RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 CD3GP09693 182 aa12.32□□□□□ -0.44
PRPF40B-211ENST00000551063 PPP1CCP36873 323 aaKnown RBP12.32□□□□□ -0.44
PRPF40B-211ENST00000551063 REG1BP48304 166 aa12.32□□□□□ -0.44
PRPF40B-211ENST00000551063 KRTAP10-3P60369 221 aa12.32□□□□□ -0.44
PRPF40B-211ENST00000551063 MXD1Q05195 221 aa12.32□□□□□ -0.44
PRPF40B-211ENST00000551063 FBLN7Q53RD9 439 aa12.32□□□□□ -0.44
PRPF40B-211ENST00000551063 TGIF2LXQ8IUE1 241 aa12.32□□□□□ -0.44
PRPF40B-211ENST00000551063 OR2AK2Q8NG84 335 aa12.32□□□□□ -0.44
PRPF40B-211ENST00000551063 RTN4IP1Q8WWV3 396 aaPredicted RBP12.32□□□□□ -0.44
PRPF40B-211ENST00000551063 RNF167Q9H6Y7 350 aa12.32□□□□□ -0.44
PRPF40B-211ENST00000551063 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.32□□□□□ -0.44
PRPF40B-211ENST00000551063 SERTAD4Q9NUC0 356 aa12.32□□□□□ -0.44
PRPF40B-211ENST00000551063 KCNK7Q9Y2U2 307 aa12.32□□□□□ -0.44
PRPF40B-211ENST00000551063 MOB4Q9Y3A3 225 aa12.32□□□□□ -0.44
PRPF40B-211ENST00000551063 ITGB1BP1O14713 200 aa12.31□□□□□ -0.44
PRPF40B-211ENST00000551063 LANCL1O43813 399 aa12.31□□□□□ -0.44
PRPF40B-211ENST00000551063 AIREO43918 545 aa12.31□□□□□ -0.44
PRPF40B-211ENST00000551063 CLEC2LP0C7M8 214 aa12.31□□□□□ -0.44
PRPF40B-211ENST00000551063 BLCAPP62952 87 aa12.31□□□□□ -0.44
PRPF40B-211ENST00000551063 SRSF4Q08170 494 aaKnown RBP12.31□□□□□ -0.44
PRPF40B-211ENST00000551063 EBI3Q14213 229 aa12.31□□□□□ -0.44
PRPF40B-211ENST00000551063 HES1Q14469 280 aa12.31□□□□□ -0.44
PRPF40B-211ENST00000551063 C5orf24Q7Z6I8 188 aa12.31□□□□□ -0.44
PRPF40B-211ENST00000551063 MOB3BQ86TA1 216 aa12.31□□□□□ -0.44
PRPF40B-211ENST00000551063 LYG1Q8N1E2 194 aa12.31□□□□□ -0.44
PRPF40B-211ENST00000551063 KLHDC1Q8N7A1 406 aa12.31□□□□□ -0.44
PRPF40B-211ENST00000551063 LGALS14Q8TCE9 139 aa12.31□□□□□ -0.44
PRPF40B-211ENST00000551063 IL1F10Q8WWZ1 152 aa12.31□□□□□ -0.44
PRPF40B-211ENST00000551063 ATG5Q9H1Y0 275 aa12.31□□□□□ -0.44
PRPF40B-211ENST00000551063 ETV7Q9Y603 341 aa12.31□□□□□ -0.44
PRPF40B-211ENST00000551063 FGF16O43320 207 aa12.3□□□□□ -0.44
PRPF40B-211ENST00000551063 IGKV1D-33P01593 117 aa12.3□□□□□ -0.44
PRPF40B-211ENST00000551063 IGKV1-33P01594 117 aa12.3□□□□□ -0.44
PRPF40B-211ENST00000551063 SNRPBP14678 240 aaKnown RBP12.3□□□□□ -0.44
PRPF40B-211ENST00000551063 GNB3P16520 340 aa12.3□□□□□ -0.44
PRPF40B-211ENST00000551063 TMEM11P17152 192 aa12.3□□□□□ -0.44
PRPF40B-211ENST00000551063 CD1BP29016 333 aa12.3□□□□□ -0.44
PRPF40B-211ENST00000551063 VDAC2P45880 294 aaPredicted RBP12.3□□□□□ -0.44
PRPF40B-211ENST00000551063 KIR2DS1Q14954 304 aa12.3□□□□□ -0.44
PRPF40B-211ENST00000551063 HERPUD1Q15011 391 aa12.3□□□□□ -0.44
PRPF40B-211ENST00000551063 FAM71F2Q6NXP2 309 aa12.3□□□□□ -0.44
PRPF40B-211ENST00000551063 CROCCP3Q8IVE0 287 aa12.3□□□□□ -0.44
PRPF40B-211ENST00000551063 IFI27L2Q9H2X8 130 aa12.3□□□□□ -0.44
PRPF40B-211ENST00000551063 RHBDL2Q9NX52 303 aa12.3□□□□□ -0.44
PRPF40B-211ENST00000551063 TRDCB7Z8K6 153 aa12.29□□□□□ -0.44
PRPF40B-211ENST00000551063 DIRAS3O95661 229 aa12.29□□□□□ -0.44
PRPF40B-211ENST00000551063 AMY1AP04745 511 aa12.29□□□□□ -0.44
PRPF40B-211ENST00000551063 AMY2AP04746 511 aa12.29□□□□□ -0.44
PRPF40B-211ENST00000551063 FCGR3AP08637 254 aa12.29□□□□□ -0.44
PRPF40B-211ENST00000551063 SMIM18P0DKX4 95 aa12.29□□□□□ -0.44
PRPF40B-211ENST00000551063 ZBTB25P24278 435 aa12.29□□□□□ -0.44
PRPF40B-211ENST00000551063 ARSJQ5FYB0 599 aaPredicted RBP12.29□□□□□ -0.44
PRPF40B-211ENST00000551063 TREML4Q6UXN2 200 aa12.29□□□□□ -0.44
PRPF40B-211ENST00000551063 OR4A4PQ8NGN8 299 aa12.29□□□□□ -0.44
PRPF40B-211ENST00000551063 OR2T10Q8NGZ9 312 aa12.29□□□□□ -0.44
PRPF40B-211ENST00000551063 EDARADDQ8WWZ3 215 aa12.29□□□□□ -0.44
PRPF40B-211ENST00000551063 WNT10AQ9GZT5 417 aa12.29□□□□□ -0.44
PRPF40B-211ENST00000551063 GHITMQ9H3K2 345 aa12.29□□□□□ -0.44
PRPF40B-211ENST00000551063 PIPOXQ9P0Z9 390 aa12.29□□□□□ -0.44
PRPF40B-211ENST00000551063 SLC23A1Q9UHI7 598 aa12.29□□□□□ -0.44
PRPF40B-211ENST00000551063 A0A075B6Q4 140 aa12.28□□□□□ -0.44
PRPF40B-211ENST00000551063 IGHV3-72A0A0B4J1Y9 119 aa12.28□□□□□ -0.44
PRPF40B-211ENST00000551063 M0QZ24 198 aa12.28□□□□□ -0.44
PRPF40B-211ENST00000551063 FABP7O15540 132 aa12.28□□□□□ -0.44
PRPF40B-211ENST00000551063 HSPA12AO43301 675 aa12.28□□□□□ -0.44
PRPF40B-211ENST00000551063 PEX14O75381 377 aa12.28□□□□□ -0.44
PRPF40B-211ENST00000551063 SCTP09683 121 aa12.28□□□□□ -0.44
PRPF40B-211ENST00000551063 DTYMKP23919 212 aa12.28□□□□□ -0.44
PRPF40B-211ENST00000551063 SERPINB10P48595 397 aa12.28□□□□□ -0.44
PRPF40B-211ENST00000551063 ARFRP1Q13795 201 aa12.28□□□□□ -0.44
PRPF40B-211ENST00000551063 SRSF7Q16629 238 aaKnown RBP eCLIP12.28□□□□□ -0.44
PRPF40B-211ENST00000551063 ABCA11PQ4W5N1 156 aa12.28□□□□□ -0.44
PRPF40B-211ENST00000551063 IDNKQ5T6J7 187 aa12.28□□□□□ -0.44
PRPF40B-211ENST00000551063 Q6ZS46 218 aa12.28□□□□□ -0.44
PRPF40B-211ENST00000551063 Q6ZS49 121 aa12.28□□□□□ -0.44
PRPF40B-211ENST00000551063 ZNF833PQ6ZTB9 187 aa12.28□□□□□ -0.44
PRPF40B-211ENST00000551063 ODF3L1Q8IXM7 274 aa12.28□□□□□ -0.44
PRPF40B-211ENST00000551063 Q8N6K4 173 aa12.28□□□□□ -0.44
PRPF40B-211ENST00000551063 OR13F1Q8NGS4 319 aa12.28□□□□□ -0.44
PRPF40B-211ENST00000551063 WIPF2Q8TF74 440 aaPredicted RBP12.28□□□□□ -0.44
PRPF40B-211ENST00000551063 EAF1Q96JC9 268 aaPredicted RBP12.28□□□□□ -0.44
PRPF40B-211ENST00000551063 CABLES2Q9BTV7 478 aa12.28□□□□□ -0.44
PRPF40B-211ENST00000551063 OR1A1Q9P1Q5 309 aa12.28□□□□□ -0.44
PRPF40B-211ENST00000551063 CMYA5Q8N3K9 4069 aa12.27□□□□□ -0.45
PRPF40B-211ENST00000551063 SAA2-SAA4A0A096LPE2 208 aa12.27□□□□□ -0.45
PRPF40B-211ENST00000551063 A0A0A6YYH2 397 aa12.27□□□□□ -0.45
PRPF40B-211ENST00000551063 IGKV1-6A0A0C4DH72 117 aa12.27□□□□□ -0.45
PRPF40B-211ENST00000551063 A6NJ64 397 aa12.27□□□□□ -0.45
PRPF40B-211ENST00000551063 RAB29O14966 203 aa12.27□□□□□ -0.45
PRPF40B-211ENST00000551063 ST8SIA5O15466 376 aa12.27□□□□□ -0.45
PRPF40B-211ENST00000551063 GSTP1P09211 210 aaKnown RBP12.27□□□□□ -0.45
PRPF40B-211ENST00000551063 SAA2P0DJI9 122 aaPredicted RBP12.27□□□□□ -0.45
PRPF40B-211ENST00000551063 VSIG10L2P0DP72 767 aa12.27□□□□□ -0.45
PRPF40B-211ENST00000551063 TALDO1P37837 337 aa12.27□□□□□ -0.45
PRPF40B-211ENST00000551063 LSAMPQ13449 338 aa12.27□□□□□ -0.45
PRPF40B-211ENST00000551063 TMEM95Q3KNT9 176 aa12.27□□□□□ -0.45
PRPF40B-211ENST00000551063 C5orf56Q8N8D9 126 aa12.27□□□□□ -0.45
PRPF40B-211ENST00000551063 OR8H1Q8NGG4 311 aa12.27□□□□□ -0.45
PRPF40B-211ENST00000551063 FUNDC2Q9BWH2 189 aa12.27□□□□□ -0.45
PRPF40B-211ENST00000551063 TOLLIPQ9H0E2 274 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms