RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 NOTCH3Q9UM47 2321 aa7.75□□□□□ -1.17
HDAC7-229ENST00000549883 IGKV1-6A0A0C4DH72 117 aa7.74□□□□□ -1.17
HDAC7-229ENST00000549883 ST8SIA5O15466 376 aa7.74□□□□□ -1.17
HDAC7-229ENST00000549883 YPEL1O60688 119 aa7.74□□□□□ -1.17
HDAC7-229ENST00000549883 PEX14O75381 377 aa7.74□□□□□ -1.17
HDAC7-229ENST00000549883 CD3GP09693 182 aa7.74□□□□□ -1.17
HDAC7-229ENST00000549883 CLEC2LP0C7M8 214 aa7.74□□□□□ -1.17
HDAC7-229ENST00000549883 RAB3BP20337 219 aa7.74□□□□□ -1.17
HDAC7-229ENST00000549883 CNTFRP26992 372 aa7.74□□□□□ -1.17
HDAC7-229ENST00000549883 HTD2P86397 168 aa7.74□□□□□ -1.17
HDAC7-229ENST00000549883 CD83Q01151 205 aa7.74□□□□□ -1.17
HDAC7-229ENST00000549883 NEDD8Q15843 81 aa7.74□□□□□ -1.17
HDAC7-229ENST00000549883 Q3ZCU0 254 aa7.74□□□□□ -1.17
HDAC7-229ENST00000549883 TRAT1Q6PIZ9 186 aa7.74□□□□□ -1.17
HDAC7-229ENST00000549883 C18orf65Q6ZTR6 163 aa7.74□□□□□ -1.17
HDAC7-229ENST00000549883 CENPVQ7Z7K6 275 aaPredicted RBP7.74□□□□□ -1.17
HDAC7-229ENST00000549883 ZNF329Q86UD4 541 aa7.74□□□□□ -1.17
HDAC7-229ENST00000549883 TGIF2LXQ8IUE1 241 aa7.74□□□□□ -1.17
HDAC7-229ENST00000549883 IZUMO1Q8IYV9 350 aa7.74□□□□□ -1.17
HDAC7-229ENST00000549883 Q8N9W7 124 aa7.74□□□□□ -1.17
HDAC7-229ENST00000549883 GALMQ96C23 342 aa7.74□□□□□ -1.17
HDAC7-229ENST00000549883 ABHD14BQ96IU4 210 aa7.74□□□□□ -1.17
HDAC7-229ENST00000549883 YPEL2Q96QA6 119 aa7.74□□□□□ -1.17
HDAC7-229ENST00000549883 URM1Q9BTM9 101 aaKnown RBP7.74□□□□□ -1.17
HDAC7-229ENST00000549883 ABHD14AQ9BUJ0 271 aa7.74□□□□□ -1.17
HDAC7-229ENST00000549883 MRPL20Q9BYC9 149 aaKnown RBP7.74□□□□□ -1.17
HDAC7-229ENST00000549883 YTHDF1Q9BYJ9 559 aaKnown RBP7.74□□□□□ -1.17
HDAC7-229ENST00000549883 IFI27L2Q9H2X8 130 aa7.74□□□□□ -1.17
HDAC7-229ENST00000549883 Q9N2K0 584 aa7.74□□□□□ -1.17
HDAC7-229ENST00000549883 JPT1Q9UK76 154 aa7.74□□□□□ -1.17
HDAC7-229ENST00000549883 HSF4Q9ULV5 492 aa7.74□□□□□ -1.17
HDAC7-229ENST00000549883 NOTCH1P46531 2555 aa7.74□□□□□ -1.17
HDAC7-229ENST00000549883 CMYA5Q8N3K9 4069 aa7.73□□□□□ -1.17
HDAC7-229ENST00000549883 A0A075B6Q4 140 aa7.73□□□□□ -1.17
HDAC7-229ENST00000549883 SAA2-SAA4A0A096LPE2 208 aa7.73□□□□□ -1.17
HDAC7-229ENST00000549883 TRBV6-6A0A0A6YYG2 114 aa7.73□□□□□ -1.17
HDAC7-229ENST00000549883 NCBP2LA6PVI3 153 aaKnown RBP7.73□□□□□ -1.17
HDAC7-229ENST00000549883 RAB27BO00194 218 aa7.73□□□□□ -1.17
HDAC7-229ENST00000549883 LANCL1O43813 399 aa7.73□□□□□ -1.17
HDAC7-229ENST00000549883 SAA2P0DJI9 122 aaPredicted RBP7.73□□□□□ -1.17
HDAC7-229ENST00000549883 GNB3P16520 340 aa7.73□□□□□ -1.17
HDAC7-229ENST00000549883 GADD45AP24522 165 aa7.73□□□□□ -1.17
HDAC7-229ENST00000549883 MYL9P24844 172 aa7.73□□□□□ -1.17
HDAC7-229ENST00000549883 CD1BP29016 333 aa7.73□□□□□ -1.17
HDAC7-229ENST00000549883 TGFBR1P36897 503 aa7.73□□□□□ -1.17
HDAC7-229ENST00000549883 LINC00205P59089 165 aa7.73□□□□□ -1.17
HDAC7-229ENST00000549883 LSAMPQ13449 338 aa7.73□□□□□ -1.17
HDAC7-229ENST00000549883 RPL39P5Q59GN2 51 aa7.73□□□□□ -1.17
HDAC7-229ENST00000549883 ZNF554Q86TJ5 538 aa7.73□□□□□ -1.17
HDAC7-229ENST00000549883 OR2T10Q8NGZ9 312 aa7.73□□□□□ -1.17
HDAC7-229ENST00000549883 MAFIPQ8WZ33 124 aa7.73□□□□□ -1.17
HDAC7-229ENST00000549883 AKR1E2Q96JD6 320 aa7.73□□□□□ -1.17
HDAC7-229ENST00000549883 NABP2Q9BQ15 211 aa7.73□□□□□ -1.17
HDAC7-229ENST00000549883 CMSS1Q9BQ75 279 aaKnown RBP7.73□□□□□ -1.17
HDAC7-229ENST00000549883 HSPB9Q9BQS6 159 aa7.73□□□□□ -1.17
HDAC7-229ENST00000549883 ZNF251Q9BRH9 671 aa7.73□□□□□ -1.17
HDAC7-229ENST00000549883 RAB22AQ9UL26 194 aa7.73□□□□□ -1.17
HDAC7-229ENST00000549883 RNF150Q9ULK6 438 aa7.73□□□□□ -1.17
HDAC7-229ENST00000549883 STUB1Q9UNE7 303 aa7.73□□□□□ -1.17
HDAC7-229ENST00000549883 MEGF8Q7Z7M0 2845 aa7.72□□□□□ -1.17
HDAC7-229ENST00000549883 IGKV1D-8A0A087WSZ0 117 aa7.72□□□□□ -1.17
HDAC7-229ENST00000549883 G3V4G9 280 aa7.72□□□□□ -1.17
HDAC7-229ENST00000549883 H3BUI4 141 aa7.72□□□□□ -1.17
HDAC7-229ENST00000549883 M0QZK8 103 aa7.72□□□□□ -1.17
HDAC7-229ENST00000549883 MFNGO00587 321 aa7.72□□□□□ -1.17
HDAC7-229ENST00000549883 PDCD5O14737 125 aa7.72□□□□□ -1.17
HDAC7-229ENST00000549883 PROP1O75360 226 aa7.72□□□□□ -1.17
HDAC7-229ENST00000549883 OPN1MWP04001 364 aa7.72□□□□□ -1.17
HDAC7-229ENST00000549883 OPN1MW2P0DN77 364 aa7.72□□□□□ -1.17
HDAC7-229ENST00000549883 OPN1MW3P0DN78 364 aa7.72□□□□□ -1.17
HDAC7-229ENST00000549883 IL3RAP26951 378 aa7.72□□□□□ -1.17
HDAC7-229ENST00000549883 FGF9P31371 208 aaPredicted RBP7.72□□□□□ -1.17
HDAC7-229ENST00000549883 SDC2P34741 201 aa7.72□□□□□ -1.17
HDAC7-229ENST00000549883 CEACAM6P40199 344 aa7.72□□□□□ -1.17
HDAC7-229ENST00000549883 HLA-DRB3P79483 266 aa7.72□□□□□ -1.17
HDAC7-229ENST00000549883 MXD1Q05195 221 aa7.72□□□□□ -1.17
HDAC7-229ENST00000549883 TMEM30BQ3MIR4 351 aa7.72□□□□□ -1.17
HDAC7-229ENST00000549883 STEAP3Q658P3 488 aa7.72□□□□□ -1.17
HDAC7-229ENST00000549883 GLDNQ6ZMI3 551 aaPredicted RBP7.72□□□□□ -1.17
HDAC7-229ENST00000549883 LCNL1Q6ZST4 164 aa7.72□□□□□ -1.17
HDAC7-229ENST00000549883 ZNF833PQ6ZTB9 187 aa7.72□□□□□ -1.17
HDAC7-229ENST00000549883 NDUFA11Q86Y39 141 aa7.72□□□□□ -1.17
HDAC7-229ENST00000549883 OR56B1Q8NGI3 324 aa7.72□□□□□ -1.17
HDAC7-229ENST00000549883 FCGR1BQ92637 280 aa7.72□□□□□ -1.17
HDAC7-229ENST00000549883 R3HDM4Q96D70 268 aa7.72□□□□□ -1.17
HDAC7-229ENST00000549883 RAB3CQ96E17 227 aa7.72□□□□□ -1.17
HDAC7-229ENST00000549883 S1PR3Q99500 378 aa7.72□□□□□ -1.17
HDAC7-229ENST00000549883 CHCHD6Q9BRQ6 235 aa7.72□□□□□ -1.17
HDAC7-229ENST00000549883 AGMATQ9BSE5 352 aa7.72□□□□□ -1.17
HDAC7-229ENST00000549883 CENPOQ9BU64 300 aa7.72□□□□□ -1.17
HDAC7-229ENST00000549883 C11orf54Q9H0W9 315 aaPredicted RBP7.72□□□□□ -1.17
HDAC7-229ENST00000549883 RAB9BQ9NP90 201 aa7.72□□□□□ -1.17
HDAC7-229ENST00000549883 C12orf4Q9NQ89 552 aa7.72□□□□□ -1.17
HDAC7-229ENST00000549883 ABRACLQ9P1F3 81 aa7.72□□□□□ -1.17
HDAC7-229ENST00000549883 SLC23A1Q9UHI7 598 aa7.72□□□□□ -1.17
HDAC7-229ENST00000549883 ZNF230Q9UIE0 474 aaPredicted RBP7.72□□□□□ -1.17
HDAC7-229ENST00000549883 LOC100506127A0A0U1RQW1 187 aa7.71□□□□□ -1.18
HDAC7-229ENST00000549883 TCRBV4S1A1TA0A5B7 111 aa7.71□□□□□ -1.18
HDAC7-229ENST00000549883 SERPINE3A8MV23 424 aa7.71□□□□□ -1.18
HDAC7-229ENST00000549883 FGF16O43320 207 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms