RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 PDZD2O15018 2839 aa12.98□□□□□ -0.33
TRAFD1-203ENST00000547063 J3QLI3 93 aa12.97□□□□□ -0.33
TRAFD1-203ENST00000547063 TCRBP04435 133 aa12.97□□□□□ -0.33
TRAFD1-203ENST00000547063 PGAM2P15259 253 aa12.97□□□□□ -0.33
TRAFD1-203ENST00000547063 S100GP29377 79 aa12.97□□□□□ -0.33
TRAFD1-203ENST00000547063 CCR6P51684 374 aa12.97□□□□□ -0.33
TRAFD1-203ENST00000547063 FXYD4P59646 89 aa12.97□□□□□ -0.33
TRAFD1-203ENST00000547063 PAX8Q06710 450 aa12.97□□□□□ -0.33
TRAFD1-203ENST00000547063 AADACL3Q5VUY0 350 aa12.97□□□□□ -0.33
TRAFD1-203ENST00000547063 CYB5R2Q6BCY4 276 aa12.97□□□□□ -0.33
TRAFD1-203ENST00000547063 SLC38A6Q8IZM9 456 aa12.97□□□□□ -0.33
TRAFD1-203ENST00000547063 ABHD12Q8N2K0 398 aa12.97□□□□□ -0.33
TRAFD1-203ENST00000547063 Q8N7P7 452 aa12.97□□□□□ -0.33
TRAFD1-203ENST00000547063 OR9G1Q8NH87 305 aa12.97□□□□□ -0.33
TRAFD1-203ENST00000547063 ZNF486Q96H40 463 aaPredicted RBP12.97□□□□□ -0.33
TRAFD1-203ENST00000547063 ABHD14AQ9BUJ0 271 aa12.97□□□□□ -0.33
TRAFD1-203ENST00000547063 SUCNR1Q9BXA5 334 aa12.97□□□□□ -0.33
TRAFD1-203ENST00000547063 CLEC7AQ9BXN2 247 aa12.97□□□□□ -0.33
TRAFD1-203ENST00000547063 SIRPDQ9H106 197 aa12.97□□□□□ -0.33
TRAFD1-203ENST00000547063 HIF1ANQ9NWT6 349 aa12.97□□□□□ -0.33
TRAFD1-203ENST00000547063 NUBP2Q9Y5Y2 271 aa12.97□□□□□ -0.33
TRAFD1-203ENST00000547063 MED13LQ71F56 2210 aa12.96□□□□□ -0.33
TRAFD1-203ENST00000547063 CREBBPQ92793 2442 aa12.96□□□□□ -0.33
TRAFD1-203ENST00000547063 OR5H14A6NHG9 310 aa12.96□□□□□ -0.33
TRAFD1-203ENST00000547063 TOR1AO14656 332 aa12.96□□□□□ -0.33
TRAFD1-203ENST00000547063 TGFAP01135 160 aa12.96□□□□□ -0.33
TRAFD1-203ENST00000547063 OR8U9P0C7N5 309 aa12.96□□□□□ -0.33
TRAFD1-203ENST00000547063 IGHV4-31P0DP07 118 aa12.96□□□□□ -0.33
TRAFD1-203ENST00000547063 MSMO1Q15800 293 aa12.96□□□□□ -0.33
TRAFD1-203ENST00000547063 SLC25A48Q6ZT89 311 aaKnown RBP12.96□□□□□ -0.33
TRAFD1-203ENST00000547063 VMO1Q7Z5L0 202 aa12.96□□□□□ -0.33
TRAFD1-203ENST00000547063 LINC00311Q8N616 119 aa12.96□□□□□ -0.33
TRAFD1-203ENST00000547063 OR13C8Q8NGS7 320 aa12.96□□□□□ -0.33
TRAFD1-203ENST00000547063 OR8U1Q8NH10 309 aa12.96□□□□□ -0.33
TRAFD1-203ENST00000547063 ZNF596Q8TC21 504 aa12.96□□□□□ -0.33
TRAFD1-203ENST00000547063 SECTM1Q8WVN6 248 aa12.96□□□□□ -0.33
TRAFD1-203ENST00000547063 TOMM40LQ969M1 308 aa12.96□□□□□ -0.33
TRAFD1-203ENST00000547063 CREB3L1Q96BA8 519 aa12.96□□□□□ -0.33
TRAFD1-203ENST00000547063 MSI2Q96DH6 328 aaKnown RBP12.96□□□□□ -0.33
TRAFD1-203ENST00000547063 SLC5A7Q9GZV3 580 aa12.96□□□□□ -0.33
TRAFD1-203ENST00000547063 OCEL1Q9H607 264 aa12.96□□□□□ -0.33
TRAFD1-203ENST00000547063 ZNF221Q9UK13 617 aa12.96□□□□□ -0.33
TRAFD1-203ENST00000547063 PSG11Q9UQ72 335 aa12.96□□□□□ -0.33
TRAFD1-203ENST00000547063 C14orf166Q9Y224 244 aaKnown RBP12.96□□□□□ -0.33
TRAFD1-203ENST00000547063 ARHGAP32A7KAX9 2087 aa12.96□□□□□ -0.33
TRAFD1-203ENST00000547063 CR1P17927 2039 aa12.95□□□□□ -0.34
TRAFD1-203ENST00000547063 IGHV2-26A0A0B4J1V2 119 aa12.95□□□□□ -0.34
TRAFD1-203ENST00000547063 J3QR06 171 aa12.95□□□□□ -0.34
TRAFD1-203ENST00000547063 MMP9P14780 707 aa12.95□□□□□ -0.34
TRAFD1-203ENST00000547063 IL3RAP26951 378 aa12.95□□□□□ -0.34
TRAFD1-203ENST00000547063 CMTM1Q8IZ96 169 aa12.95□□□□□ -0.34
TRAFD1-203ENST00000547063 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.95□□□□□ -0.34
TRAFD1-203ENST00000547063 ZBTB34Q8NCN2 500 aa12.95□□□□□ -0.34
TRAFD1-203ENST00000547063 ZNF439Q8NDP4 499 aa12.95□□□□□ -0.34
TRAFD1-203ENST00000547063 BEND2Q8NDZ0 799 aa12.95□□□□□ -0.34
TRAFD1-203ENST00000547063 MARCH1Q8TCQ1 289 aa12.95□□□□□ -0.34
TRAFD1-203ENST00000547063 CHPT1Q8WUD6 406 aa12.95□□□□□ -0.34
TRAFD1-203ENST00000547063 AKR1E2Q96JD6 320 aa12.95□□□□□ -0.34
TRAFD1-203ENST00000547063 PCGF1Q9BSM1 259 aa12.95□□□□□ -0.34
TRAFD1-203ENST00000547063 FXYD6Q9H0Q3 95 aa12.95□□□□□ -0.34
TRAFD1-203ENST00000547063 NUDT15Q9NV35 164 aa12.95□□□□□ -0.34
TRAFD1-203ENST00000547063 PIPOXQ9P0Z9 390 aa12.95□□□□□ -0.34
TRAFD1-203ENST00000547063 AMMECR1Q9Y4X0 333 aaPredicted RBP12.95□□□□□ -0.34
TRAFD1-203ENST00000547063 AUP1Q9Y679 476 aa12.95□□□□□ -0.34
TRAFD1-203ENST00000547063 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.95□□□□□ -0.341e-6■■■■□ 24.3
TRAFD1-203ENST00000547063 WNK2Q9Y3S1 2297 aa12.95□□□□□ -0.34
TRAFD1-203ENST00000547063 ABCA2Q9BZC7 2435 aa12.94□□□□□ -0.34
TRAFD1-203ENST00000547063 RLN1P04808 185 aa12.94□□□□□ -0.34
TRAFD1-203ENST00000547063 CTSDP07339 412 aaPredicted RBP12.94□□□□□ -0.34
TRAFD1-203ENST00000547063 GNG10P50151 68 aa12.94□□□□□ -0.34
TRAFD1-203ENST00000547063 RAG2P55895 527 aa12.94□□□□□ -0.34
TRAFD1-203ENST00000547063 TAS2R31P59538 309 aa12.94□□□□□ -0.34
TRAFD1-203ENST00000547063 OXA1LQ15070 435 aa12.94□□□□□ -0.34
TRAFD1-203ENST00000547063 ABCA11PQ4W5N1 156 aa12.94□□□□□ -0.34
TRAFD1-203ENST00000547063 CT45A1Q5HYN5 189 aa12.94□□□□□ -0.34
TRAFD1-203ENST00000547063 C11orf88Q6PI97 169 aa12.94□□□□□ -0.34
TRAFD1-203ENST00000547063 CCBE1Q6UXH8 406 aaPredicted RBP12.94□□□□□ -0.34
TRAFD1-203ENST00000547063 ZNF645Q8N7E2 425 aa12.94□□□□□ -0.34
TRAFD1-203ENST00000547063 CCDC71LQ8N9Z2 235 aa12.94□□□□□ -0.34
TRAFD1-203ENST00000547063 MAPK1IP1LQ8NDC0 245 aa12.94□□□□□ -0.34
TRAFD1-203ENST00000547063 OR11H6Q8NGC7 330 aa12.94□□□□□ -0.34
TRAFD1-203ENST00000547063 CT45A3Q8NHU0 189 aa12.94□□□□□ -0.34
TRAFD1-203ENST00000547063 AGMATQ9BSE5 352 aa12.94□□□□□ -0.34
TRAFD1-203ENST00000547063 RSRP1Q9BUV0 290 aa12.94□□□□□ -0.34
TRAFD1-203ENST00000547063 C20orf85Q9H1P6 137 aa12.94□□□□□ -0.34
TRAFD1-203ENST00000547063 OR2D2Q9H210 308 aa12.94□□□□□ -0.34
TRAFD1-203ENST00000547063 C7orf69Q9H7B7 122 aa12.94□□□□□ -0.34
TRAFD1-203ENST00000547063 SIRT7Q9NRC8 400 aa12.94□□□□□ -0.34
TRAFD1-203ENST00000547063 KCNS2Q9ULS6 477 aa12.94□□□□□ -0.34
TRAFD1-203ENST00000547063 GPR132Q9UNW8 380 aa12.94□□□□□ -0.34
TRAFD1-203ENST00000547063 GAB2Q9UQC2 676 aa12.94□□□□□ -0.34
TRAFD1-203ENST00000547063 NOTCH2Q04721 2471 aa12.93□□□□□ -0.34
TRAFD1-203ENST00000547063 IGKV1D-13A0A0B4J2D9 117 aa12.93□□□□□ -0.34
TRAFD1-203ENST00000547063 GPR31O00270 319 aa12.93□□□□□ -0.34
TRAFD1-203ENST00000547063 RAB29O14966 203 aa12.93□□□□□ -0.34
TRAFD1-203ENST00000547063 H2AFB2P0C5Z0 115 aa12.93□□□□□ -0.34
TRAFD1-203ENST00000547063 IGKV1-13P0DP09 117 aa12.93□□□□□ -0.34
TRAFD1-203ENST00000547063 GPR12P47775 334 aa12.93□□□□□ -0.34
TRAFD1-203ENST00000547063 UBE2MP61081 183 aaKnown RBP12.93□□□□□ -0.34
TRAFD1-203ENST00000547063 FAHD2BQ6P2I3 314 aaPredicted RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms