RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 MTERF4Q7Z6M4 381 aaKnown RBP1.02□□□□□ -2.25
SCFD1-214ENST00000554819 LRRC6Q86X45 466 aa1.02□□□□□ -2.25
SCFD1-214ENST00000554819 SLC35F6Q8N357 371 aa1.02□□□□□ -2.25
SCFD1-214ENST00000554819 OR5K1Q8NHB7 308 aa1.02□□□□□ -2.25
SCFD1-214ENST00000554819 TMEM239Q8WW34 195 aa1.02□□□□□ -2.25
SCFD1-214ENST00000554819 TMIGD2Q96BF3 282 aa1.02□□□□□ -2.25
SCFD1-214ENST00000554819 HSPB9Q9BQS6 159 aa1.02□□□□□ -2.25
SCFD1-214ENST00000554819 TIMM21Q9BVV7 248 aa1.02□□□□□ -2.25
SCFD1-214ENST00000554819 SPZ1Q9BXG8 430 aa1.02□□□□□ -2.25
SCFD1-214ENST00000554819 BABAM2Q9NXR7 383 aa1.02□□□□□ -2.25
SCFD1-214ENST00000554819 COMMD9Q9P000 198 aa1.02□□□□□ -2.25
SCFD1-214ENST00000554819 SNX24Q9Y343 169 aa1.02□□□□□ -2.25
SCFD1-214ENST00000554819 RBMX2Q9Y388 322 aaKnown RBP1.02□□□□□ -2.25
SCFD1-214ENST00000554819 NYNRINQ9P2P1 1898 aaKnown RBP1.01□□□□□ -2.25
SCFD1-214ENST00000554819 LINC00862A6NCI5 91 aa1.01□□□□□ -2.25
SCFD1-214ENST00000554819 EFCAB9A8MZ26 197 aa1.01□□□□□ -2.25
SCFD1-214ENST00000554819 C2orf74A8MZ97 194 aa1.01□□□□□ -2.25
SCFD1-214ENST00000554819 SNAP29O95721 258 aa1.01□□□□□ -2.25
SCFD1-214ENST00000554819 ESDP10768 282 aa1.01□□□□□ -2.25
SCFD1-214ENST00000554819 NUP62P37198 522 aaPredicted RBP1.01□□□□□ -2.25
SCFD1-214ENST00000554819 TNNC1P63316 161 aa1.01□□□□□ -2.25
SCFD1-214ENST00000554819 ZNF90Q03938 601 aa1.01□□□□□ -2.25
SCFD1-214ENST00000554819 RELAQ04206 551 aa1.01□□□□□ -2.25
SCFD1-214ENST00000554819 FLOT2Q14254 428 aa1.01□□□□□ -2.25
SCFD1-214ENST00000554819 FAM201AQ5SY85 155 aa1.01□□□□□ -2.25
SCFD1-214ENST00000554819 FNDC9Q8TBE3 224 aa1.01□□□□□ -2.25
SCFD1-214ENST00000554819 C11orf1Q9H5F2 150 aa1.01□□□□□ -2.25
SCFD1-214ENST00000554819 METTL17Q9H7H0 456 aaPredicted RBP1.01□□□□□ -2.25
SCFD1-214ENST00000554819 MAT2BQ9NZL9 334 aa1.01□□□□□ -2.25
SCFD1-214ENST00000554819 DNAJC12Q9UKB3 198 aa1.01□□□□□ -2.25
SCFD1-214ENST00000554819 SNX12Q9UMY4 172 aa1.01□□□□□ -2.25
SCFD1-214ENST00000554819 FLG2Q5D862 2391 aaPredicted RBP1.01□□□□□ -2.25
SCFD1-214ENST00000554819 MDC1Q14676 2089 aaKnown RBP1.01□□□□□ -2.25
SCFD1-214ENST00000554819 SLX4Q8IY92 1834 aa1.01□□□□□ -2.25
SCFD1-214ENST00000554819 C11orf86A6NJI1 115 aa1□□□□□ -2.25
SCFD1-214ENST00000554819 GPR171O14626 319 aa1□□□□□ -2.25
SCFD1-214ENST00000554819 GNRH2O43555 120 aa1□□□□□ -2.25
SCFD1-214ENST00000554819 CCDC172P0C7W6 258 aa1□□□□□ -2.25
SCFD1-214ENST00000554819 LYNX1P0DP58 116 aa1□□□□□ -2.25
SCFD1-214ENST00000554819 CRHBPP24387 322 aa1□□□□□ -2.25
SCFD1-214ENST00000554819 MAGEA12P43365 314 aa1□□□□□ -2.25
SCFD1-214ENST00000554819 SULT1A2P50226 295 aa1□□□□□ -2.25
SCFD1-214ENST00000554819 CARD18P57730 90 aa1□□□□□ -2.25
SCFD1-214ENST00000554819 TSPEAR-AS2P59090 65 aa1□□□□□ -2.25
SCFD1-214ENST00000554819 DYNLL1P63167 89 aaKnown RBP1□□□□□ -2.25
SCFD1-214ENST00000554819 GTF2BQ00403 316 aa1□□□□□ -2.25
SCFD1-214ENST00000554819 XRCC4Q13426 336 aa1□□□□□ -2.25
SCFD1-214ENST00000554819 TRMT12Q53H54 448 aaKnown RBP1□□□□□ -2.25
SCFD1-214ENST00000554819 CENPWQ5EE01 88 aa1□□□□□ -2.25
SCFD1-214ENST00000554819 C2orf91Q6ZV80 131 aa1□□□□□ -2.25
SCFD1-214ENST00000554819 COA5Q86WW8 74 aa1□□□□□ -2.25
SCFD1-214ENST00000554819 YIPF7Q8N8F6 280 aa1□□□□□ -2.25
SCFD1-214ENST00000554819 OR4P4Q8NGL7 312 aa1□□□□□ -2.25
SCFD1-214ENST00000554819 LRRC39Q96DD0 335 aa1□□□□□ -2.25
SCFD1-214ENST00000554819 PRRG3Q9BZD7 231 aa1□□□□□ -2.25
SCFD1-214ENST00000554819 MRPS16Q9Y3D3 137 aaKnown RBP1□□□□□ -2.25
SCFD1-214ENST00000554819 COL6A6A6NMZ7 2263 aa1□□□□□ -2.25
SCFD1-214ENST00000554819 FN1P02751 2386 aaKnown RBP0.99□□□□□ -2.25
SCFD1-214ENST00000554819 C9J4A7 227 aa0.99□□□□□ -2.25
SCFD1-214ENST00000554819 PHYHO14832 338 aa0.99□□□□□ -2.25
SCFD1-214ENST00000554819 LDOC1O95751 146 aaPredicted RBP0.99□□□□□ -2.25
SCFD1-214ENST00000554819 CST4P01036 141 aa0.99□□□□□ -2.25
SCFD1-214ENST00000554819 NQO2P16083 231 aa0.99□□□□□ -2.25
SCFD1-214ENST00000554819 ORM2P19652 201 aa0.99□□□□□ -2.25
SCFD1-214ENST00000554819 PSMB3P49720 205 aa0.99□□□□□ -2.25
SCFD1-214ENST00000554819 RAP1GDS1P52306 607 aa0.99□□□□□ -2.25
SCFD1-214ENST00000554819 ERHP84090 104 aaKnown RBP0.99□□□□□ -2.25
SCFD1-214ENST00000554819 XIAPP98170 497 aa0.99□□□□□ -2.25
SCFD1-214ENST00000554819 CHCHD2P9Q5T1J5 151 aaPredicted RBP0.99□□□□□ -2.25
SCFD1-214ENST00000554819 TTC33Q6PID6 262 aaPredicted RBP0.99□□□□□ -2.25
SCFD1-214ENST00000554819 TBX5Q99593 518 aa0.99□□□□□ -2.25
SCFD1-214ENST00000554819 CHST5Q9GZS9 411 aa0.99□□□□□ -2.25
SCFD1-214ENST00000554819 PLCH2O75038 1416 aa0.98□□□□□ -2.25
SCFD1-214ENST00000554819 A0A1B0GX12 115 aa0.98□□□□□ -2.25
SCFD1-214ENST00000554819 UGT2B11O75310 529 aa0.98□□□□□ -2.25
SCFD1-214ENST00000554819 STK16O75716 305 aa0.98□□□□□ -2.25
SCFD1-214ENST00000554819 NPPCP23582 126 aa0.98□□□□□ -2.25
SCFD1-214ENST00000554819 CDK2P24941 298 aa0.98□□□□□ -2.25
SCFD1-214ENST00000554819 OPRM1P35372 400 aa0.98□□□□□ -2.25
SCFD1-214ENST00000554819 FGF12P61328 243 aa0.98□□□□□ -2.25
SCFD1-214ENST00000554819 PSG3Q16557 428 aa0.98□□□□□ -2.25
SCFD1-214ENST00000554819 PABPC1L2AQ5JQF8 200 aa0.98□□□□□ -2.25
SCFD1-214ENST00000554819 OR10J3Q5JRS4 329 aa0.98□□□□□ -2.25
SCFD1-214ENST00000554819 DOLPP1Q86YN1 238 aa0.98□□□□□ -2.25
SCFD1-214ENST00000554819 RNF133Q8WVZ7 376 aa0.98□□□□□ -2.25
SCFD1-214ENST00000554819 PPWD1Q96BP3 646 aaKnown RBP0.98□□□□□ -2.25
SCFD1-214ENST00000554819 TAMM41Q96BW9 452 aa0.98□□□□□ -2.25
SCFD1-214ENST00000554819 MSANTD3Q96H12 275 aa0.98□□□□□ -2.25
SCFD1-214ENST00000554819 MIEN1Q9BRT3 115 aa0.98□□□□□ -2.25
SCFD1-214ENST00000554819 UGT2B28Q9BY64 529 aa0.98□□□□□ -2.25
SCFD1-214ENST00000554819 LINC00527Q9UJ94 153 aa0.98□□□□□ -2.25
SCFD1-214ENST00000554819 HHLA2Q9UM44 414 aa0.98□□□□□ -2.25
SCFD1-214ENST00000554819 A0A1B0GVG6 124 aa0.97□□□□□ -2.25
SCFD1-214ENST00000554819 M0QYV0 167 aa0.97□□□□□ -2.25
SCFD1-214ENST00000554819 NDUFS8O00217 210 aa0.97□□□□□ -2.25
SCFD1-214ENST00000554819 KRTAP10-4P60372 401 aaPredicted RBP0.97□□□□□ -2.25
SCFD1-214ENST00000554819 ACTBP60709 375 aa0.97□□□□□ -2.25
SCFD1-214ENST00000554819 ACTG1P63261 375 aa0.97□□□□□ -2.25
SCFD1-214ENST00000554819 HSP90B2PQ58FF3 399 aa0.97□□□□□ -2.25
SCFD1-214ENST00000554819 OR51H1Q8NH63 302 aa0.97□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms