RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 CST11Q9H112 138 aa7.58□□□□□ -1.2
TRAFD1-207ENST00000550051 ALX4Q9H161 411 aaPredicted RBP7.58□□□□□ -1.2
TRAFD1-207ENST00000550051 OR2S2Q9NQN1 319 aa7.58□□□□□ -1.2
TRAFD1-207ENST00000550051 PARP11Q9NR21 331 aa7.58□□□□□ -1.2
TRAFD1-207ENST00000550051 MBNL3Q9NUK0 354 aaKnown RBP7.58□□□□□ -1.2
TRAFD1-207ENST00000550051 IGHV4OR15-8A0A075B7B6 117 aa7.57□□□□□ -1.2
TRAFD1-207ENST00000550051 A0A087WW49 117 aa7.57□□□□□ -1.2
TRAFD1-207ENST00000550051 A0A1W2PP11 408 aa7.57□□□□□ -1.2
TRAFD1-207ENST00000550051 HSPA12AO43301 675 aa7.57□□□□□ -1.2
TRAFD1-207ENST00000550051 YPEL1O60688 119 aa7.57□□□□□ -1.2
TRAFD1-207ENST00000550051 SC5DO75845 299 aa7.57□□□□□ -1.2
TRAFD1-207ENST00000550051 IGLV1-51P01701 117 aa7.57□□□□□ -1.2
TRAFD1-207ENST00000550051 EGR2P11161 476 aaPredicted RBP7.57□□□□□ -1.2
TRAFD1-207ENST00000550051 IGFBP3P17936 291 aaPredicted RBP7.57□□□□□ -1.2
TRAFD1-207ENST00000550051 CNTFRP26992 372 aa7.57□□□□□ -1.2
TRAFD1-207ENST00000550051 PPP3R1P63098 170 aa7.57□□□□□ -1.2
TRAFD1-207ENST00000550051 ADARB1P78563 741 aaKnown RBP7.57□□□□□ -1.2
TRAFD1-207ENST00000550051 HTD2P86397 168 aa7.57□□□□□ -1.2
TRAFD1-207ENST00000550051 TMEM267Q0VDI3 215 aaPredicted RBP7.57□□□□□ -1.2
TRAFD1-207ENST00000550051 SLC22A6Q4U2R8 563 aa7.57□□□□□ -1.2
TRAFD1-207ENST00000550051 AKIRIN2Q53H80 203 aa7.57□□□□□ -1.2
TRAFD1-207ENST00000550051 DDI2Q5TDH0 399 aa7.57□□□□□ -1.2
TRAFD1-207ENST00000550051 PYHIN1Q6K0P9 492 aa7.57□□□□□ -1.2
TRAFD1-207ENST00000550051 RPL22L1Q6P5R6 122 aaKnown RBP7.57□□□□□ -1.2
TRAFD1-207ENST00000550051 ZNF833PQ6ZTB9 187 aa7.57□□□□□ -1.2
TRAFD1-207ENST00000550051 OR10V1Q8NGI7 309 aa7.57□□□□□ -1.2
TRAFD1-207ENST00000550051 OR4K15Q8NH41 348 aa7.57□□□□□ -1.2
TRAFD1-207ENST00000550051 ARPC1AQ92747 370 aa7.57□□□□□ -1.2
TRAFD1-207ENST00000550051 TMEM106AQ96A25 262 aa7.57□□□□□ -1.2
TRAFD1-207ENST00000550051 RHOVQ96L33 236 aa7.57□□□□□ -1.2
TRAFD1-207ENST00000550051 Q96MT0 163 aa7.57□□□□□ -1.2
TRAFD1-207ENST00000550051 YPEL2Q96QA6 119 aa7.57□□□□□ -1.2
TRAFD1-207ENST00000550051 TAF9BQ9HBM6 251 aa7.57□□□□□ -1.2
TRAFD1-207ENST00000550051 ETAA1Q9NY74 926 aa7.57□□□□□ -1.2
TRAFD1-207ENST00000550051 AASSQ9UDR5 926 aa7.57□□□□□ -1.2
TRAFD1-207ENST00000550051 FOXA2Q9Y261 457 aaPredicted RBP7.57□□□□□ -1.2
TRAFD1-207ENST00000550051 LRRC42Q9Y546 428 aa7.57□□□□□ -1.2
TRAFD1-207ENST00000550051 ORC6Q9Y5N6 252 aa7.57□□□□□ -1.2
TRAFD1-207ENST00000550051 TMEM238LA0A1B0GVL6 79 aa7.56□□□□□ -1.2
TRAFD1-207ENST00000550051 A0A1W2PN81 502 aa7.56□□□□□ -1.2
TRAFD1-207ENST00000550051 FAM90A7PA6NKC0 464 aa7.56□□□□□ -1.2
TRAFD1-207ENST00000550051 SAC3D1A6NKF1 404 aa7.56□□□□□ -1.2
TRAFD1-207ENST00000550051 FAM90A23PA8MXZ1 464 aa7.56□□□□□ -1.2
TRAFD1-207ENST00000550051 OGG1O15527 345 aa7.56□□□□□ -1.2
TRAFD1-207ENST00000550051 LIMS3P0CW19 117 aa7.56□□□□□ -1.2
TRAFD1-207ENST00000550051 LIMS4P0CW20 117 aa7.56□□□□□ -1.2
TRAFD1-207ENST00000550051 LORP23490 312 aaPredicted RBP7.56□□□□□ -1.2
TRAFD1-207ENST00000550051 CHRNA7P36544 502 aa7.56□□□□□ -1.2
TRAFD1-207ENST00000550051 CX3CL1P78423 397 aa7.56□□□□□ -1.2
TRAFD1-207ENST00000550051 PITPNAQ00169 270 aa7.56□□□□□ -1.2
TRAFD1-207ENST00000550051 SRSF7Q16629 238 aaKnown RBP eCLIP7.56□□□□□ -1.2
TRAFD1-207ENST00000550051 ZIK1Q3SY52 487 aaPredicted RBP7.56□□□□□ -1.2
TRAFD1-207ENST00000550051 RAB12Q6IQ22 244 aa7.56□□□□□ -1.2
TRAFD1-207ENST00000550051 CDH26Q8IXH8 852 aa7.56□□□□□ -1.2
TRAFD1-207ENST00000550051 PRR18Q8N4B5 295 aa7.56□□□□□ -1.2
TRAFD1-207ENST00000550051 OR52I1Q8NGK6 324 aa7.56□□□□□ -1.2
TRAFD1-207ENST00000550051 ZNF184Q99676 751 aaPredicted RBP7.56□□□□□ -1.2
TRAFD1-207ENST00000550051 ABHD14AQ9BUJ0 271 aa7.56□□□□□ -1.2
TRAFD1-207ENST00000550051 ELOVL1Q9BW60 279 aa7.56□□□□□ -1.2
TRAFD1-207ENST00000550051 MRPL20Q9BYC9 149 aaKnown RBP7.56□□□□□ -1.2
TRAFD1-207ENST00000550051 KCNIP1Q9NZI2 227 aa7.56□□□□□ -1.2
TRAFD1-207ENST00000550051 KIAA1456Q9P272 454 aa7.56□□□□□ -1.2
TRAFD1-207ENST00000550051 JPT1Q9UK76 154 aa7.56□□□□□ -1.2
TRAFD1-207ENST00000550051 RNF150Q9ULK6 438 aa7.56□□□□□ -1.2
TRAFD1-207ENST00000550051 STUB1Q9UNE7 303 aa7.56□□□□□ -1.2
TRAFD1-207ENST00000550051 FBXO7Q9Y3I1 522 aa7.56□□□□□ -1.2
TRAFD1-207ENST00000550051 PEX16Q9Y5Y5 336 aa7.56□□□□□ -1.2
TRAFD1-207ENST00000550051 RRHO14718 337 aa7.55□□□□□ -1.2
TRAFD1-207ENST00000550051 RGS11O94810 467 aa7.55□□□□□ -1.2
TRAFD1-207ENST00000550051 FUT3P21217 361 aa7.55□□□□□ -1.2
TRAFD1-207ENST00000550051 RASSF2P50749 326 aa7.55□□□□□ -1.2
TRAFD1-207ENST00000550051 ALDH3A2P51648 485 aa7.55□□□□□ -1.2
TRAFD1-207ENST00000550051 NDPQ00604 133 aa7.55□□□□□ -1.2
TRAFD1-207ENST00000550051 RIPK1Q13546 671 aa7.55□□□□□ -1.2
TRAFD1-207ENST00000550051 C1orf146Q5VVC0 180 aa7.55□□□□□ -1.2
TRAFD1-207ENST00000550051 FAM71F2Q6NXP2 309 aa7.55□□□□□ -1.2
TRAFD1-207ENST00000550051 ZNF562Q6V9R5 426 aa7.55□□□□□ -1.2
TRAFD1-207ENST00000550051 ADAMTSL5Q6ZMM2 481 aa7.55□□□□□ -1.2
TRAFD1-207ENST00000550051 SGPP2Q8IWX5 399 aa7.55□□□□□ -1.2
TRAFD1-207ENST00000550051 OR52L2PQ8NGH6 319 aa7.55□□□□□ -1.2
TRAFD1-207ENST00000550051 RDH12Q96NR8 316 aa7.55□□□□□ -1.2
TRAFD1-207ENST00000550051 RNF5Q99942 180 aa7.55□□□□□ -1.2
TRAFD1-207ENST00000550051 SPATA25Q9BR10 227 aa7.55□□□□□ -1.2
TRAFD1-207ENST00000550051 SLA2Q9H6Q3 261 aa7.55□□□□□ -1.2
TRAFD1-207ENST00000550051 AMBNQ9NP70 447 aa7.55□□□□□ -1.2
TRAFD1-207ENST00000550051 FGF20Q9NP95 211 aaPredicted RBP7.55□□□□□ -1.2
TRAFD1-207ENST00000550051 RPL36Q9Y3U8 105 aaKnown RBP7.55□□□□□ -1.2
TRAFD1-207ENST00000550051 BIRC6Q9NR09 4857 aa7.54□□□□□ -1.2
TRAFD1-207ENST00000550051 TRBV5-5A0A0J9YX44 114 aa7.54□□□□□ -1.2
TRAFD1-207ENST00000550051 FCN1O00602 326 aa7.54□□□□□ -1.2
TRAFD1-207ENST00000550051 EI24O14681 340 aa7.54□□□□□ -1.2
TRAFD1-207ENST00000550051 IFNA6P05013 189 aa7.54□□□□□ -1.2
TRAFD1-207ENST00000550051 CD40LGP29965 261 aa7.54□□□□□ -1.2
TRAFD1-207ENST00000550051 MC5RP33032 325 aa7.54□□□□□ -1.2
TRAFD1-207ENST00000550051 PPP1CCP36873 323 aaKnown RBP7.54□□□□□ -1.2
TRAFD1-207ENST00000550051 OR3A3P47888 321 aa7.54□□□□□ -1.2
TRAFD1-207ENST00000550051 GNMTQ14749 295 aa7.54□□□□□ -1.2
TRAFD1-207ENST00000550051 HAGHQ16775 308 aa7.54□□□□□ -1.2
TRAFD1-207ENST00000550051 LRRC36Q1X8D7 754 aa7.54□□□□□ -1.2
TRAFD1-207ENST00000550051 ACTBL2Q562R1 376 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms