110 aa13.07□□□□□ -0.32
VSX1-207ENST00000557285 SHISA3A0PJX4 238 aa13.07□□□□□ -0.32
VSX1-207ENST00000557285 PDCD5O14737 125 aa13.07□□□□□ -0.32
VSX1-207ENST00000557285 DENRO43583 198 aaKnown RBP13.07□□□□□ -0.32
VSX1-207ENST00000557285 YPEL1O60688 119 aa13.07□□□□□ -0.32
VSX1-207ENST00000557285 IGHG2P01859 326 aa13.07□□□□□ -0.32
VSX1-207ENST00000557285 SAA2P0DJI9 122 aaPredicted RBP13.07□□□□□ -0.32
VSX1-207ENST00000557285 SLC2A2P11168 524 aaPredicted RBP13.07□□□□□ -0.32
VSX1-207ENST00000557285 GPR12P47775 334 aa13.07□□□□□ -0.32
VSX1-207ENST00000557285 BEAN1Q3B7T3 259 aa13.07□□□□□ -0.32
VSX1-207ENST00000557285 C22orf42Q6IC83 251 aa13.07□□□□□ -0.32
VSX1-207ENST00000557285 MOB1BQ7L9L4 216 aa13.07□□□□□ -0.32
VSX1-207ENST00000557285 ODF3L1Q8IXM7 274 aa13.07□□□□□ -0.32
VSX1-207ENST00000557285 YPEL2Q96QA6 119 aa13.07□□□□□ -0.32
VSX1-207ENST00000557285 PECRQ9BY49 303 aa13.07□□□□□ -0.32
VSX1-207ENST00000557285 PARP12Q9H0J9 701 aaKnown RBP13.07□□□□□ -0.32
VSX1-207ENST00000557285 OR1A1Q9P1Q5 309 aa13.07□□□□□ -0.32
VSX1-207ENST00000557285 LRRC42Q9Y546 428 aa13.07□□□□□ -0.32
VSX1-207ENST00000557285 A0A075B6Q4 140 aa13.06□□□□□ -0.32
VSX1-207ENST00000557285 NUDT19A8MXV4 375 aa13.06□□□□□ -0.32
VSX1-207ENST00000557285 HSPA12AO43301 675 aa13.06□□□□□ -0.32
VSX1-207ENST00000557285 IGLL1P15814 213 aa13.06□□□□□ -0.32
VSX1-207ENST00000557285 PSMD7P51665 324 aa13.06□□□□□ -0.32
VSX1-207ENST00000557285 SLC35B1P78383 322 aa13.06□□□□□ -0.32
VSX1-207ENST00000557285 HLA-DRB3P79483 266 aa13.06□□□□□ -0.32
VSX1-207ENST00000557285 MMDQ15546 238 aa13.06□□□□□ -0.32
VSX1-207ENST00000557285 STEAP3Q658P3 488 aa13.06□□□□□ -0.32
VSX1-207ENST00000557285 ZNF880Q6PDB4 577 aa13.06□□□□□ -0.32
VSX1-207ENST00000557285 C18orf65Q6ZTR6 163 aa13.06□□□□□ -0.32
VSX1-207ENST00000557285 STPG2Q8N412 459 aa13.06□□□□□ -0.32
VSX1-207ENST00000557285 FAM89BQ8N5H3 189 aa13.06□□□□□ -0.32
VSX1-207ENST00000557285 OR56B1Q8NGI3 324 aa13.06□□□□□ -0.32
VSX1-207ENST00000557285 CMSS1Q9BQ75 279 aaKnown RBP13.06□□□□□ -0.32
VSX1-207ENST00000557285 HSPB9Q9BQS6 159 aa13.06□□□□□ -0.32
VSX1-207ENST00000557285 ABCG5Q9H222 651 aa13.06□□□□□ -0.32
VSX1-207ENST00000557285 C12orf4Q9NQ89 552 aa13.06□□□□□ -0.32
VSX1-207ENST00000557285 PLSCR3Q9NRY6 295 aa13.06□□□□□ -0.32
VSX1-207ENST00000557285 LIN7CQ9NUP9 197 aaKnown RBP13.06□□□□□ -0.32
VSX1-207ENST00000557285 TGP01266 2768 aa13.05□□□□□ -0.32
VSX1-207ENST00000557285 SCTP09683 121 aa13.05□□□□□ -0.32
VSX1-207ENST00000557285 CNTFRP26992 372 aa13.05□□□□□ -0.32
VSX1-207ENST00000557285 TMEM50BP56557 158 aa13.05□□□□□ -0.32
VSX1-207ENST00000557285 RPL39P5Q59GN2 51 aa13.05□□□□□ -0.32
VSX1-207ENST00000557285 PLAC9Q5JTB6 97 aa13.05□□□□□ -0.32
VSX1-207ENST00000557285 LCNL1Q6ZST4 164 aa13.05□□□□□ -0.32
VSX1-207ENST00000557285 SPARTQ8N0X7 666 aa13.05□□□□□ -0.32
VSX1-207ENST00000557285 ABHD14BQ96IU4 210 aa13.05□□□□□ -0.32
VSX1-207ENST00000557285 NABP2Q9BQ15 211 aa13.05□□□□□ -0.32
VSX1-207ENST00000557285 IFI27L2Q9H2X8 130 aa13.05□□□□□ -0.32
VSX1-207ENST00000557285 RIMS4Q9H426 269 aaPredicted RBP13.05□□□□□ -0.32
VSX1-207ENST00000557285 RAB22AQ9UL26 194 aa13.05□□□□□ -0.32
VSX1-207ENST00000557285 TRAV1-2A0A0B4J238 106 aa13.04□□□□□ -0.32
VSX1-207ENST00000557285 TRDV1A0A1B0GX56 115 aa13.04□□□□□ -0.32
VSX1-207ENST00000557285 FOXI3A8MTJ6 420 aaPredicted RBP13.04□□□□□ -0.32
VSX1-207ENST00000557285 AP4M1O00189 453 aa13.04□□□□□ -0.32
VSX1-207ENST00000557285 RAB3BP20337 219 aa13.04□□□□□ -0.32
VSX1-207ENST00000557285 SOX6P35712 828 aa13.04□□□□□ -0.32
VSX1-207ENST00000557285 CEACAM6P40199 344 aa13.04□□□□□ -0.32
VSX1-207ENST00000557285 ACTBP60709 375 aa13.04□□□□□ -0.32
VSX1-207ENST00000557285 RPL23AP62750 156 aaKnown RBP13.04□□□□□ -0.32
VSX1-207ENST00000557285 MRPS15P82914 257 aaKnown RBP13.04□□□□□ -0.32
VSX1-207ENST00000557285 MOGAT2Q3SYC2 334 aa13.04□□□□□ -0.32
VSX1-207ENST00000557285 GLDNQ6ZMI3 551 aaPredicted RBP13.04□□□□□ -0.32
VSX1-207ENST00000557285 ZNF833PQ6ZTB9 187 aa13.04□□□□□ -0.32
VSX1-207ENST00000557285 C8orf86Q6ZUL3 223 aa13.04□□□□□ -0.32
VSX1-207ENST00000557285 FAM71E2Q8N5Q1 922 aa13.04□□□□□ -0.32
VSX1-207ENST00000557285 KLHL30-AS1Q8NEE0 82 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms