RNA–Protein interactions for RNA: ENST00000556285.1

TGFB3-204, Transcript of transforming growth factor beta 3, humanhuman

TSL 1 (best) BASIC

Gene TGFB3, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-204ENST00000556285 KCNK15Q9H427 330 aa10.33□□□□□ -0.76
TGFB3-204ENST00000556285 PARP11Q9NR21 331 aa10.33□□□□□ -0.76
TGFB3-204ENST00000556285 CHCHD3Q9NX63 227 aaKnown RBP10.33□□□□□ -0.76
TGFB3-204ENST00000556285 CSMD3Q7Z407 3707 aa10.33□□□□□ -0.76
TGFB3-204ENST00000556285 IGHV7-81A0A0B4J1V7 117 aa10.32□□□□□ -0.76
TGFB3-204ENST00000556285 FAM90A10PA6NDY2 464 aa10.32□□□□□ -0.76
TGFB3-204ENST00000556285 FAM90A7PA6NKC0 464 aa10.32□□□□□ -0.76
TGFB3-204ENST00000556285 FAM90A23PA8MXZ1 464 aa10.32□□□□□ -0.76
TGFB3-204ENST00000556285 I3L521 148 aa10.32□□□□□ -0.76
TGFB3-204ENST00000556285 PDCD6O75340 191 aa10.32□□□□□ -0.76
TGFB3-204ENST00000556285 SNRPBP14678 240 aaKnown RBP10.32□□□□□ -0.76
TGFB3-204ENST00000556285 DCTN2Q13561 401 aaKnown RBP10.32□□□□□ -0.76
TGFB3-204ENST00000556285 C6orf141Q5SZD1 244 aa10.32□□□□□ -0.76
TGFB3-204ENST00000556285 FAM27D1Q5T7N8 215 aa10.32□□□□□ -0.76
TGFB3-204ENST00000556285 TRAT1Q6PIZ9 186 aa10.32□□□□□ -0.76
TGFB3-204ENST00000556285 CDH26Q8IXH8 852 aa10.32□□□□□ -0.76
TGFB3-204ENST00000556285 CASTOR1Q8WTX7 329 aa10.32□□□□□ -0.76
TGFB3-204ENST00000556285 ALX4Q9H161 411 aaPredicted RBP10.32□□□□□ -0.76
TGFB3-204ENST00000556285 OR51J1Q9H342 316 aa10.32□□□□□ -0.76
TGFB3-204ENST00000556285 ZMAT5Q9UDW3 170 aaKnown RBP10.32□□□□□ -0.76
TGFB3-204ENST00000556285 ZNF580Q9UK33 172 aa10.32□□□□□ -0.76
TGFB3-204ENST00000556285 FBXO7Q9Y3I1 522 aa10.32□□□□□ -0.76
TGFB3-204ENST00000556285 TENM2Q9NT68 2774 aa10.31□□□□□ -0.76
TGFB3-204ENST00000556285 SAA2-SAA4A0A096LPE2 208 aa10.31□□□□□ -0.76
TGFB3-204ENST00000556285 CA11O75493 328 aa10.31□□□□□ -0.76
TGFB3-204ENST00000556285 IGLV1-40P01703 118 aa10.31□□□□□ -0.76
TGFB3-204ENST00000556285 GLAP06280 429 aa10.31□□□□□ -0.76
TGFB3-204ENST00000556285 NHLRC4P0CG21 123 aaPredicted RBP10.31□□□□□ -0.76
TGFB3-204ENST00000556285 SAA2P0DJI9 122 aaPredicted RBP10.31□□□□□ -0.76
TGFB3-204ENST00000556285 CHATP28329 748 aa10.31□□□□□ -0.76
TGFB3-204ENST00000556285 BLVRBP30043 206 aaPredicted RBP10.31□□□□□ -0.76
TGFB3-204ENST00000556285 NDPQ00604 133 aa10.31□□□□□ -0.76
TGFB3-204ENST00000556285 TTC23Q5W5X9 447 aa10.31□□□□□ -0.76
TGFB3-204ENST00000556285 ZNF833PQ6ZTB9 187 aa10.31□□□□□ -0.76
TGFB3-204ENST00000556285 AHSA2Q719I0 299 aa10.31□□□□□ -0.76
TGFB3-204ENST00000556285 DHRSXQ8N5I4 330 aa10.31□□□□□ -0.76
TGFB3-204ENST00000556285 OR1N2Q8NGR9 330 aa10.31□□□□□ -0.76
TGFB3-204ENST00000556285 FAAP24Q9BTP7 215 aa10.31□□□□□ -0.76
TGFB3-204ENST00000556285 PARP12Q9H0J9 701 aaKnown RBP10.31□□□□□ -0.76
TGFB3-204ENST00000556285 RAB9BQ9NP90 201 aa10.31□□□□□ -0.76
TGFB3-204ENST00000556285 KCNIP1Q9NZI2 227 aa10.31□□□□□ -0.76
TGFB3-204ENST00000556285 PSORS1C1Q9UIG5 152 aa10.31□□□□□ -0.76
TGFB3-204ENST00000556285 JPT1Q9UK76 154 aa10.31□□□□□ -0.76
TGFB3-204ENST00000556285 ZNF256Q9Y2P7 627 aaPredicted RBP10.31□□□□□ -0.76
TGFB3-204ENST00000556285 TRAV41A0A0B4J266 112 aa10.3□□□□□ -0.76
TGFB3-204ENST00000556285 EFCAB10A6NFE3 127 aa10.3□□□□□ -0.76
TGFB3-204ENST00000556285 NBR2O15453 112 aa10.3□□□□□ -0.76
TGFB3-204ENST00000556285 ST8SIA5O15466 376 aa10.3□□□□□ -0.76
TGFB3-204ENST00000556285 SOX15O60248 233 aa10.3□□□□□ -0.76
TGFB3-204ENST00000556285 YPEL1O60688 119 aa10.3□□□□□ -0.76
TGFB3-204ENST00000556285 HLA-DRB1P01911 266 aa10.3□□□□□ -0.76
TGFB3-204ENST00000556285 OR5H8P0DN80 308 aa10.3□□□□□ -0.76
TGFB3-204ENST00000556285 WNT4P56705 351 aa10.3□□□□□ -0.76
TGFB3-204ENST00000556285 TAS2R43P59537 309 aa10.3□□□□□ -0.76
TGFB3-204ENST00000556285 HTD2P86397 168 aa10.3□□□□□ -0.76
TGFB3-204ENST00000556285 MED21Q13503 144 aa10.3□□□□□ -0.76
TGFB3-204ENST00000556285 HMGN3Q15651 99 aa10.3□□□□□ -0.76
TGFB3-204ENST00000556285 C5orf64Q2M2E5 130 aa10.3□□□□□ -0.76
TGFB3-204ENST00000556285 TMEM65Q6PI78 240 aa10.3□□□□□ -0.76
TGFB3-204ENST00000556285 C6orf201Q7Z4U5 140 aa10.3□□□□□ -0.76
TGFB3-204ENST00000556285 LRRTM1Q86UE6 522 aa10.3□□□□□ -0.76
TGFB3-204ENST00000556285 SETD9Q8NE22 299 aa10.3□□□□□ -0.76
TGFB3-204ENST00000556285 NPBQ8NG41 125 aa10.3□□□□□ -0.76
TGFB3-204ENST00000556285 DCUN1D4Q92564 292 aa10.3□□□□□ -0.76
TGFB3-204ENST00000556285 UBE2E2Q96LR5 201 aa10.3□□□□□ -0.76
TGFB3-204ENST00000556285 YPEL2Q96QA6 119 aa10.3□□□□□ -0.76
TGFB3-204ENST00000556285 ZNF251Q9BRH9 671 aa10.3□□□□□ -0.76
TGFB3-204ENST00000556285 NICN1Q9BSH3 213 aa10.3□□□□□ -0.76
TGFB3-204ENST00000556285 IFI27L2Q9H2X8 130 aa10.3□□□□□ -0.76
TGFB3-204ENST00000556285 VSIG4Q9Y279 399 aa10.3□□□□□ -0.76
TGFB3-204ENST00000556285 BIRC6Q9NR09 4857 aa10.3□□□□□ -0.76
TGFB3-204ENST00000556285 SORL1Q92673 2214 aa10.3□□□□□ -0.76
TGFB3-204ENST00000556285 FCN1O00602 326 aa10.29□□□□□ -0.76
TGFB3-204ENST00000556285 LY86O95711 162 aa10.29□□□□□ -0.76
TGFB3-204ENST00000556285 HTR2CP28335 458 aa10.29□□□□□ -0.76
TGFB3-204ENST00000556285 RAB9AP51151 201 aa10.29□□□□□ -0.76
TGFB3-204ENST00000556285 RUNX1Q01196 453 aa10.29□□□□□ -0.76
TGFB3-204ENST00000556285 ZNF616Q08AN1 781 aa10.29□□□□□ -0.76
TGFB3-204ENST00000556285 RPL39P5Q59GN2 51 aa10.29□□□□□ -0.76
TGFB3-204ENST00000556285 C19orf54Q5BKX5 351 aa10.29□□□□□ -0.76
TGFB3-204ENST00000556285 LIN54Q6MZP7 749 aa10.29□□□□□ -0.76
TGFB3-204ENST00000556285 FAM131AQ6UXB0 335 aa10.29□□□□□ -0.76
TGFB3-204ENST00000556285 GLDNQ6ZMI3 551 aaPredicted RBP10.29□□□□□ -0.76
TGFB3-204ENST00000556285 ZNF554Q86TJ5 538 aa10.29□□□□□ -0.76
TGFB3-204ENST00000556285 NANOGP1Q8N7R0 232 aa10.29□□□□□ -0.76
TGFB3-204ENST00000556285 NKAIN3Q8N8D7 197 aa10.29□□□□□ -0.76
TGFB3-204ENST00000556285 MINDY2Q8NBR6 621 aa10.29□□□□□ -0.76
TGFB3-204ENST00000556285 BPIFB6Q8NFQ5 453 aa10.29□□□□□ -0.76
TGFB3-204ENST00000556285 IL1F10Q8WWZ1 152 aa10.29□□□□□ -0.76
TGFB3-204ENST00000556285 GALMQ96C23 342 aa10.29□□□□□ -0.76
TGFB3-204ENST00000556285 UQCC2Q9BRT2 126 aa10.29□□□□□ -0.76
TGFB3-204ENST00000556285 FBXL15Q9H469 300 aa10.29□□□□□ -0.76
TGFB3-204ENST00000556285 CNOT2Q9NZN8 540 aaKnown RBP10.29□□□□□ -0.76
TGFB3-204ENST00000556285 A0A0A6YYD4 124 aa10.28□□□□□ -0.76
TGFB3-204ENST00000556285 MYL12BO14950 172 aa10.28□□□□□ -0.76
TGFB3-204ENST00000556285 NDUFA3O95167 84 aa10.28□□□□□ -0.76
TGFB3-204ENST00000556285 CD1AP06126 327 aa10.28□□□□□ -0.76
TGFB3-204ENST00000556285 OR8U8P0C7N1 319 aa10.28□□□□□ -0.76
TGFB3-204ENST00000556285 CT45A6P0DMU7 189 aa10.28□□□□□ -0.76
TGFB3-204ENST00000556285 CT45A5P0DMU8 189 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms