RNA–Protein interactions for RNA: ENST00000555953.1

SCFD1-217, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-217ENST00000555953 DAPL1A0PJW8 107 aa1.26□□□□□ -2.21
SCFD1-217ENST00000555953 LINC00862A6NCI5 91 aa1.26□□□□□ -2.21
SCFD1-217ENST00000555953 SDHAF1A6NFY7 115 aa1.26□□□□□ -2.21
SCFD1-217ENST00000555953 C3orf84H3BNL1 204 aa1.26□□□□□ -2.21
SCFD1-217ENST00000555953 J3QKU1 62 aa1.26□□□□□ -2.21
SCFD1-217ENST00000555953 CALUO43852 315 aaPredicted RBP1.26□□□□□ -2.21
SCFD1-217ENST00000555953 OR4A8P0C604 315 aa1.26□□□□□ -2.21
SCFD1-217ENST00000555953 AGTR1P30556 359 aa1.26□□□□□ -2.21
SCFD1-217ENST00000555953 PSMB3P49720 205 aa1.26□□□□□ -2.21
SCFD1-217ENST00000555953 SULT1A2P50226 295 aa1.26□□□□□ -2.21
SCFD1-217ENST00000555953 BSPH1Q075Z2 132 aa1.26□□□□□ -2.21
SCFD1-217ENST00000555953 C1DQ13901 141 aaKnown RBP1.26□□□□□ -2.21
SCFD1-217ENST00000555953 LRRC26Q2I0M4 334 aa1.26□□□□□ -2.21
SCFD1-217ENST00000555953 PDPK2PQ6A1A2 396 aa1.26□□□□□ -2.21
SCFD1-217ENST00000555953 ZNF322Q6U7Q0 402 aaPredicted RBP1.26□□□□□ -2.21
SCFD1-217ENST00000555953 MSRB3Q8IXL7 192 aa1.26□□□□□ -2.21
SCFD1-217ENST00000555953 YIPF7Q8N8F6 280 aa1.26□□□□□ -2.21
SCFD1-217ENST00000555953 OR5L1Q8NGL2 311 aa1.26□□□□□ -2.21
SCFD1-217ENST00000555953 PHOSPHO2Q8TCD6 241 aa1.26□□□□□ -2.21
SCFD1-217ENST00000555953 TNFAIP8L1Q8WVP5 186 aa1.26□□□□□ -2.21
SCFD1-217ENST00000555953 ZNF514Q96K75 400 aaPredicted RBP1.26□□□□□ -2.21
SCFD1-217ENST00000555953 RBP7Q96R05 134 aa1.26□□□□□ -2.21
SCFD1-217ENST00000555953 GPR22Q99680 433 aa1.26□□□□□ -2.21
SCFD1-217ENST00000555953 UPK3BQ9BT76 320 aa1.26□□□□□ -2.21
SCFD1-217ENST00000555953 TMEM208Q9BTX3 173 aa1.26□□□□□ -2.21
SCFD1-217ENST00000555953 MED28Q9H204 178 aa1.26□□□□□ -2.21
SCFD1-217ENST00000555953 TUBA4BQ9H853 241 aa1.26□□□□□ -2.21
SCFD1-217ENST00000555953 GLS2Q9UI32 602 aa1.26□□□□□ -2.21
SCFD1-217ENST00000555953 LINC00527Q9UJ94 153 aa1.26□□□□□ -2.21
SCFD1-217ENST00000555953 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.26□□□□□ -2.21
SCFD1-217ENST00000555953 MRPS16Q9Y3D3 137 aaKnown RBP1.26□□□□□ -2.21
SCFD1-217ENST00000555953 DSCAML1Q8TD84 2053 aa1.26□□□□□ -2.21
SCFD1-217ENST00000555953 TRPM6Q9BX84 2022 aa1.25□□□□□ -2.21
SCFD1-217ENST00000555953 CRB1P82279 1406 aa1.25□□□□□ -2.21
SCFD1-217ENST00000555953 PLXNA3P51805 1871 aa1.25□□□□□ -2.21
SCFD1-217ENST00000555953 IGSF23A1L1A6 192 aa1.25□□□□□ -2.21
SCFD1-217ENST00000555953 GOLGA6L10A6NI86 522 aa1.25□□□□□ -2.21
SCFD1-217ENST00000555953 CCRL2O00421 344 aa1.25□□□□□ -2.21
SCFD1-217ENST00000555953 COPEO14579 308 aa1.25□□□□□ -2.21
SCFD1-217ENST00000555953 CETN3O15182 167 aa1.25□□□□□ -2.21
SCFD1-217ENST00000555953 CRYBA1P05813 215 aa1.25□□□□□ -2.21
SCFD1-217ENST00000555953 NQO1P15559 274 aaKnown RBP1.25□□□□□ -2.21
SCFD1-217ENST00000555953 ORM2P19652 201 aa1.25□□□□□ -2.21
SCFD1-217ENST00000555953 CDK2P24941 298 aa1.25□□□□□ -2.21
SCFD1-217ENST00000555953 ATP6V0CP27449 155 aa1.25□□□□□ -2.21
SCFD1-217ENST00000555953 ADORA1P30542 326 aa1.25□□□□□ -2.21
SCFD1-217ENST00000555953 OPRM1P35372 400 aa1.25□□□□□ -2.21
SCFD1-217ENST00000555953 H2BFSP57053 126 aa1.25□□□□□ -2.21
SCFD1-217ENST00000555953 UBE2G2P60604 165 aa1.25□□□□□ -2.21
SCFD1-217ENST00000555953 SLC35A2P78381 396 aa1.25□□□□□ -2.21
SCFD1-217ENST00000555953 PDGFRLQ15198 375 aa1.25□□□□□ -2.21
SCFD1-217ENST00000555953 TBC1D28Q2M2D7 210 aa1.25□□□□□ -2.21
SCFD1-217ENST00000555953 MRPL51Q4U2R6 128 aaKnown RBP1.25□□□□□ -2.21
SCFD1-217ENST00000555953 ACSBG2Q5FVE4 666 aa1.25□□□□□ -2.21
SCFD1-217ENST00000555953 SDHAF4Q5VUM1 108 aa1.25□□□□□ -2.21
SCFD1-217ENST00000555953 XKRXQ6PP77 449 aa1.25□□□□□ -2.21
SCFD1-217ENST00000555953 PLEKHG7Q6ZR37 379 aa1.25□□□□□ -2.21
SCFD1-217ENST00000555953 Q6ZRU5 148 aa1.25□□□□□ -2.21
SCFD1-217ENST00000555953 CD302Q8IX05 232 aa1.25□□□□□ -2.21
SCFD1-217ENST00000555953 FAM9CQ8IZT9 166 aa1.25□□□□□ -2.21
SCFD1-217ENST00000555953 DNAAF3Q8N9W5 541 aa1.25□□□□□ -2.21
SCFD1-217ENST00000555953 TMEM75Q8N9X5 138 aa1.25□□□□□ -2.21
SCFD1-217ENST00000555953 MFSD8Q8NHS3 518 aa1.25□□□□□ -2.21
SCFD1-217ENST00000555953 SUN5Q8TC36 379 aa1.25□□□□□ -2.21
SCFD1-217ENST00000555953 CAPZA3Q96KX2 299 aa1.25□□□□□ -2.21
SCFD1-217ENST00000555953 STACQ99469 402 aa1.25□□□□□ -2.21
SCFD1-217ENST00000555953 C1QTNF6Q9BXI9 259 aa1.25□□□□□ -2.21
SCFD1-217ENST00000555953 DNAJC12Q9UKB3 198 aa1.25□□□□□ -2.21
SCFD1-217ENST00000555953 TP53TG1Q9Y2A0 90 aa1.25□□□□□ -2.21
SCFD1-217ENST00000555953 C15orf41Q9Y2V0 281 aa1.25□□□□□ -2.21
SCFD1-217ENST00000555953 HSPE1-MOB4S4R3N1 261 aa1.25□□□□□ -2.21
SCFD1-217ENST00000555953 STRCP1A6NGW2 1772 aa1.25□□□□□ -2.21
SCFD1-217ENST00000555953 SLIT2O94813 1529 aa1.25□□□□□ -2.21
SCFD1-217ENST00000555953 DICER1Q9UPY3 1922 aaKnown RBP1.25□□□□□ -2.21
SCFD1-217ENST00000555953 NPATQ14207 1427 aa1.24□□□□□ -2.21
SCFD1-217ENST00000555953 LOC102725191A0A1B0GVB3 256 aa1.24□□□□□ -2.21
SCFD1-217ENST00000555953 C17orf98A8MV24 154 aa1.24□□□□□ -2.21
SCFD1-217ENST00000555953 ITGB1BP1O14713 200 aa1.24□□□□□ -2.21
SCFD1-217ENST00000555953 ZW10O43264 779 aa1.24□□□□□ -2.21
SCFD1-217ENST00000555953 STX10O60499 249 aa1.24□□□□□ -2.21
SCFD1-217ENST00000555953 CRTAPO75718 401 aaPredicted RBP1.24□□□□□ -2.21
SCFD1-217ENST00000555953 ATP6V1G2O95670 118 aa1.24□□□□□ -2.21
SCFD1-217ENST00000555953 ASS1P00966 412 aaKnown RBP1.24□□□□□ -2.21
SCFD1-217ENST00000555953 IGLV3-27P01718 113 aa1.24□□□□□ -2.21
SCFD1-217ENST00000555953 HBZP02008 142 aa1.24□□□□□ -2.21
SCFD1-217ENST00000555953 CRYGDP07320 174 aa1.24□□□□□ -2.21
SCFD1-217ENST00000555953 OR13C7P0DN81 318 aa1.24□□□□□ -2.21
SCFD1-217ENST00000555953 IGHV3-30-3P0DP02 117 aa1.24□□□□□ -2.21
SCFD1-217ENST00000555953 HIST1H1CP16403 213 aaKnown RBP1.24□□□□□ -2.21
SCFD1-217ENST00000555953 GZMHP20718 246 aa1.24□□□□□ -2.21
SCFD1-217ENST00000555953 FGF12P61328 243 aa1.24□□□□□ -2.21
SCFD1-217ENST00000555953 DAD1P61803 113 aa1.24□□□□□ -2.21
SCFD1-217ENST00000555953 SKP1P63208 163 aa1.24□□□□□ -2.21
SCFD1-217ENST00000555953 PSG4Q00888 419 aa1.24□□□□□ -2.21
SCFD1-217ENST00000555953 HLA-DRB5Q30154 266 aa1.24□□□□□ -2.21
SCFD1-217ENST00000555953 DOLPP1Q86YN1 238 aa1.24□□□□□ -2.21
SCFD1-217ENST00000555953 FUNDC1Q8IVP5 155 aa1.24□□□□□ -2.21
SCFD1-217ENST00000555953 OR4C16Q8NGL9 310 aa1.24□□□□□ -2.21
SCFD1-217ENST00000555953 DDI1Q8WTU0 396 aa1.24□□□□□ -2.21
SCFD1-217ENST00000555953 TLCD1Q96CP7 247 aa1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms