RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 ARSBP15848 533 aa8.24□□□□□ -1.09
PTCD2P1-201ENST00000554393 CALRP27797 417 aaKnown RBP8.24□□□□□ -1.09
PTCD2P1-201ENST00000554393 ZNF134P52741 427 aa8.24□□□□□ -1.09
PTCD2P1-201ENST00000554393 GABARAPL2P60520 117 aa8.24□□□□□ -1.09
PTCD2P1-201ENST00000554393 HMGN3Q15651 99 aa8.24□□□□□ -1.09
PTCD2P1-201ENST00000554393 C9orf152Q5JTZ5 239 aa8.24□□□□□ -1.09
PTCD2P1-201ENST00000554393 FAM53AQ6NSI3 398 aaPredicted RBP8.24□□□□□ -1.09
PTCD2P1-201ENST00000554393 ZNF880Q6PDB4 577 aa8.24□□□□□ -1.09
PTCD2P1-201ENST00000554393 C6orf201Q7Z4U5 140 aa8.24□□□□□ -1.09
PTCD2P1-201ENST00000554393 FOXRED2Q8IWF2 684 aa8.24□□□□□ -1.09
PTCD2P1-201ENST00000554393 FAM89BQ8N5H3 189 aa8.24□□□□□ -1.09
PTCD2P1-201ENST00000554393 OR10V1Q8NGI7 309 aa8.24□□□□□ -1.09
PTCD2P1-201ENST00000554393 GALMQ96C23 342 aa8.24□□□□□ -1.09
PTCD2P1-201ENST00000554393 YPEL2Q96QA6 119 aa8.24□□□□□ -1.09
PTCD2P1-201ENST00000554393 GFI1Q99684 422 aa8.24□□□□□ -1.09
PTCD2P1-201ENST00000554393 NICN1Q9BSH3 213 aa8.24□□□□□ -1.09
PTCD2P1-201ENST00000554393 FAAP24Q9BTP7 215 aa8.24□□□□□ -1.09
PTCD2P1-201ENST00000554393 ABHD14AQ9BUJ0 271 aa8.24□□□□□ -1.09
PTCD2P1-201ENST00000554393 LPAR5Q9H1C0 372 aa8.24□□□□□ -1.09
PTCD2P1-201ENST00000554393 RIMS4Q9H426 269 aaPredicted RBP8.24□□□□□ -1.09
PTCD2P1-201ENST00000554393 PLGRKTQ9HBL7 147 aa8.24□□□□□ -1.09
PTCD2P1-201ENST00000554393 ABRACLQ9P1F3 81 aa8.24□□□□□ -1.09
PTCD2P1-201ENST00000554393 HSF4Q9ULV5 492 aa8.24□□□□□ -1.09
PTCD2P1-201ENST00000554393 LOC100996750A0A140TA64 210 aa8.23□□□□□ -1.09
PTCD2P1-201ENST00000554393 SERPINE3A8MV23 424 aa8.23□□□□□ -1.09
PTCD2P1-201ENST00000554393 G3V4G9 280 aa8.23□□□□□ -1.09
PTCD2P1-201ENST00000554393 ATP6V1G2O95670 118 aa8.23□□□□□ -1.09
PTCD2P1-201ENST00000554393 GALP22466 123 aa8.23□□□□□ -1.09
PTCD2P1-201ENST00000554393 BLVRBP30043 206 aaPredicted RBP8.23□□□□□ -1.09
PTCD2P1-201ENST00000554393 SLC6A1P30531 599 aa8.23□□□□□ -1.09
PTCD2P1-201ENST00000554393 MAP2K4P45985 399 aa8.23□□□□□ -1.09
PTCD2P1-201ENST00000554393 FABP5Q01469 135 aa8.23□□□□□ -1.09
PTCD2P1-201ENST00000554393 HNF4GQ14541 408 aa8.23□□□□□ -1.09
PTCD2P1-201ENST00000554393 GNMTQ14749 295 aa8.23□□□□□ -1.09
PTCD2P1-201ENST00000554393 RAB11BQ15907 218 aa8.23□□□□□ -1.09
PTCD2P1-201ENST00000554393 FAM71F2Q6NXP2 309 aa8.23□□□□□ -1.09
PTCD2P1-201ENST00000554393 CD200R1LQ6Q8B3 271 aa8.23□□□□□ -1.09
PTCD2P1-201ENST00000554393 SLC35E3Q7Z769 313 aa8.23□□□□□ -1.09
PTCD2P1-201ENST00000554393 C1QL4Q86Z23 238 aa8.23□□□□□ -1.09
PTCD2P1-201ENST00000554393 COMMD1Q8N668 190 aa8.23□□□□□ -1.09
PTCD2P1-201ENST00000554393 Q8N9W7 124 aa8.23□□□□□ -1.09
PTCD2P1-201ENST00000554393 WFDC9Q8NEX5 89 aa8.23□□□□□ -1.09
PTCD2P1-201ENST00000554393 KRTAP4-6Q9BYQ5 205 aa8.23□□□□□ -1.09
PTCD2P1-201ENST00000554393 ABCG5Q9H222 651 aa8.23□□□□□ -1.09
PTCD2P1-201ENST00000554393 KCNK15Q9H427 330 aa8.23□□□□□ -1.09
PTCD2P1-201ENST00000554393 PLEKHJ1Q9NW61 149 aa8.23□□□□□ -1.09
PTCD2P1-201ENST00000554393 NDUFB11Q9NX14 153 aa8.23□□□□□ -1.09
PTCD2P1-201ENST00000554393 MGAT4AQ9UM21 535 aa8.23□□□□□ -1.09
PTCD2P1-201ENST00000554393 V9GY05 133 aa8.23□□□□□ -1.09
PTCD2P1-201ENST00000554393 A0A0A6YYD4 124 aa8.22□□□□□ -1.09
PTCD2P1-201ENST00000554393 IGHV3-72A0A0B4J1Y9 119 aa8.22□□□□□ -1.09
PTCD2P1-201ENST00000554393 TRAV1-2A0A0B4J238 106 aa8.22□□□□□ -1.09
PTCD2P1-201ENST00000554393 FOXI3A8MTJ6 420 aaPredicted RBP8.22□□□□□ -1.09
PTCD2P1-201ENST00000554393 AP4M1O00189 453 aa8.22□□□□□ -1.09
PTCD2P1-201ENST00000554393 PF4V1P10720 104 aa8.22□□□□□ -1.09
PTCD2P1-201ENST00000554393 PPP1CCP36873 323 aaKnown RBP8.22□□□□□ -1.09
PTCD2P1-201ENST00000554393 GPR12P47775 334 aa8.22□□□□□ -1.09
PTCD2P1-201ENST00000554393 SLC35B1P78383 322 aa8.22□□□□□ -1.09
PTCD2P1-201ENST00000554393 LSAMPQ13449 338 aa8.22□□□□□ -1.09
PTCD2P1-201ENST00000554393 P2RY14Q15391 338 aa8.22□□□□□ -1.09
PTCD2P1-201ENST00000554393 SSX1Q16384 188 aa8.22□□□□□ -1.09
PTCD2P1-201ENST00000554393 ZNF833PQ6ZTB9 187 aa8.22□□□□□ -1.09
PTCD2P1-201ENST00000554393 REC114Q7Z4M0 266 aa8.22□□□□□ -1.09
PTCD2P1-201ENST00000554393 ODF3L1Q8IXM7 274 aa8.22□□□□□ -1.09
PTCD2P1-201ENST00000554393 FAM71E2Q8N5Q1 922 aa8.22□□□□□ -1.09
PTCD2P1-201ENST00000554393 OR2AK2Q8NG84 335 aa8.22□□□□□ -1.09
PTCD2P1-201ENST00000554393 OR52L2PQ8NGH6 319 aa8.22□□□□□ -1.09
PTCD2P1-201ENST00000554393 CYYR1Q96J86 154 aa8.22□□□□□ -1.09
PTCD2P1-201ENST00000554393 S1PR3Q99500 378 aa8.22□□□□□ -1.09
PTCD2P1-201ENST00000554393 GON7Q9BXV9 100 aa8.22□□□□□ -1.09
PTCD2P1-201ENST00000554393 GHITMQ9H3K2 345 aa8.22□□□□□ -1.09
PTCD2P1-201ENST00000554393 Q9H521 79 aa8.22□□□□□ -1.09
PTCD2P1-201ENST00000554393 CHMP1AQ9HD42 196 aaPredicted RBP8.22□□□□□ -1.09
PTCD2P1-201ENST00000554393 C12orf4Q9NQ89 552 aa8.22□□□□□ -1.09
PTCD2P1-201ENST00000554393 PLSCR3Q9NRY6 295 aa8.22□□□□□ -1.09
PTCD2P1-201ENST00000554393 ZFP57Q9NU63 452 aa8.22□□□□□ -1.09
PTCD2P1-201ENST00000554393 STEAP1Q9UHE8 339 aa8.22□□□□□ -1.09
PTCD2P1-201ENST00000554393 ZNF580Q9UK33 172 aa8.22□□□□□ -1.09
PTCD2P1-201ENST00000554393 AK6Q9Y3D8 172 aaKnown RBP8.22□□□□□ -1.09
PTCD2P1-201ENST00000554393 A0A1W2PRX2 142 aa8.21□□□□□ -1.1
PTCD2P1-201ENST00000554393 NCBP2LA6PVI3 153 aaKnown RBP8.21□□□□□ -1.1
PTCD2P1-201ENST00000554393 ZNF736B4DX44 427 aaPredicted RBP8.21□□□□□ -1.1
PTCD2P1-201ENST00000554393 ITGB1BP1O14713 200 aa8.21□□□□□ -1.1
PTCD2P1-201ENST00000554393 PDCD5O14737 125 aa8.21□□□□□ -1.1
PTCD2P1-201ENST00000554393 LDLRAD4O15165 306 aa8.21□□□□□ -1.1
PTCD2P1-201ENST00000554393 SOCS1O15524 211 aa8.21□□□□□ -1.1
PTCD2P1-201ENST00000554393 RRP9O43818 475 aaKnown RBP8.21□□□□□ -1.1
PTCD2P1-201ENST00000554393 PF4P02776 101 aa8.21□□□□□ -1.1
PTCD2P1-201ENST00000554393 C10orf99Q6UWK7 81 aa8.21□□□□□ -1.1
PTCD2P1-201ENST00000554393 Q6ZPA2 131 aa8.21□□□□□ -1.1
PTCD2P1-201ENST00000554393 STPG2Q8N412 459 aa8.21□□□□□ -1.1
PTCD2P1-201ENST00000554393 OR51D1Q8NGF3 324 aa8.21□□□□□ -1.1
PTCD2P1-201ENST00000554393 OR56B1Q8NGI3 324 aa8.21□□□□□ -1.1
PTCD2P1-201ENST00000554393 FAM3DQ96BQ1 224 aa8.21□□□□□ -1.1
PTCD2P1-201ENST00000554393 NOL4LQ96MY1 436 aaPredicted RBP8.21□□□□□ -1.1
PTCD2P1-201ENST00000554393 RASL11BQ9BPW5 248 aa8.21□□□□□ -1.1
PTCD2P1-201ENST00000554393 IFI27L2Q9H2X8 130 aa8.21□□□□□ -1.1
PTCD2P1-201ENST00000554393 PIPOXQ9P0Z9 390 aa8.21□□□□□ -1.1
PTCD2P1-201ENST00000554393 AK3Q9UIJ7 227 aa8.21□□□□□ -1.1
PTCD2P1-201ENST00000554393 SAA2-SAA4A0A096LPE2 208 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms