RNA–Protein interactions for RNA: ENST00000552973.1

NEK3-204, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-204ENST00000552973 UBE2E2Q96LR5 201 aa8.92□□□□□ -0.98
NEK3-204ENST00000552973 SULT4A1Q9BR01 284 aa8.92□□□□□ -0.98
NEK3-204ENST00000552973 JPT1Q9UK76 154 aa8.92□□□□□ -0.98
NEK3-204ENST00000552973 VSIG4Q9Y279 399 aa8.92□□□□□ -0.98
NEK3-204ENST00000552973 ZNF256Q9Y2P7 627 aaPredicted RBP8.92□□□□□ -0.98
NEK3-204ENST00000552973 TRAV41A0A0B4J266 112 aa8.91□□□□□ -0.98
NEK3-204ENST00000552973 FAM90A10PA6NDY2 464 aa8.91□□□□□ -0.98
NEK3-204ENST00000552973 FAM90A7PA6NKC0 464 aa8.91□□□□□ -0.98
NEK3-204ENST00000552973 FAM90A23PA8MXZ1 464 aa8.91□□□□□ -0.98
NEK3-204ENST00000552973 I3L521 148 aa8.91□□□□□ -0.98
NEK3-204ENST00000552973 NBR2O15453 112 aa8.91□□□□□ -0.98
NEK3-204ENST00000552973 ST8SIA5O15466 376 aa8.91□□□□□ -0.98
NEK3-204ENST00000552973 YPEL1O60688 119 aa8.91□□□□□ -0.98
NEK3-204ENST00000552973 PDCD6O75340 191 aa8.91□□□□□ -0.98
NEK3-204ENST00000552973 RAB9AP51151 201 aa8.91□□□□□ -0.98
NEK3-204ENST00000552973 ZNF616Q08AN1 781 aa8.91□□□□□ -0.98
NEK3-204ENST00000552973 ECSCRQ19T08 205 aa8.91□□□□□ -0.98
NEK3-204ENST00000552973 LAIR2Q6ISS4 152 aa8.91□□□□□ -0.98
NEK3-204ENST00000552973 CDH26Q8IXH8 852 aa8.91□□□□□ -0.98
NEK3-204ENST00000552973 DHRSXQ8N5I4 330 aa8.91□□□□□ -0.98
NEK3-204ENST00000552973 SETD9Q8NE22 299 aa8.91□□□□□ -0.98
NEK3-204ENST00000552973 SETD6Q8TBK2 473 aa8.91□□□□□ -0.98
NEK3-204ENST00000552973 MYOZ3Q8TDC0 251 aa8.91□□□□□ -0.98
NEK3-204ENST00000552973 IL1F10Q8WWZ1 152 aa8.91□□□□□ -0.98
NEK3-204ENST00000552973 YPEL2Q96QA6 119 aa8.91□□□□□ -0.98
NEK3-204ENST00000552973 FAAP24Q9BTP7 215 aa8.91□□□□□ -0.98
NEK3-204ENST00000552973 KCNK15Q9H427 330 aa8.91□□□□□ -0.98
NEK3-204ENST00000552973 FBXO7Q9Y3I1 522 aa8.91□□□□□ -0.98
NEK3-204ENST00000552973 A3GALT2U3KPV4 340 aa8.91□□□□□ -0.98
NEK3-204ENST00000552973 SAA2-SAA4A0A096LPE2 208 aa8.9□□□□□ -0.98
NEK3-204ENST00000552973 A0A1W2PN81 502 aa8.9□□□□□ -0.98
NEK3-204ENST00000552973 EFCAB10A6NFE3 127 aa8.9□□□□□ -0.98
NEK3-204ENST00000552973 MYL12BO14950 172 aa8.9□□□□□ -0.98
NEK3-204ENST00000552973 IGLV1-40P01703 118 aa8.9□□□□□ -0.98
NEK3-204ENST00000552973 HLA-DRB1P01911 266 aa8.9□□□□□ -0.98
NEK3-204ENST00000552973 GLAP06280 429 aa8.9□□□□□ -0.98
NEK3-204ENST00000552973 OR8U8P0C7N1 319 aa8.9□□□□□ -0.98
NEK3-204ENST00000552973 SAA2P0DJI9 122 aaPredicted RBP8.9□□□□□ -0.98
NEK3-204ENST00000552973 CHRNA7P36544 502 aa8.9□□□□□ -0.98
NEK3-204ENST00000552973 SLURP1P55000 103 aa8.9□□□□□ -0.98
NEK3-204ENST00000552973 TAS2R43P59537 309 aa8.9□□□□□ -0.98
NEK3-204ENST00000552973 HTD2P86397 168 aa8.9□□□□□ -0.98
NEK3-204ENST00000552973 NDPQ00604 133 aa8.9□□□□□ -0.98
NEK3-204ENST00000552973 C5orf64Q2M2E5 130 aa8.9□□□□□ -0.98
NEK3-204ENST00000552973 RPL39P5Q59GN2 51 aa8.9□□□□□ -0.98
NEK3-204ENST00000552973 FAM27D1Q5T7N8 215 aa8.9□□□□□ -0.98
NEK3-204ENST00000552973 GLDNQ6ZMI3 551 aaPredicted RBP8.9□□□□□ -0.98
NEK3-204ENST00000552973 ZNF833PQ6ZTB9 187 aa8.9□□□□□ -0.98
NEK3-204ENST00000552973 AHSA2Q719I0 299 aa8.9□□□□□ -0.98
NEK3-204ENST00000552973 OVCH2Q7RTZ1 564 aa8.9□□□□□ -0.98
NEK3-204ENST00000552973 C6orf201Q7Z4U5 140 aa8.9□□□□□ -0.98
NEK3-204ENST00000552973 BPIFB6Q8NFQ5 453 aa8.9□□□□□ -0.98
NEK3-204ENST00000552973 OR2AK2Q8NG84 335 aa8.9□□□□□ -0.98
NEK3-204ENST00000552973 DLX4Q92988 240 aaPredicted RBP8.9□□□□□ -0.98
NEK3-204ENST00000552973 GALMQ96C23 342 aa8.9□□□□□ -0.98
NEK3-204ENST00000552973 NEDD4LQ96PU5 975 aa8.9□□□□□ -0.98
NEK3-204ENST00000552973 CLCC1Q96S66 551 aa8.9□□□□□ -0.98
NEK3-204ENST00000552973 CHCHD6Q9BRQ6 235 aa8.9□□□□□ -0.98
NEK3-204ENST00000552973 CST11Q9H112 138 aa8.9□□□□□ -0.98
NEK3-204ENST00000552973 IFI27L2Q9H2X8 130 aa8.9□□□□□ -0.98
NEK3-204ENST00000552973 FBXL15Q9H469 300 aa8.9□□□□□ -0.98
NEK3-204ENST00000552973 KIAA1456Q9P272 454 aa8.9□□□□□ -0.98
NEK3-204ENST00000552973 ZNF580Q9UK33 172 aa8.9□□□□□ -0.98
NEK3-204ENST00000552973 FCN1O00602 326 aa8.89□□□□□ -0.99
NEK3-204ENST00000552973 OVOL1O14753 267 aa8.89□□□□□ -0.99
NEK3-204ENST00000552973 SOX15O60248 233 aa8.89□□□□□ -0.99
NEK3-204ENST00000552973 SAP30O75446 220 aa8.89□□□□□ -0.99
NEK3-204ENST00000552973 RGS11O94810 467 aa8.89□□□□□ -0.99
NEK3-204ENST00000552973 GNAO1P09471 354 aa8.89□□□□□ -0.99
NEK3-204ENST00000552973 SNRPBP14678 240 aaKnown RBP8.89□□□□□ -0.99
NEK3-204ENST00000552973 CHATP28329 748 aa8.89□□□□□ -0.99
NEK3-204ENST00000552973 HTR2CP28335 458 aa8.89□□□□□ -0.99
NEK3-204ENST00000552973 WNT4P56705 351 aa8.89□□□□□ -0.99
NEK3-204ENST00000552973 GABPB1Q06547 395 aaPredicted RBP8.89□□□□□ -0.99
NEK3-204ENST00000552973 PLGLAQ15195 96 aa8.89□□□□□ -0.99
NEK3-204ENST00000552973 HMGN3Q15651 99 aa8.89□□□□□ -0.99
NEK3-204ENST00000552973 ACSM3Q53FZ2 586 aa8.89□□□□□ -0.99
NEK3-204ENST00000552973 C6orf141Q5SZD1 244 aa8.89□□□□□ -0.99
NEK3-204ENST00000552973 FAM131AQ6UXB0 335 aa8.89□□□□□ -0.99
NEK3-204ENST00000552973 SBSPONQ8IVN8 264 aa8.89□□□□□ -0.99
NEK3-204ENST00000552973 NANOGP1Q8N7R0 232 aa8.89□□□□□ -0.99
NEK3-204ENST00000552973 NKAIN3Q8N8D7 197 aa8.89□□□□□ -0.99
NEK3-204ENST00000552973 MINDY2Q8NBR6 621 aa8.89□□□□□ -0.99
NEK3-204ENST00000552973 NPBQ8NG41 125 aa8.89□□□□□ -0.99
NEK3-204ENST00000552973 ABHD5Q8WTS1 349 aa8.89□□□□□ -0.99
NEK3-204ENST00000552973 ABHD14BQ96IU4 210 aa8.89□□□□□ -0.99
NEK3-204ENST00000552973 UQCC2Q9BRT2 126 aa8.89□□□□□ -0.99
NEK3-204ENST00000552973 NICN1Q9BSH3 213 aa8.89□□□□□ -0.99
NEK3-204ENST00000552973 FAM103A1Q9BTL3 118 aaKnown RBP8.89□□□□□ -0.99
NEK3-204ENST00000552973 PARP12Q9H0J9 701 aaKnown RBP8.89□□□□□ -0.99
NEK3-204ENST00000552973 CHMP1AQ9HD42 196 aaPredicted RBP8.89□□□□□ -0.99
NEK3-204ENST00000552973 ISYNA1Q9NPH2 558 aa8.89□□□□□ -0.99
NEK3-204ENST00000552973 ABRACLQ9P1F3 81 aa8.89□□□□□ -0.99
NEK3-204ENST00000552973 GHRLQ9UBU3 117 aa8.89□□□□□ -0.99
NEK3-204ENST00000552973 PSORS1C1Q9UIG5 152 aa8.89□□□□□ -0.99
NEK3-204ENST00000552973 SMAD5-AS1Q9Y6J3 95 aa8.89□□□□□ -0.99
NEK3-204ENST00000552973 EBAG9O00559 213 aa8.88□□□□□ -0.99
NEK3-204ENST00000552973 NDUFA3O95167 84 aa8.88□□□□□ -0.99
NEK3-204ENST00000552973 IGHV3-11P01762 117 aa8.88□□□□□ -0.99
NEK3-204ENST00000552973 GSTP1P09211 210 aaKnown RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms