RNA–Protein interactions for RNA: ENST00000554722.1

GABRB3-207, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 3

Gene GABRB3, Length 406 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-207ENST00000554722 GPR12P47775 334 aa12.36□□□□□ -0.43
GABRB3-207ENST00000554722 TMEM50BP56557 158 aa12.36□□□□□ -0.43
GABRB3-207ENST00000554722 SSX1Q16384 188 aa12.36□□□□□ -0.43
GABRB3-207ENST00000554722 TMEM30BQ3MIR4 351 aa12.36□□□□□ -0.43
GABRB3-207ENST00000554722 DEFB121Q5J5C9 76 aa12.36□□□□□ -0.43
GABRB3-207ENST00000554722 ZNF880Q6PDB4 577 aa12.36□□□□□ -0.43
GABRB3-207ENST00000554722 SVOPQ8N4V2 548 aa12.36□□□□□ -0.43
GABRB3-207ENST00000554722 OR6M1Q8NGM8 313 aa12.36□□□□□ -0.43
GABRB3-207ENST00000554722 CHPT1Q8WUD6 406 aa12.36□□□□□ -0.43
GABRB3-207ENST00000554722 DPF1Q92782 380 aa12.36□□□□□ -0.43
GABRB3-207ENST00000554722 S1PR3Q99500 378 aa12.36□□□□□ -0.43
GABRB3-207ENST00000554722 ABHD14AQ9BUJ0 271 aa12.36□□□□□ -0.43
GABRB3-207ENST00000554722 LIN7CQ9NUP9 197 aaKnown RBP12.36□□□□□ -0.43
GABRB3-207ENST00000554722 KCNIP1Q9NZI2 227 aa12.36□□□□□ -0.43
GABRB3-207ENST00000554722 JPT1Q9UK76 154 aa12.36□□□□□ -0.43
GABRB3-207ENST00000554722 SLC17A2O00624 439 aa12.35□□□□□ -0.43
GABRB3-207ENST00000554722 LANCL1O43813 399 aa12.35□□□□□ -0.43
GABRB3-207ENST00000554722 YPEL1O60688 119 aa12.35□□□□□ -0.43
GABRB3-207ENST00000554722 CNTFRP26992 372 aa12.35□□□□□ -0.43
GABRB3-207ENST00000554722 CALRP27797 417 aaKnown RBP12.35□□□□□ -0.43
GABRB3-207ENST00000554722 OR3A3P47888 321 aa12.35□□□□□ -0.43
GABRB3-207ENST00000554722 RPL23AP62750 156 aaKnown RBP12.35□□□□□ -0.43
GABRB3-207ENST00000554722 HTD2P86397 168 aa12.35□□□□□ -0.43
GABRB3-207ENST00000554722 LSAMPQ13449 338 aa12.35□□□□□ -0.43
GABRB3-207ENST00000554722 STEAP3Q658P3 488 aa12.35□□□□□ -0.43
GABRB3-207ENST00000554722 LCNL1Q6ZST4 164 aa12.35□□□□□ -0.43
GABRB3-207ENST00000554722 ZNF554Q86TJ5 538 aa12.35□□□□□ -0.43
GABRB3-207ENST00000554722 FAM89BQ8N5H3 189 aa12.35□□□□□ -0.43
GABRB3-207ENST00000554722 FAM71E2Q8N5Q1 922 aa12.35□□□□□ -0.43
GABRB3-207ENST00000554722 OR51D1Q8NGF3 324 aa12.35□□□□□ -0.43
GABRB3-207ENST00000554722 YPEL2Q96QA6 119 aa12.35□□□□□ -0.43
GABRB3-207ENST00000554722 MRPL20Q9BYC9 149 aaKnown RBP12.35□□□□□ -0.43
GABRB3-207ENST00000554722 PARP12Q9H0J9 701 aaKnown RBP12.35□□□□□ -0.43
GABRB3-207ENST00000554722 PLGRKTQ9HBL7 147 aa12.35□□□□□ -0.43
GABRB3-207ENST00000554722 RAB9BQ9NP90 201 aa12.35□□□□□ -0.43
GABRB3-207ENST00000554722 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.35□□□□□ -0.43
GABRB3-207ENST00000554722 AK3Q9UIJ7 227 aa12.35□□□□□ -0.43
GABRB3-207ENST00000554722 ARSBP15848 533 aa12.34□□□□□ -0.43
GABRB3-207ENST00000554722 C8orf86Q6ZUL3 223 aa12.34□□□□□ -0.43
GABRB3-207ENST00000554722 SETD6Q8TBK2 473 aa12.34□□□□□ -0.43
GABRB3-207ENST00000554722 IL1F10Q8WWZ1 152 aa12.34□□□□□ -0.43
GABRB3-207ENST00000554722 GALMQ96C23 342 aa12.34□□□□□ -0.43
GABRB3-207ENST00000554722 NABP2Q9BQ15 211 aa12.34□□□□□ -0.43
GABRB3-207ENST00000554722 IFI27L2Q9H2X8 130 aa12.34□□□□□ -0.43
GABRB3-207ENST00000554722 PLEKHJ1Q9NW61 149 aa12.34□□□□□ -0.43
GABRB3-207ENST00000554722 KMT2CQ8NEZ4 4911 aaKnown RBP12.34□□□□□ -0.43
GABRB3-207ENST00000554722 SAA2-SAA4A0A096LPE2 208 aa12.33□□□□□ -0.44
GABRB3-207ENST00000554722 WI2-2373I1.2A0A1W2PRP0 233 aa12.33□□□□□ -0.44
GABRB3-207ENST00000554722 LDLRAD4O15165 306 aa12.33□□□□□ -0.44
GABRB3-207ENST00000554722 ST8SIA5O15466 376 aa12.33□□□□□ -0.44
GABRB3-207ENST00000554722 TXNL1O43396 289 aa12.33□□□□□ -0.44
GABRB3-207ENST00000554722 SAA2P0DJI9 122 aaPredicted RBP12.33□□□□□ -0.44
GABRB3-207ENST00000554722 SLC2A2P11168 524 aaPredicted RBP12.33□□□□□ -0.44
GABRB3-207ENST00000554722 VEGFCP49767 419 aa12.33□□□□□ -0.44
GABRB3-207ENST00000554722 KRTAP10-11P60412 298 aa12.33□□□□□ -0.44
GABRB3-207ENST00000554722 TRAM1Q15629 374 aa12.33□□□□□ -0.44
GABRB3-207ENST00000554722 TBCEQ15813 527 aaPredicted RBP12.33□□□□□ -0.44
GABRB3-207ENST00000554722 C2orf76Q3KRA6 126 aa12.33□□□□□ -0.44
GABRB3-207ENST00000554722 LY6G6FQ5SQ64 297 aa12.33□□□□□ -0.44
GABRB3-207ENST00000554722 HES5Q5TA89 166 aa12.33□□□□□ -0.44
GABRB3-207ENST00000554722 ZNF833PQ6ZTB9 187 aa12.33□□□□□ -0.44
GABRB3-207ENST00000554722 OR2W3Q7Z3T1 314 aa12.33□□□□□ -0.44
GABRB3-207ENST00000554722 FOXRED2Q8IWF2 684 aa12.33□□□□□ -0.44
GABRB3-207ENST00000554722 LINC00482Q8N8I6 264 aa12.33□□□□□ -0.44
GABRB3-207ENST00000554722 DUX3Q96PT4 197 aa12.33□□□□□ -0.44
GABRB3-207ENST00000554722 ZNF251Q9BRH9 671 aa12.33□□□□□ -0.44
GABRB3-207ENST00000554722 VCX3BQ9H321 246 aa12.33□□□□□ -0.44
GABRB3-207ENST00000554722 CHMP1AQ9HD42 196 aaPredicted RBP12.33□□□□□ -0.44
GABRB3-207ENST00000554722 ACOT13Q9NPJ3 140 aa12.33□□□□□ -0.44
GABRB3-207ENST00000554722 ARL6IP5O75915 188 aa12.32□□□□□ -0.44
GABRB3-207ENST00000554722 ATP6V1G2O95670 118 aa12.32□□□□□ -0.44
GABRB3-207ENST00000554722 RPLP1P05386 114 aaKnown RBP12.32□□□□□ -0.44
GABRB3-207ENST00000554722 THBS3P49746 956 aa12.32□□□□□ -0.44
GABRB3-207ENST00000554722 OR10A3P58181 314 aa12.32□□□□□ -0.44
GABRB3-207ENST00000554722 EGFEM1PQ0D2K5 195 aa12.32□□□□□ -0.44
GABRB3-207ENST00000554722 RAB11BQ15907 218 aa12.32□□□□□ -0.44
GABRB3-207ENST00000554722 PLAC9Q5JTB6 97 aa12.32□□□□□ -0.44
GABRB3-207ENST00000554722 MRPL41Q8IXM3 137 aaKnown RBP12.32□□□□□ -0.44
GABRB3-207ENST00000554722 ARHGAP5-AS1Q96IT6 56 aa12.32□□□□□ -0.44
GABRB3-207ENST00000554722 RASL11BQ9BPW5 248 aa12.32□□□□□ -0.44
GABRB3-207ENST00000554722 MCRIP2Q9BUT9 160 aaKnown RBP12.32□□□□□ -0.44
GABRB3-207ENST00000554722 PECRQ9BY49 303 aa12.32□□□□□ -0.44
GABRB3-207ENST00000554722 OR1A1Q9P1Q5 309 aa12.32□□□□□ -0.44
GABRB3-207ENST00000554722 V9GY05 133 aa12.32□□□□□ -0.44
GABRB3-207ENST00000554722 TRBV6-6A0A0A6YYG2 114 aa12.31□□□□□ -0.44
GABRB3-207ENST00000554722 TMEM272A0A1B0GTI8 110 aa12.31□□□□□ -0.44
GABRB3-207ENST00000554722 AP4M1O00189 453 aa12.31□□□□□ -0.44
GABRB3-207ENST00000554722 SCTP09683 121 aa12.31□□□□□ -0.44
GABRB3-207ENST00000554722 SNRPBP14678 240 aaKnown RBP12.31□□□□□ -0.44
GABRB3-207ENST00000554722 PSMA1P25786 263 aaKnown RBP12.31□□□□□ -0.44
GABRB3-207ENST00000554722 SLC6A1P30531 599 aa12.31□□□□□ -0.44
GABRB3-207ENST00000554722 HOXD3P31249 432 aaPredicted RBP12.31□□□□□ -0.44
GABRB3-207ENST00000554722 HSPA13P48723 471 aa12.31□□□□□ -0.44
GABRB3-207ENST00000554722 ACTBP60709 375 aa12.31□□□□□ -0.44
GABRB3-207ENST00000554722 CFHR3Q02985 330 aa12.31□□□□□ -0.44
GABRB3-207ENST00000554722 MOGAT2Q3SYC2 334 aa12.31□□□□□ -0.44
GABRB3-207ENST00000554722 RPL39P5Q59GN2 51 aa12.31□□□□□ -0.44
GABRB3-207ENST00000554722 KLHL30-AS1Q8NEE0 82 aa12.31□□□□□ -0.44
GABRB3-207ENST00000554722 OR2AK2Q8NG84 335 aa12.31□□□□□ -0.44
GABRB3-207ENST00000554722 FAM3DQ96BQ1 224 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms