RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 NOL4LQ96MY1 436 aaPredicted RBP10.24□□□□□ -0.77
ACTN1-207ENST00000553290 S1PR3Q99500 378 aa10.24□□□□□ -0.77
ACTN1-207ENST00000553290 GFI1Q99684 422 aa10.24□□□□□ -0.77
ACTN1-207ENST00000553290 RASL11BQ9BPW5 248 aa10.24□□□□□ -0.77
ACTN1-207ENST00000553290 LPAR5Q9H1C0 372 aa10.24□□□□□ -0.77
ACTN1-207ENST00000553290 KCNK15Q9H427 330 aa10.24□□□□□ -0.77
ACTN1-207ENST00000553290 CHMP1AQ9HD42 196 aaPredicted RBP10.24□□□□□ -0.77
ACTN1-207ENST00000553290 PLSCR3Q9NRY6 295 aa10.24□□□□□ -0.77
ACTN1-207ENST00000553290 STEAP1Q9UHE8 339 aa10.24□□□□□ -0.77
ACTN1-207ENST00000553290 AK6Q9Y3D8 172 aaKnown RBP10.24□□□□□ -0.77
ACTN1-207ENST00000553290 A0A0A6YYD4 124 aa10.23□□□□□ -0.77
ACTN1-207ENST00000553290 ZNF736B4DX44 427 aaPredicted RBP10.23□□□□□ -0.77
ACTN1-207ENST00000553290 CALRP27797 417 aaKnown RBP10.23□□□□□ -0.77
ACTN1-207ENST00000553290 SLC6A1P30531 599 aa10.23□□□□□ -0.77
ACTN1-207ENST00000553290 GPR12P47775 334 aa10.23□□□□□ -0.77
ACTN1-207ENST00000553290 FABP5Q01469 135 aa10.23□□□□□ -0.77
ACTN1-207ENST00000553290 LSAMPQ13449 338 aa10.23□□□□□ -0.77
ACTN1-207ENST00000553290 P2RY14Q15391 338 aa10.23□□□□□ -0.77
ACTN1-207ENST00000553290 RAB11BQ15907 218 aa10.23□□□□□ -0.77
ACTN1-207ENST00000553290 ZNF880Q6PDB4 577 aa10.23□□□□□ -0.77
ACTN1-207ENST00000553290 ZNF367Q7RTV3 350 aa10.23□□□□□ -0.77
ACTN1-207ENST00000553290 SVOPQ8N4V2 548 aa10.23□□□□□ -0.77
ACTN1-207ENST00000553290 GON7Q9BXV9 100 aa10.23□□□□□ -0.77
ACTN1-207ENST00000553290 ZFP57Q9NU63 452 aa10.23□□□□□ -0.77
ACTN1-207ENST00000553290 LINC00527Q9UJ94 153 aa10.23□□□□□ -0.77
ACTN1-207ENST00000553290 HSF4Q9ULV5 492 aa10.23□□□□□ -0.77
ACTN1-207ENST00000553290 MGAT4AQ9UM21 535 aa10.23□□□□□ -0.77
ACTN1-207ENST00000553290 V9GY05 133 aa10.23□□□□□ -0.77
ACTN1-207ENST00000553290 PRKDCP78527 4128 aaKnown RBP10.23□□□□□ -0.77
ACTN1-207ENST00000553290 TRBV6-6A0A0A6YYG2 114 aa10.22□□□□□ -0.77
ACTN1-207ENST00000553290 SOCS1O15524 211 aa10.22□□□□□ -0.77
ACTN1-207ENST00000553290 F2RL1P55085 397 aa10.22□□□□□ -0.77
ACTN1-207ENST00000553290 RPL23AP62750 156 aaKnown RBP10.22□□□□□ -0.77
ACTN1-207ENST00000553290 C5orf24Q7Z6I8 188 aa10.22□□□□□ -0.77
ACTN1-207ENST00000553290 ODF3L1Q8IXM7 274 aa10.22□□□□□ -0.77
ACTN1-207ENST00000553290 FAM71E2Q8N5Q1 922 aa10.22□□□□□ -0.77
ACTN1-207ENST00000553290 OR2AK2Q8NG84 335 aa10.22□□□□□ -0.77
ACTN1-207ENST00000553290 OR51D1Q8NGF3 324 aa10.22□□□□□ -0.77
ACTN1-207ENST00000553290 SETD6Q8TBK2 473 aa10.22□□□□□ -0.77
ACTN1-207ENST00000553290 IL1F10Q8WWZ1 152 aa10.22□□□□□ -0.77
ACTN1-207ENST00000553290 FAM3DQ96BQ1 224 aa10.22□□□□□ -0.77
ACTN1-207ENST00000553290 RCC1LQ96I51 464 aaKnown RBP10.22□□□□□ -0.77
ACTN1-207ENST00000553290 TRAV1-2A0A0B4J238 106 aa10.21□□□□□ -0.77
ACTN1-207ENST00000553290 LINC01548A6NM66 108 aa10.21□□□□□ -0.77
ACTN1-207ENST00000553290 RRP9O43818 475 aaKnown RBP10.21□□□□□ -0.77
ACTN1-207ENST00000553290 MRPS14O60783 128 aaKnown RBP10.21□□□□□ -0.77
ACTN1-207ENST00000553290 DUS4LO95620 317 aaKnown RBP10.21□□□□□ -0.77
ACTN1-207ENST00000553290 ATP6V1G2O95670 118 aa10.21□□□□□ -0.77
ACTN1-207ENST00000553290 SOX6P35712 828 aa10.21□□□□□ -0.77
ACTN1-207ENST00000553290 VEGFCP49767 419 aa10.21□□□□□ -0.77
ACTN1-207ENST00000553290 PNLIPRP3Q17RR3 467 aa10.21□□□□□ -0.77
ACTN1-207ENST00000553290 C2orf76Q3KRA6 126 aa10.21□□□□□ -0.77
ACTN1-207ENST00000553290 FAM71F2Q6NXP2 309 aa10.21□□□□□ -0.77
ACTN1-207ENST00000553290 TEX38Q6PEX7 206 aa10.21□□□□□ -0.77
ACTN1-207ENST00000553290 ZNF833PQ6ZTB9 187 aa10.21□□□□□ -0.77
ACTN1-207ENST00000553290 OR56B1Q8NGI3 324 aa10.21□□□□□ -0.77
ACTN1-207ENST00000553290 PHF21AQ96BD5 680 aa10.21□□□□□ -0.77
ACTN1-207ENST00000553290 NABP2Q9BQ15 211 aa10.21□□□□□ -0.77
ACTN1-207ENST00000553290 GHITMQ9H3K2 345 aa10.21□□□□□ -0.77
ACTN1-207ENST00000553290 NECAP2Q9NVZ3 263 aa10.21□□□□□ -0.77
ACTN1-207ENST00000553290 PIPOXQ9P0Z9 390 aa10.21□□□□□ -0.77
ACTN1-207ENST00000553290 AK3Q9UIJ7 227 aa10.21□□□□□ -0.77
ACTN1-207ENST00000553290 SAA2-SAA4A0A096LPE2 208 aa10.2□□□□□ -0.78
ACTN1-207ENST00000553290 FOXI3A8MTJ6 420 aaPredicted RBP10.2□□□□□ -0.78
ACTN1-207ENST00000553290 ITGB1BP1O14713 200 aa10.2□□□□□ -0.78
ACTN1-207ENST00000553290 PDCD5O14737 125 aa10.2□□□□□ -0.78
ACTN1-207ENST00000553290 RAB29O14966 203 aa10.2□□□□□ -0.78
ACTN1-207ENST00000553290 DENRO43583 198 aaKnown RBP10.2□□□□□ -0.78
ACTN1-207ENST00000553290 SAA2P0DJI9 122 aaPredicted RBP10.2□□□□□ -0.78
ACTN1-207ENST00000553290 IGLL1P15814 213 aa10.2□□□□□ -0.78
ACTN1-207ENST00000553290 TMEM50BP56557 158 aa10.2□□□□□ -0.78
ACTN1-207ENST00000553290 CLDN12P56749 244 aa10.2□□□□□ -0.78
ACTN1-207ENST00000553290 GABARAPL2P60520 117 aa10.2□□□□□ -0.78
ACTN1-207ENST00000553290 MMDQ15546 238 aa10.2□□□□□ -0.78
ACTN1-207ENST00000553290 SSX1Q16384 188 aa10.2□□□□□ -0.78
ACTN1-207ENST00000553290 CD200R1LQ6Q8B3 271 aa10.2□□□□□ -0.78
ACTN1-207ENST00000553290 Q6ZPA2 131 aa10.2□□□□□ -0.78
ACTN1-207ENST00000553290 PECRQ9BY49 303 aa10.2□□□□□ -0.78
ACTN1-207ENST00000553290 MRPL20Q9BYC9 149 aaKnown RBP10.2□□□□□ -0.78
ACTN1-207ENST00000553290 IFI27L2Q9H2X8 130 aa10.2□□□□□ -0.78
ACTN1-207ENST00000553290 C12orf4Q9NQ89 552 aa10.2□□□□□ -0.78
ACTN1-207ENST00000553290 NDUFB11Q9NX14 153 aa10.2□□□□□ -0.78
ACTN1-207ENST00000553290 SLC23A1Q9UHI7 598 aa10.2□□□□□ -0.78
ACTN1-207ENST00000553290 ZNF580Q9UK33 172 aa10.2□□□□□ -0.78
ACTN1-207ENST00000553290 RAB22AQ9UL26 194 aa10.2□□□□□ -0.78
ACTN1-207ENST00000553290 TMEM272A0A1B0GTI8 110 aa10.19□□□□□ -0.78
ACTN1-207ENST00000553290 TRDV1A0A1B0GX56 115 aa10.19□□□□□ -0.78
ACTN1-207ENST00000553290 NUDT19A8MXV4 375 aa10.19□□□□□ -0.78
ACTN1-207ENST00000553290 LDLRAD4O15165 306 aa10.19□□□□□ -0.78
ACTN1-207ENST00000553290 HSPA12AO43301 675 aa10.19□□□□□ -0.78
ACTN1-207ENST00000553290 PRB2P02812 416 aaPredicted RBP10.19□□□□□ -0.78
ACTN1-207ENST00000553290 GALP22466 123 aa10.19□□□□□ -0.78
ACTN1-207ENST00000553290 ZBTB25P24278 435 aa10.19□□□□□ -0.78
ACTN1-207ENST00000553290 MYL9P24844 172 aa10.19□□□□□ -0.78
ACTN1-207ENST00000553290 OR3A3P47888 321 aa10.19□□□□□ -0.78
ACTN1-207ENST00000553290 THBS3P49746 956 aa10.19□□□□□ -0.78
ACTN1-207ENST00000553290 ACTBP60709 375 aa10.19□□□□□ -0.78
ACTN1-207ENST00000553290 HLA-DRB3P79483 266 aa10.19□□□□□ -0.78
ACTN1-207ENST00000553290 FOXE3Q13461 319 aa10.19□□□□□ -0.78
ACTN1-207ENST00000553290 CXorf66Q5JRM2 361 aaPredicted RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms