RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 CEACAM6P40199 344 aa13.37□□□□□ -0.27
LDLR-204ENST00000545707 GLIPR1P48060 266 aa13.37□□□□□ -0.27
LDLR-204ENST00000545707 DCAF10Q5QP82 559 aa13.37□□□□□ -0.27
LDLR-204ENST00000545707 TOLLIPQ9H0E2 274 aa13.37□□□□□ -0.27
LDLR-204ENST00000545707 IL17BQ9UHF5 180 aa13.37□□□□□ -0.27
LDLR-204ENST00000545707 A0A087WWC5 75 aa13.36□□□□□ -0.27
LDLR-204ENST00000545707 TFF1P04155 84 aa13.36□□□□□ -0.27
LDLR-204ENST00000545707 MDKP21741 143 aaPredicted RBP13.36□□□□□ -0.27
LDLR-204ENST00000545707 RPS16P62249 146 aaKnown RBP13.36□□□□□ -0.27
LDLR-204ENST00000545707 OR8G2PQ6IF36 304 aa13.36□□□□□ -0.27
LDLR-204ENST00000545707 C1orf210Q8IVY1 113 aa13.36□□□□□ -0.27
LDLR-204ENST00000545707 LILRB2Q8N423 598 aa13.36□□□□□ -0.27
LDLR-204ENST00000545707 SCCPDHQ8NBX0 429 aa13.36□□□□□ -0.27
LDLR-204ENST00000545707 SSX3Q99909 188 aa13.36□□□□□ -0.27
LDLR-204ENST00000545707 OR2J1Q9GZK6 312 aa13.36□□□□□ -0.27
LDLR-204ENST00000545707 GTF3C1Q12789 2109 aa13.36□□□□□ -0.27
LDLR-204ENST00000545707 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.35□□□□□ -0.27
LDLR-204ENST00000545707 HIST1H2BKO60814 126 aa13.35□□□□□ -0.27
LDLR-204ENST00000545707 HIST1H2BJP06899 126 aa13.35□□□□□ -0.27
LDLR-204ENST00000545707 HIST1H2BOP23527 126 aa13.35□□□□□ -0.27
LDLR-204ENST00000545707 HIST1H2BBP33778 126 aa13.35□□□□□ -0.27
LDLR-204ENST00000545707 MEOX1P50221 254 aa13.35□□□□□ -0.27
LDLR-204ENST00000545707 HIST1H2BDP58876 126 aa13.35□□□□□ -0.27
LDLR-204ENST00000545707 HIST1H2BCP62807 126 aa13.35□□□□□ -0.27
LDLR-204ENST00000545707 HIST2H2BEQ16778 126 aa13.35□□□□□ -0.27
LDLR-204ENST00000545707 C4orf17Q53FE4 359 aa13.35□□□□□ -0.27
LDLR-204ENST00000545707 FAM209BQ5JX69 171 aa13.35□□□□□ -0.27
LDLR-204ENST00000545707 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.35□□□□□ -0.27
LDLR-204ENST00000545707 LINC00596Q86U02 117 aa13.35□□□□□ -0.27
LDLR-204ENST00000545707 ZNF610Q8N9Z0 462 aa13.35□□□□□ -0.27
LDLR-204ENST00000545707 HIST1H2BHQ93079 126 aa13.35□□□□□ -0.27
LDLR-204ENST00000545707 RCC1LQ96I51 464 aaKnown RBP13.35□□□□□ -0.27
LDLR-204ENST00000545707 OR4C12Q96R67 309 aa13.35□□□□□ -0.27
LDLR-204ENST00000545707 HIST1H2BNQ99877 126 aa13.35□□□□□ -0.27
LDLR-204ENST00000545707 HIST1H2BMQ99879 126 aa13.35□□□□□ -0.27
LDLR-204ENST00000545707 ZFHX4Q86UP3 3567 aa13.35□□□□□ -0.27
LDLR-204ENST00000545707 J3QT63 122 aa13.35□□□□□ -0.27
LDLR-204ENST00000545707 GRPP07492 148 aa13.35□□□□□ -0.27
LDLR-204ENST00000545707 CD55P08174 381 aa13.35□□□□□ -0.27
LDLR-204ENST00000545707 PYY3Q5JQD4 70 aa13.35□□□□□ -0.27
LDLR-204ENST00000545707 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.35□□□□□ -0.27
LDLR-204ENST00000545707 SLC35E3Q7Z769 313 aa13.35□□□□□ -0.27
LDLR-204ENST00000545707 CXorf67Q86X51 503 aaPredicted RBP13.35□□□□□ -0.27
LDLR-204ENST00000545707 DRAM1Q8N682 238 aa13.35□□□□□ -0.27
LDLR-204ENST00000545707 CACNA1DQ01668 2161 aa13.35□□□□□ -0.27
LDLR-204ENST00000545707 CFAP47Q6ZTR5 3102 aa13.35□□□□□ -0.27
LDLR-204ENST00000545707 CHD3Q12873 2000 aaKnown RBP13.34□□□□□ -0.27
LDLR-204ENST00000545707 CEBPZOSA8MTT3 80 aa13.34□□□□□ -0.27
LDLR-204ENST00000545707 RAMP3O60896 148 aa13.34□□□□□ -0.27
LDLR-204ENST00000545707 BCL2P10415 239 aa13.34□□□□□ -0.27
LDLR-204ENST00000545707 ZNF497Q6ZNH5 498 aa13.34□□□□□ -0.27
LDLR-204ENST00000545707 STRADBQ9C0K7 418 aa13.34□□□□□ -0.27
LDLR-204ENST00000545707 TMEM265A0A087WTH1 108 aa13.34□□□□□ -0.27
LDLR-204ENST00000545707 UBE2L5PA0A1B0GUS4 154 aa13.34□□□□□ -0.27
LDLR-204ENST00000545707 IGHV2-70P01814 119 aa13.34□□□□□ -0.27
LDLR-204ENST00000545707 CDX1P47902 265 aaPredicted RBP13.34□□□□□ -0.27
LDLR-204ENST00000545707 ATP1A1-AS1Q5TC04 95 aa13.34□□□□□ -0.27
LDLR-204ENST00000545707 DPPA3Q6W0C5 159 aa13.34□□□□□ -0.27
LDLR-204ENST00000545707 FGFRL1Q8N441 504 aa13.34□□□□□ -0.27
LDLR-204ENST00000545707 BCL2L2Q92843 193 aaPredicted RBP13.34□□□□□ -0.27
LDLR-204ENST00000545707 LSM10Q969L4 123 aaKnown RBP13.34□□□□□ -0.27
LDLR-204ENST00000545707 PKIBQ9C010 78 aa13.34□□□□□ -0.27
LDLR-204ENST00000545707 TRAV1-1A0A0B4J248 108 aa13.33□□□□□ -0.27
LDLR-204ENST00000545707 NXPH2O95156 264 aa13.33□□□□□ -0.27
LDLR-204ENST00000545707 SLC25A6P12236 298 aa13.33□□□□□ -0.27
LDLR-204ENST00000545707 S100PP25815 95 aa13.33□□□□□ -0.27
LDLR-204ENST00000545707 ZNF808Q8N4W9 903 aaPredicted RBP13.33□□□□□ -0.27
LDLR-204ENST00000545707 CA5BP1Q8WTZ4 195 aa13.33□□□□□ -0.27
LDLR-204ENST00000545707 WDYHV1Q96HA8 205 aa13.33□□□□□ -0.27
LDLR-204ENST00000545707 ARRDC1-AS1Q9H2J1 176 aa13.33□□□□□ -0.27
LDLR-204ENST00000545707 GP6Q9HCN6 339 aa13.33□□□□□ -0.27
LDLR-204ENST00000545707 ARHGAP21Q5T5U3 1957 aa13.33□□□□□ -0.28
LDLR-204ENST00000545707 KRASP01116 189 aa13.33□□□□□ -0.28
LDLR-204ENST00000545707 IGKV1D-33P01593 117 aa13.33□□□□□ -0.28
LDLR-204ENST00000545707 IGKV1-33P01594 117 aa13.33□□□□□ -0.28
LDLR-204ENST00000545707 MDH2P40926 338 aaKnown RBP13.33□□□□□ -0.28
LDLR-204ENST00000545707 IDH3GP51553 393 aaPredicted RBP13.33□□□□□ -0.28
LDLR-204ENST00000545707 LINC00205P59089 165 aa13.33□□□□□ -0.28
LDLR-204ENST00000545707 LRRC75BQ2VPJ9 315 aa13.33□□□□□ -0.28
LDLR-204ENST00000545707 RNFT1Q5M7Z0 435 aa13.33□□□□□ -0.28
LDLR-204ENST00000545707 OR1L1Q8NH94 360 aa13.33□□□□□ -0.28
LDLR-204ENST00000545707 IER2Q9BTL4 223 aa13.33□□□□□ -0.28
LDLR-204ENST00000545707 GPR61Q9BZJ8 451 aa13.33□□□□□ -0.28
LDLR-204ENST00000545707 OPA3Q9H6K4 179 aa13.33□□□□□ -0.28
LDLR-204ENST00000545707 TMEM9BQ9NQ34 198 aa13.33□□□□□ -0.28
LDLR-204ENST00000545707 CISD1Q9NZ45 108 aaKnown RBP13.33□□□□□ -0.28
LDLR-204ENST00000545707 PRR14LQ5THK1 2151 aa13.33□□□□□ -0.28
LDLR-204ENST00000545707 CLDN1O95832 211 aa13.32□□□□□ -0.28
LDLR-204ENST00000545707 SP1P08047 785 aa13.32□□□□□ -0.28
LDLR-204ENST00000545707 SOD3P08294 240 aa13.32□□□□□ -0.28
LDLR-204ENST00000545707 ZNF816Q0VGE8 651 aaPredicted RBP13.32□□□□□ -0.28
LDLR-204ENST00000545707 FBXW9Q5XUX1 488 aa13.32□□□□□ -0.28
LDLR-204ENST00000545707 ABHD5Q8WTS1 349 aa13.32□□□□□ -0.28
LDLR-204ENST00000545707 FRZBQ92765 325 aa13.32□□□□□ -0.28
LDLR-204ENST00000545707 RTL8AQ9BWD3 113 aa13.32□□□□□ -0.28
LDLR-204ENST00000545707 RBKSQ9H477 322 aa13.32□□□□□ -0.28
LDLR-204ENST00000545707 SIRT7Q9NRC8 400 aa13.32□□□□□ -0.28
LDLR-204ENST00000545707 ABI3Q9P2A4 366 aa13.32□□□□□ -0.28
LDLR-204ENST00000545707 WNT9BO14905 357 aa13.32□□□□□ -0.28
LDLR-204ENST00000545707 PSPNO60542 156 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms