RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 ETV3LQ6ZN32 361 aa11.02□□□□□ -0.65
CPSF7-223ENST00000544669 DRAM1Q8N682 238 aa11.02□□□□□ -0.65
CPSF7-223ENST00000544669 DEFB123Q8N688 67 aa11.02□□□□□ -0.65
CPSF7-223ENST00000544669 SLC25A40Q8TBP6 338 aa11.02□□□□□ -0.65
CPSF7-223ENST00000544669 ISOC2Q96AB3 205 aa11.02□□□□□ -0.65
CPSF7-223ENST00000544669 WDR61Q9GZS3 305 aaKnown RBP11.02□□□□□ -0.65
CPSF7-223ENST00000544669 HSPB7Q9UBY9 170 aa11.02□□□□□ -0.65
CPSF7-223ENST00000544669 NCKAP5O14513 1909 aa11.01□□□□□ -0.65
CPSF7-223ENST00000544669 A0A1W2PPE2 198 aa11.01□□□□□ -0.65
CPSF7-223ENST00000544669 CDIPTO14735 213 aa11.01□□□□□ -0.65
CPSF7-223ENST00000544669 IGLV2-14P01704 120 aa11.01□□□□□ -0.65
CPSF7-223ENST00000544669 ADH4P08319 380 aa11.01□□□□□ -0.65
CPSF7-223ENST00000544669 ZNF16P17020 682 aaPredicted RBP11.01□□□□□ -0.65
CPSF7-223ENST00000544669 B2MP61769 119 aa11.01□□□□□ -0.65
CPSF7-223ENST00000544669 CTAG1AP78358 180 aa11.01□□□□□ -0.65
CPSF7-223ENST00000544669 RUNX1Q01196 453 aa11.01□□□□□ -0.65
CPSF7-223ENST00000544669 ZNF585BQ52M93 769 aa11.01□□□□□ -0.65
CPSF7-223ENST00000544669 TMEM14EPQ6UXP3 125 aa11.01□□□□□ -0.65
CPSF7-223ENST00000544669 FAM169BQ8N8A8 192 aa11.01□□□□□ -0.65
CPSF7-223ENST00000544669 PPP1R35Q8TAP8 253 aa11.01□□□□□ -0.65
CPSF7-223ENST00000544669 SARAFQ96BY9 339 aa11.01□□□□□ -0.65
CPSF7-223ENST00000544669 YPEL4Q96NS1 127 aa11.01□□□□□ -0.65
CPSF7-223ENST00000544669 HSD17B10Q99714 261 aaKnown RBP11.01□□□□□ -0.65
CPSF7-223ENST00000544669 MRPL37Q9BZE1 423 aaKnown RBP11.01□□□□□ -0.65
CPSF7-223ENST00000544669 IL17BQ9UHF5 180 aa11.01□□□□□ -0.65
CPSF7-223ENST00000544669 A0A1B0GV50 99 aa11□□□□□ -0.65
CPSF7-223ENST00000544669 FAM90A9PA6NNJ1 464 aa11□□□□□ -0.65
CPSF7-223ENST00000544669 C1QTNF9BB2RNN3 333 aa11□□□□□ -0.65
CPSF7-223ENST00000544669 C17orf112F2Z3M2 114 aa11□□□□□ -0.65
CPSF7-223ENST00000544669 CLDN34H7C241 214 aa11□□□□□ -0.65
CPSF7-223ENST00000544669 M0R296 226 aa11□□□□□ -0.65
CPSF7-223ENST00000544669 RAB29O14966 203 aa11□□□□□ -0.65
CPSF7-223ENST00000544669 LILRA1O75019 489 aa11□□□□□ -0.65
CPSF7-223ENST00000544669 IGKV1-39P01597 117 aa11□□□□□ -0.65
CPSF7-223ENST00000544669 IGKV1-5P01602 117 aa11□□□□□ -0.65
CPSF7-223ENST00000544669 IGKV1D-39P04432 117 aa11□□□□□ -0.65
CPSF7-223ENST00000544669 ARG1P05089 322 aa11□□□□□ -0.65
CPSF7-223ENST00000544669 KITLGP21583 273 aa11□□□□□ -0.65
CPSF7-223ENST00000544669 S100PP25815 95 aa11□□□□□ -0.65
CPSF7-223ENST00000544669 RPS10P46783 165 aaKnown RBP11□□□□□ -0.65
CPSF7-223ENST00000544669 TNFSF10P50591 281 aa11□□□□□ -0.65
CPSF7-223ENST00000544669 IDH3GP51553 393 aaPredicted RBP11□□□□□ -0.65
CPSF7-223ENST00000544669 TNFRSF9Q07011 255 aa11□□□□□ -0.65
CPSF7-223ENST00000544669 SLC38A11Q08AI6 406 aa11□□□□□ -0.65
CPSF7-223ENST00000544669 SMIM21Q3B7S5 101 aa11□□□□□ -0.65
CPSF7-223ENST00000544669 HES3Q5TGS1 186 aa11□□□□□ -0.65
CPSF7-223ENST00000544669 FAM90A1Q86YD7 464 aa11□□□□□ -0.65
CPSF7-223ENST00000544669 CYB561D1Q8N8Q1 229 aa11□□□□□ -0.65
CPSF7-223ENST00000544669 EDARADDQ8WWZ3 215 aa11□□□□□ -0.65
CPSF7-223ENST00000544669 TAF15Q92804 592 aaKnown RBP eCLIP11□□□□□ -0.65
CPSF7-223ENST00000544669 RPRMQ9NS64 109 aa11□□□□□ -0.65
CPSF7-223ENST00000544669 SLC39A9Q9NUM3 307 aa11□□□□□ -0.65
CPSF7-223ENST00000544669 GNG13Q9P2W3 67 aa11□□□□□ -0.65
CPSF7-223ENST00000544669 SPRR3Q9UBC9 169 aa11□□□□□ -0.65
CPSF7-223ENST00000544669 CLCF1Q9UBD9 225 aa11□□□□□ -0.65
CPSF7-223ENST00000544669 A0A0G2JRQ6 117 aa11□□□□□ -0.65
CPSF7-223ENST00000544669 A0A1W2PR80 420 aa11□□□□□ -0.65
CPSF7-223ENST00000544669 AQP7O14520 342 aa11□□□□□ -0.65
CPSF7-223ENST00000544669 CDX4O14627 284 aaPredicted RBP11□□□□□ -0.65
CPSF7-223ENST00000544669 CLDN14O95500 239 aa11□□□□□ -0.65
CPSF7-223ENST00000544669 CYB5R3P00387 301 aaPredicted RBP11□□□□□ -0.65
CPSF7-223ENST00000544669 OPN1MWP04001 364 aa11□□□□□ -0.65
CPSF7-223ENST00000544669 METTL15P1P0C7V9 234 aa11□□□□□ -0.65
CPSF7-223ENST00000544669 OPN1MW2P0DN77 364 aa11□□□□□ -0.65
CPSF7-223ENST00000544669 OPN1MW3P0DN78 364 aa11□□□□□ -0.65
CPSF7-223ENST00000544669 DAOP14920 347 aa11□□□□□ -0.65
CPSF7-223ENST00000544669 IGHV1-2P23083 117 aa11□□□□□ -0.65
CPSF7-223ENST00000544669 GCH1P30793 250 aa11□□□□□ -0.65
CPSF7-223ENST00000544669 CD81P60033 236 aa11□□□□□ -0.65
CPSF7-223ENST00000544669 TMEM267Q0VDI3 215 aaPredicted RBP11□□□□□ -0.65
CPSF7-223ENST00000544669 ZNF718Q3SXZ3 478 aa11□□□□□ -0.65
CPSF7-223ENST00000544669 SPANXN5Q5MJ07 72 aa11□□□□□ -0.65
CPSF7-223ENST00000544669 Q6ZRM9 215 aa11□□□□□ -0.65
CPSF7-223ENST00000544669 PRR18Q8N4B5 295 aa11□□□□□ -0.65
CPSF7-223ENST00000544669 ZNF709Q8N972 641 aa11□□□□□ -0.65
CPSF7-223ENST00000544669 OR10P1Q8NGE3 313 aa11□□□□□ -0.65
CPSF7-223ENST00000544669 ABHD14AQ9BUJ0 271 aa11□□□□□ -0.65
CPSF7-223ENST00000544669 TMEM147Q9BVK8 224 aa11□□□□□ -0.65
CPSF7-223ENST00000544669 OR51B6Q9H340 312 aa11□□□□□ -0.65
CPSF7-223ENST00000544669 SDK2Q58EX2 2172 aa11□□□□□ -0.65
CPSF7-223ENST00000544669 A0A0C4DFX4 3053 aa10.99□□□□□ -0.65
CPSF7-223ENST00000544669 ELOA3CA0A087WX78 387 aaPredicted RBP10.99□□□□□ -0.65
CPSF7-223ENST00000544669 A0A1W2PNU3 283 aaPredicted RBP10.99□□□□□ -0.65
CPSF7-223ENST00000544669 hCG_1809904A0A1W2PP81 198 aa10.99□□□□□ -0.65
CPSF7-223ENST00000544669 A0A1W2PR64 198 aa10.99□□□□□ -0.65
CPSF7-223ENST00000544669 A0A1W2PRV1 198 aa10.99□□□□□ -0.65
CPSF7-223ENST00000544669 ARGFXA6NJG6 315 aa10.99□□□□□ -0.65
CPSF7-223ENST00000544669 TMEM250H0YL14 139 aa10.99□□□□□ -0.65
CPSF7-223ENST00000544669 SPINT2O43291 252 aa10.99□□□□□ -0.65
CPSF7-223ENST00000544669 IGKV3-15P01624 115 aa10.99□□□□□ -0.65
CPSF7-223ENST00000544669 GRPP07492 148 aa10.99□□□□□ -0.65
CPSF7-223ENST00000544669 HTD2P86397 168 aa10.99□□□□□ -0.65
CPSF7-223ENST00000544669 PSG7Q13046 419 aa10.99□□□□□ -0.65
CPSF7-223ENST00000544669 KIAA0141Q14154 515 aaPredicted RBP10.99□□□□□ -0.65
CPSF7-223ENST00000544669 C3AR1Q16581 482 aa10.99□□□□□ -0.65
CPSF7-223ENST00000544669 SPATA46Q5T0L3 261 aa10.99□□□□□ -0.65
CPSF7-223ENST00000544669 WDR86Q86TI4 376 aa10.99□□□□□ -0.65
CPSF7-223ENST00000544669 C1orf87Q8N0U7 546 aa10.99□□□□□ -0.65
CPSF7-223ENST00000544669 KLF14Q8TD94 323 aaPredicted RBP10.99□□□□□ -0.65
CPSF7-223ENST00000544669 AGMATQ9BSE5 352 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms