RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 TMEM30BQ3MIR4 351 aa9.3□□□□□ -0.92
SRP54-203ENST00000553544 C6orf183Q5T699 404 aa9.3□□□□□ -0.92
SRP54-203ENST00000553544 OR10K2Q6IF99 312 aa9.3□□□□□ -0.92
SRP54-203ENST00000553544 SLC25A48Q6ZT89 311 aaKnown RBP9.3□□□□□ -0.92
SRP54-203ENST00000553544 ZNF554Q86TJ5 538 aa9.3□□□□□ -0.92
SRP54-203ENST00000553544 KCNG3Q8TAE7 436 aa9.3□□□□□ -0.92
SRP54-203ENST00000553544 MRPL30Q8TCC3 161 aaKnown RBP9.3□□□□□ -0.92
SRP54-203ENST00000553544 CHPT1Q8WUD6 406 aa9.3□□□□□ -0.92
SRP54-203ENST00000553544 PRR25Q96S07 402 aa9.3□□□□□ -0.92
SRP54-203ENST00000553544 GFI1Q99684 422 aa9.3□□□□□ -0.92
SRP54-203ENST00000553544 URM1Q9BTM9 101 aaKnown RBP9.3□□□□□ -0.92
SRP54-203ENST00000553544 TM2D1Q9BX74 207 aa9.3□□□□□ -0.92
SRP54-203ENST00000553544 PALMDQ9NP74 551 aa9.3□□□□□ -0.92
SRP54-203ENST00000553544 STUB1Q9UNE7 303 aa9.3□□□□□ -0.92
SRP54-203ENST00000553544 MOB4Q9Y3A3 225 aa9.3□□□□□ -0.92
SRP54-203ENST00000553544 TRAV1-2A0A0B4J238 106 aa9.29□□□□□ -0.92
SRP54-203ENST00000553544 LCE6AA0A183 80 aa9.29□□□□□ -0.92
SRP54-203ENST00000553544 UBE2QL1A1L167 161 aa9.29□□□□□ -0.92
SRP54-203ENST00000553544 SLC31A2O15432 143 aa9.29□□□□□ -0.92
SRP54-203ENST00000553544 SPINT2O43291 252 aa9.29□□□□□ -0.92
SRP54-203ENST00000553544 FGF16O43320 207 aa9.29□□□□□ -0.92
SRP54-203ENST00000553544 ECI1P42126 302 aa9.29□□□□□ -0.92
SRP54-203ENST00000553544 RAB25P57735 213 aa9.29□□□□□ -0.92
SRP54-203ENST00000553544 SLC35B1P78383 322 aa9.29□□□□□ -0.92
SRP54-203ENST00000553544 CT45A1Q5HYN5 189 aa9.29□□□□□ -0.92
SRP54-203ENST00000553544 C9orf66Q5T8R8 295 aa9.29□□□□□ -0.92
SRP54-203ENST00000553544 STEAP3Q658P3 488 aa9.29□□□□□ -0.92
SRP54-203ENST00000553544 TRAT1Q6PIZ9 186 aa9.29□□□□□ -0.92
SRP54-203ENST00000553544 C18orf65Q6ZTR6 163 aa9.29□□□□□ -0.92
SRP54-203ENST00000553544 ZNF695Q8IW36 515 aa9.29□□□□□ -0.92
SRP54-203ENST00000553544 COMMD1Q8N668 190 aa9.29□□□□□ -0.92
SRP54-203ENST00000553544 Q8N6K4 173 aa9.29□□□□□ -0.92
SRP54-203ENST00000553544 C5orf56Q8N8D9 126 aa9.29□□□□□ -0.92
SRP54-203ENST00000553544 KLHL30-AS1Q8NEE0 82 aa9.29□□□□□ -0.92
SRP54-203ENST00000553544 OR1L1Q8NH94 360 aa9.29□□□□□ -0.92
SRP54-203ENST00000553544 CT45A3Q8NHU0 189 aa9.29□□□□□ -0.92
SRP54-203ENST00000553544 RTN4IP1Q8WWV3 396 aaPredicted RBP9.29□□□□□ -0.92
SRP54-203ENST00000553544 SULT4A1Q9BR01 284 aa9.29□□□□□ -0.92
SRP54-203ENST00000553544 TMEM59Q9BXS4 323 aa9.29□□□□□ -0.92
SRP54-203ENST00000553544 TAF9BQ9HBM6 251 aa9.29□□□□□ -0.92
SRP54-203ENST00000553544 SSR3Q9UNL2 185 aa9.29□□□□□ -0.92
SRP54-203ENST00000553544 RYR2Q92736 4967 aa9.28□□□□□ -0.92
SRP54-203ENST00000553544 BIRC6Q9NR09 4857 aa9.28□□□□□ -0.92
SRP54-203ENST00000553544 CCL24O00175 119 aa9.28□□□□□ -0.92
SRP54-203ENST00000553544 SLC17A2O00624 439 aa9.28□□□□□ -0.92
SRP54-203ENST00000553544 IGKV1D-33P01593 117 aa9.28□□□□□ -0.92
SRP54-203ENST00000553544 IGKV1-33P01594 117 aa9.28□□□□□ -0.92
SRP54-203ENST00000553544 ARSBP15848 533 aa9.28□□□□□ -0.92
SRP54-203ENST00000553544 TMEM11P17152 192 aa9.28□□□□□ -0.92
SRP54-203ENST00000553544 REG1BP48304 166 aa9.28□□□□□ -0.92
SRP54-203ENST00000553544 FABP5Q01469 135 aa9.28□□□□□ -0.92
SRP54-203ENST00000553544 HES1Q14469 280 aa9.28□□□□□ -0.92
SRP54-203ENST00000553544 RAB11BQ15907 218 aa9.28□□□□□ -0.92
SRP54-203ENST00000553544 CD200R1LQ6Q8B3 271 aa9.28□□□□□ -0.92
SRP54-203ENST00000553544 C5orf24Q7Z6I8 188 aa9.28□□□□□ -0.92
SRP54-203ENST00000553544 IZUMO1Q8IYV9 350 aa9.28□□□□□ -0.92
SRP54-203ENST00000553544 TSPAN14Q8NG11 270 aa9.28□□□□□ -0.92
SRP54-203ENST00000553544 EAF1Q96JC9 268 aaPredicted RBP9.28□□□□□ -0.92
SRP54-203ENST00000553544 NICN1Q9BSH3 213 aa9.28□□□□□ -0.92
SRP54-203ENST00000553544 KCNK15Q9H427 330 aa9.28□□□□□ -0.92
SRP54-203ENST00000553544 GNG12Q9UBI6 72 aa9.28□□□□□ -0.92
SRP54-203ENST00000553544 V9GY05 133 aa9.28□□□□□ -0.92
SRP54-203ENST00000553544 EPPK1P58107 5090 aaKnown RBP9.27□□□□□ -0.92
SRP54-203ENST00000553544 DYNC2H1Q8NCM8 4307 aaKnown RBP9.27□□□□□ -0.93
SRP54-203ENST00000553544 A0A0A6YYD4 124 aa9.27□□□□□ -0.93
SRP54-203ENST00000553544 SERPINE3A8MV23 424 aa9.27□□□□□ -0.93
SRP54-203ENST00000553544 NAPSAO96009 420 aa9.27□□□□□ -0.93
SRP54-203ENST00000553544 IL3RAP26951 378 aa9.27□□□□□ -0.93
SRP54-203ENST00000553544 CD1BP29016 333 aa9.27□□□□□ -0.93
SRP54-203ENST00000553544 FGF9P31371 208 aaPredicted RBP9.27□□□□□ -0.93
SRP54-203ENST00000553544 LUMP51884 338 aaPredicted RBP9.27□□□□□ -0.93
SRP54-203ENST00000553544 HTD2P86397 168 aa9.27□□□□□ -0.93
SRP54-203ENST00000553544 HNF4GQ14541 408 aa9.27□□□□□ -0.93
SRP54-203ENST00000553544 HMGN3Q15651 99 aa9.27□□□□□ -0.93
SRP54-203ENST00000553544 NEDD8Q15843 81 aa9.27□□□□□ -0.93
SRP54-203ENST00000553544 SSX1Q16384 188 aa9.27□□□□□ -0.93
SRP54-203ENST00000553544 MORN2Q502X0 79 aa9.27□□□□□ -0.93
SRP54-203ENST00000553544 LY6G6FQ5SQ64 297 aa9.27□□□□□ -0.93
SRP54-203ENST00000553544 ZNF880Q6PDB4 577 aa9.27□□□□□ -0.93
SRP54-203ENST00000553544 C6orf201Q7Z4U5 140 aa9.27□□□□□ -0.93
SRP54-203ENST00000553544 MOB3BQ86TA1 216 aa9.27□□□□□ -0.93
SRP54-203ENST00000553544 TPRA1Q86W33 373 aa9.27□□□□□ -0.93
SRP54-203ENST00000553544 PRR18Q8N4B5 295 aa9.27□□□□□ -0.93
SRP54-203ENST00000553544 FAM89BQ8N5H3 189 aa9.27□□□□□ -0.93
SRP54-203ENST00000553544 OR5M8Q8NGP6 311 aa9.27□□□□□ -0.93
SRP54-203ENST00000553544 RAX2Q96IS3 184 aa9.27□□□□□ -0.93
SRP54-203ENST00000553544 KCTD7Q96MP8 289 aa9.27□□□□□ -0.93
SRP54-203ENST00000553544 NOL4LQ96MY1 436 aaPredicted RBP9.27□□□□□ -0.93
SRP54-203ENST00000553544 RCHY1Q96PM5 261 aa9.27□□□□□ -0.93
SRP54-203ENST00000553544 DUX3Q96PT4 197 aa9.27□□□□□ -0.93
SRP54-203ENST00000553544 NEDD4LQ96PU5 975 aa9.27□□□□□ -0.93
SRP54-203ENST00000553544 FAAP24Q9BTP7 215 aa9.27□□□□□ -0.93
SRP54-203ENST00000553544 LPAR5Q9H1C0 372 aa9.27□□□□□ -0.93
SRP54-203ENST00000553544 OR2S2Q9NQN1 319 aa9.27□□□□□ -0.93
SRP54-203ENST00000553544 PLSCR3Q9NRY6 295 aa9.27□□□□□ -0.93
SRP54-203ENST00000553544 GAR1Q9NY12 217 aaKnown RBP9.27□□□□□ -0.93
SRP54-203ENST00000553544 JPT1Q9UK76 154 aa9.27□□□□□ -0.93
SRP54-203ENST00000553544 AK6Q9Y3D8 172 aaKnown RBP9.27□□□□□ -0.93
SRP54-203ENST00000553544 IGHV3-72A0A0B4J1Y9 119 aa9.26□□□□□ -0.93
SRP54-203ENST00000553544 FOXI3A8MTJ6 420 aaPredicted RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms