RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 HABP2Q14520 560 aaPredicted RBP11.65□□□□□ -0.54
DDX54-203ENST00000546869 FAM53AQ6NSI3 398 aaPredicted RBP11.65□□□□□ -0.54
DDX54-203ENST00000546869 C5orf24Q7Z6I8 188 aa11.65□□□□□ -0.54
DDX54-203ENST00000546869 OR8H3Q8N146 312 aa11.65□□□□□ -0.54
DDX54-203ENST00000546869 OR10V1Q8NGI7 309 aa11.65□□□□□ -0.54
DDX54-203ENST00000546869 SPATA3Q8NHX4 192 aa11.65□□□□□ -0.54
DDX54-203ENST00000546869 IL1F10Q8WWZ1 152 aa11.65□□□□□ -0.54
DDX54-203ENST00000546869 CABLES2Q9BTV7 478 aa11.65□□□□□ -0.54
DDX54-203ENST00000546869 COMMD3Q9UBI1 195 aa11.65□□□□□ -0.54
DDX54-203ENST00000546869 ELF5Q9UKW6 265 aaPredicted RBP11.65□□□□□ -0.54
DDX54-203ENST00000546869 TCF19Q9Y242 345 aa11.65□□□□□ -0.54
DDX54-203ENST00000546869 TRBV6-7A0A0A0MS04 114 aa11.64□□□□□ -0.55
DDX54-203ENST00000546869 IGKV1-6A0A0C4DH72 117 aa11.64□□□□□ -0.55
DDX54-203ENST00000546869 A0A1W2PPE3 182 aa11.64□□□□□ -0.55
DDX54-203ENST00000546869 A6NDX4 124 aa11.64□□□□□ -0.55
DDX54-203ENST00000546869 H3BMQ9 156 aa11.64□□□□□ -0.55
DDX54-203ENST00000546869 ZNF701M0R085 212 aaPredicted RBP11.64□□□□□ -0.55
DDX54-203ENST00000546869 SLC31A2O15432 143 aa11.64□□□□□ -0.55
DDX54-203ENST00000546869 SSX5O60225 188 aa11.64□□□□□ -0.55
DDX54-203ENST00000546869 NOL3O60936 208 aaKnown RBP11.64□□□□□ -0.55
DDX54-203ENST00000546869 NDUFA7O95182 113 aa11.64□□□□□ -0.55
DDX54-203ENST00000546869 CRYBA1P05813 215 aa11.64□□□□□ -0.55
DDX54-203ENST00000546869 CTXN2P0C2S0 81 aa11.64□□□□□ -0.55
DDX54-203ENST00000546869 PAX6P26367 422 aa11.64□□□□□ -0.55
DDX54-203ENST00000546869 PPP1CCP36873 323 aaKnown RBP11.64□□□□□ -0.55
DDX54-203ENST00000546869 GNG2P59768 71 aa11.64□□□□□ -0.55
DDX54-203ENST00000546869 FOXL1Q12952 345 aa11.64□□□□□ -0.55
DDX54-203ENST00000546869 GNMTQ14749 295 aa11.64□□□□□ -0.55
DDX54-203ENST00000546869 DTX3Q8N9I9 347 aa11.64□□□□□ -0.55
DDX54-203ENST00000546869 OR2AK2Q8NG84 335 aa11.64□□□□□ -0.55
DDX54-203ENST00000546869 DYNC2LI1Q8TCX1 351 aa11.64□□□□□ -0.55
DDX54-203ENST00000546869 EDARADDQ8WWZ3 215 aa11.64□□□□□ -0.55
DDX54-203ENST00000546869 TOMM40LQ969M1 308 aa11.64□□□□□ -0.55
DDX54-203ENST00000546869 ISOC1Q96CN7 298 aa11.64□□□□□ -0.55
DDX54-203ENST00000546869 AGMATQ9BSE5 352 aa11.64□□□□□ -0.55
DDX54-203ENST00000546869 ABHD14AQ9BUJ0 271 aa11.64□□□□□ -0.55
DDX54-203ENST00000546869 ZNF230Q9UIE0 474 aaPredicted RBP11.64□□□□□ -0.55
DDX54-203ENST00000546869 MMP24Q9Y5R2 645 aa11.64□□□□□ -0.55
DDX54-203ENST00000546869 A0A1B0GUS0 222 aa11.63□□□□□ -0.55
DDX54-203ENST00000546869 SMIM31A0A1B0GVY4 71 aa11.63□□□□□ -0.55
DDX54-203ENST00000546869 A0A1W2PPI3 338 aa11.63□□□□□ -0.55
DDX54-203ENST00000546869 HSD17B6O14756 317 aa11.63□□□□□ -0.55
DDX54-203ENST00000546869 LANCL1O43813 399 aa11.63□□□□□ -0.55
DDX54-203ENST00000546869 LPLP06858 475 aa11.63□□□□□ -0.55
DDX54-203ENST00000546869 GSTT2P0CG29 244 aa11.63□□□□□ -0.55
DDX54-203ENST00000546869 GSTT2BP0CG30 244 aa11.63□□□□□ -0.55
DDX54-203ENST00000546869 CEACAM6P40199 344 aa11.63□□□□□ -0.55
DDX54-203ENST00000546869 CBX5P45973 191 aa11.63□□□□□ -0.55
DDX54-203ENST00000546869 RAB13P51153 203 aa11.63□□□□□ -0.55
DDX54-203ENST00000546869 ACTG1P63261 375 aa11.63□□□□□ -0.55
DDX54-203ENST00000546869 HERPUD1Q15011 391 aa11.63□□□□□ -0.55
DDX54-203ENST00000546869 FAM71F2Q6NXP2 309 aa11.63□□□□□ -0.55
DDX54-203ENST00000546869 CCBE1Q6UXH8 406 aaPredicted RBP11.63□□□□□ -0.55
DDX54-203ENST00000546869 C16orf82Q7Z2V1 217 aa11.63□□□□□ -0.55
DDX54-203ENST00000546869 ODF3L1Q8IXM7 274 aa11.63□□□□□ -0.55
DDX54-203ENST00000546869 RTN4IP1Q8WWV3 396 aaPredicted RBP11.63□□□□□ -0.55
DDX54-203ENST00000546869 CFHR4Q92496 578 aa11.63□□□□□ -0.55
DDX54-203ENST00000546869 GCDHQ92947 438 aaPredicted RBP11.63□□□□□ -0.55
DDX54-203ENST00000546869 RBM38Q9H0Z9 239 aaKnown RBP11.63□□□□□ -0.55
DDX54-203ENST00000546869 TNFRSF19Q9NS68 423 aa11.63□□□□□ -0.55
DDX54-203ENST00000546869 C1RLQ9NZP8 487 aa11.63□□□□□ -0.55
DDX54-203ENST00000546869 CCDC59Q9P031 241 aaKnown RBP11.63□□□□□ -0.55
DDX54-203ENST00000546869 PIPOXQ9P0Z9 390 aa11.63□□□□□ -0.55
DDX54-203ENST00000546869 SLC23A1Q9UHI7 598 aa11.63□□□□□ -0.55
DDX54-203ENST00000546869 IGHV1-3A0A0C4DH29 117 aa11.62□□□□□ -0.55
DDX54-203ENST00000546869 HSPA12AO43301 675 aa11.62□□□□□ -0.55
DDX54-203ENST00000546869 TSPAN9O75954 239 aa11.62□□□□□ -0.55
DDX54-203ENST00000546869 HLA-DQB1P01920 261 aa11.62□□□□□ -0.55
DDX54-203ENST00000546869 EIF4EP06730 217 aaKnown RBP11.62□□□□□ -0.55
DDX54-203ENST00000546869 FAM106CPP0CH98 169 aa11.62□□□□□ -0.55
DDX54-203ENST00000546869 ELK1P19419 428 aa11.62□□□□□ -0.55
DDX54-203ENST00000546869 EBI3Q14213 229 aa11.62□□□□□ -0.55
DDX54-203ENST00000546869 DIAPH2-AS1Q14236 149 aa11.62□□□□□ -0.55
DDX54-203ENST00000546869 TMEM69Q5SWH9 247 aa11.62□□□□□ -0.55
DDX54-203ENST00000546869 CNIH2Q6PI25 160 aa11.62□□□□□ -0.55
DDX54-203ENST00000546869 HOGA1Q86XE5 327 aa11.62□□□□□ -0.55
DDX54-203ENST00000546869 OR10J5Q8NHC4 309 aa11.62□□□□□ -0.55
DDX54-203ENST00000546869 NUDCD2Q8WVJ2 157 aa11.62□□□□□ -0.55
DDX54-203ENST00000546869 ST6GALNAC5Q9BVH7 336 aa11.62□□□□□ -0.55
DDX54-203ENST00000546869 IFI27L2Q9H2X8 130 aa11.62□□□□□ -0.55
DDX54-203ENST00000546869 C16orf95Q9H693 158 aa11.62□□□□□ -0.55
DDX54-203ENST00000546869 GAB2Q9UQC2 676 aa11.62□□□□□ -0.55
DDX54-203ENST00000546869 IGKV1D-8A0A087WSZ0 117 aa11.61□□□□□ -0.55
DDX54-203ENST00000546869 RAB29O14966 203 aa11.61□□□□□ -0.55
DDX54-203ENST00000546869 CD1BP29016 333 aa11.61□□□□□ -0.55
DDX54-203ENST00000546869 TAS2R20P59543 309 aa11.61□□□□□ -0.55
DDX54-203ENST00000546869 LY6EQ16553 131 aa11.61□□□□□ -0.55
DDX54-203ENST00000546869 PLA1AQ53H76 456 aa11.61□□□□□ -0.55
DDX54-203ENST00000546869 IGSF11Q5DX21 431 aa11.61□□□□□ -0.55
DDX54-203ENST00000546869 DHRS7BQ6IAN0 325 aaPredicted RBP11.61□□□□□ -0.55
DDX54-203ENST00000546869 ZNF833PQ6ZTB9 187 aa11.61□□□□□ -0.55
DDX54-203ENST00000546869 TGIF2LXQ8IUE1 241 aa11.61□□□□□ -0.55
DDX54-203ENST00000546869 LYG1Q8N1E2 194 aa11.61□□□□□ -0.55
DDX54-203ENST00000546869 C11orf54Q9H0W9 315 aaPredicted RBP11.61□□□□□ -0.55
DDX54-203ENST00000546869 RANBP3Q9H6Z4 567 aaPredicted RBP11.61□□□□□ -0.55
DDX54-203ENST00000546869 RDH8Q9NYR8 311 aa11.61□□□□□ -0.55
DDX54-203ENST00000546869 OR1A1Q9P1Q5 309 aa11.61□□□□□ -0.55
DDX54-203ENST00000546869 ANXA10Q9UJ72 324 aa11.61□□□□□ -0.55
DDX54-203ENST00000546869 ADAM30Q9UKF2 790 aa11.61□□□□□ -0.55
DDX54-203ENST00000546869 TIMM23O14925 209 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms