RNA–Protein interactions for RNA: ENST00000544344.5

CD4-212, Transcript of CD4 molecule, humanhuman

TSL 2

Gene CD4, Length 1,056 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-212ENST00000544344 FBXL15Q9H469 300 aa11.8□□□□□ -0.52
CD4-212ENST00000544344 TAF9BQ9HBM6 251 aa11.8□□□□□ -0.52
CD4-212ENST00000544344 TMEM138Q9NPI0 162 aa11.8□□□□□ -0.52
CD4-212ENST00000544344 IMPAD1Q9NX62 359 aa11.8□□□□□ -0.52
CD4-212ENST00000544344 OAZ3Q9UMX2 235 aa11.8□□□□□ -0.52
CD4-212ENST00000544344 ERGIC3Q9Y282 383 aa11.8□□□□□ -0.52
CD4-212ENST00000544344 RRHO14718 337 aa11.79□□□□□ -0.52
CD4-212ENST00000544344 ARPC1BO15143 372 aaKnown RBP11.79□□□□□ -0.52
CD4-212ENST00000544344 SC5DO75845 299 aa11.79□□□□□ -0.52
CD4-212ENST00000544344 GTF2F2P13984 249 aa11.79□□□□□ -0.52
CD4-212ENST00000544344 PPP1CCP36873 323 aaKnown RBP11.79□□□□□ -0.52
CD4-212ENST00000544344 SLC22A6Q4U2R8 563 aa11.79□□□□□ -0.52
CD4-212ENST00000544344 MEDAGQ5VYS4 303 aa11.79□□□□□ -0.52
CD4-212ENST00000544344 PYHIN1Q6K0P9 492 aa11.79□□□□□ -0.52
CD4-212ENST00000544344 ORAI1Q96D31 301 aa11.79□□□□□ -0.52
CD4-212ENST00000544344 FAM110AQ9BQ89 295 aa11.79□□□□□ -0.52
CD4-212ENST00000544344 FAM103A1Q9BTL3 118 aaKnown RBP11.79□□□□□ -0.52
CD4-212ENST00000544344 RAB9BQ9NP90 201 aa11.79□□□□□ -0.52
CD4-212ENST00000544344 MBNL3Q9NUK0 354 aaKnown RBP11.79□□□□□ -0.52
CD4-212ENST00000544344 ERVK13-1Q9NX77 482 aa11.79□□□□□ -0.52
CD4-212ENST00000544344 ETAA1Q9NY74 926 aa11.79□□□□□ -0.52
CD4-212ENST00000544344 CNOT2Q9NZN8 540 aaKnown RBP11.79□□□□□ -0.52
CD4-212ENST00000544344 AP4S1Q9Y587 144 aa11.79□□□□□ -0.52
CD4-212ENST00000544344 GMPPBQ9Y5P6 360 aa11.79□□□□□ -0.52
CD4-212ENST00000544344 SAA2-SAA4A0A096LPE2 208 aa11.78□□□□□ -0.52
CD4-212ENST00000544344 MCRIP1C9JLW8 97 aa11.78□□□□□ -0.52
CD4-212ENST00000544344 ZNF780AO75290 641 aaPredicted RBP11.78□□□□□ -0.52
CD4-212ENST00000544344 RGS11O94810 467 aa11.78□□□□□ -0.52
CD4-212ENST00000544344 SAA2P0DJI9 122 aaPredicted RBP11.78□□□□□ -0.52
CD4-212ENST00000544344 GABRB1P18505 474 aa11.78□□□□□ -0.52
CD4-212ENST00000544344 TPPP2P59282 170 aa11.78□□□□□ -0.52
CD4-212ENST00000544344 MRPL28Q13084 256 aaKnown RBP11.78□□□□□ -0.52
CD4-212ENST00000544344 KLF5Q13887 457 aaPredicted RBP11.78□□□□□ -0.52
CD4-212ENST00000544344 AKIRIN2Q53H80 203 aa11.78□□□□□ -0.52
CD4-212ENST00000544344 ACTBL2Q562R1 376 aa11.78□□□□□ -0.52
CD4-212ENST00000544344 XAF1Q6GPH4 301 aa11.78□□□□□ -0.52
CD4-212ENST00000544344 RAB12Q6IQ22 244 aa11.78□□□□□ -0.52
CD4-212ENST00000544344 TRAT1Q6PIZ9 186 aa11.78□□□□□ -0.52
CD4-212ENST00000544344 IL17DQ8TAD2 202 aa11.78□□□□□ -0.52
CD4-212ENST00000544344 TMEM106AQ96A25 262 aa11.78□□□□□ -0.52
CD4-212ENST00000544344 MRPL48Q96GC5 212 aaKnown RBP11.78□□□□□ -0.52
CD4-212ENST00000544344 SPACA1Q9HBV2 294 aa11.78□□□□□ -0.52
CD4-212ENST00000544344 PAK1IP1Q9NWT1 392 aaPredicted RBP11.78□□□□□ -0.52
CD4-212ENST00000544344 JPT1Q9UK76 154 aa11.78□□□□□ -0.52
CD4-212ENST00000544344 PCLOQ9Y6V0 5065 aa11.78□□□□□ -0.52
CD4-212ENST00000544344 YPEL1O60688 119 aa11.77□□□□□ -0.53
CD4-212ENST00000544344 BDKRB2P30411 391 aa11.77□□□□□ -0.53
CD4-212ENST00000544344 TMEM267Q0VDI3 215 aaPredicted RBP11.77□□□□□ -0.53
CD4-212ENST00000544344 LY6G6FQ5SQ64 297 aa11.77□□□□□ -0.53
CD4-212ENST00000544344 UNQ5815/PRO19632Q6UWF5 114 aa11.77□□□□□ -0.53
CD4-212ENST00000544344 FAM131AQ6UXB0 335 aa11.77□□□□□ -0.53
CD4-212ENST00000544344 PPP1R27Q86WC6 154 aa11.77□□□□□ -0.53
CD4-212ENST00000544344 LFNGQ8NES3 379 aa11.77□□□□□ -0.53
CD4-212ENST00000544344 GPR148Q8TDV2 347 aa11.77□□□□□ -0.53
CD4-212ENST00000544344 YPEL2Q96QA6 119 aa11.77□□□□□ -0.53
CD4-212ENST00000544344 TMED9Q9BVK6 235 aa11.77□□□□□ -0.53
CD4-212ENST00000544344 IFI27L2Q9H2X8 130 aa11.77□□□□□ -0.53
CD4-212ENST00000544344 SLA2Q9H6Q3 261 aa11.77□□□□□ -0.53
CD4-212ENST00000544344 IZUMO1RA6ND01 250 aa11.76□□□□□ -0.53
CD4-212ENST00000544344 FADS2O95864 444 aaKnown RBP11.76□□□□□ -0.53
CD4-212ENST00000544344 CD2P06729 351 aa11.76□□□□□ -0.53
CD4-212ENST00000544344 IGFBP3P17936 291 aaPredicted RBP11.76□□□□□ -0.53
CD4-212ENST00000544344 GBX2P52951 348 aaPredicted RBP11.76□□□□□ -0.53
CD4-212ENST00000544344 HTD2P86397 168 aa11.76□□□□□ -0.53
CD4-212ENST00000544344 SIGIRRQ6IA17 410 aa11.76□□□□□ -0.53
CD4-212ENST00000544344 OR9G4Q8NGQ1 327 aa11.76□□□□□ -0.53
CD4-212ENST00000544344 MRPL30Q8TCC3 161 aaKnown RBP11.76□□□□□ -0.53
CD4-212ENST00000544344 LINC00476Q8WZB0 136 aa11.76□□□□□ -0.53
CD4-212ENST00000544344 CENPNQ96H22 339 aaPredicted RBP11.76□□□□□ -0.53
CD4-212ENST00000544344 RDH12Q96NR8 316 aa11.76□□□□□ -0.53
CD4-212ENST00000544344 S100A13Q99584 98 aa11.76□□□□□ -0.53
CD4-212ENST00000544344 ZNF184Q99676 751 aaPredicted RBP11.76□□□□□ -0.53
CD4-212ENST00000544344 TUBA4BQ9H853 241 aa11.76□□□□□ -0.53
CD4-212ENST00000544344 RANGRFQ9HD47 186 aaPredicted RBP11.76□□□□□ -0.53
CD4-212ENST00000544344 PEX16Q9Y5Y5 336 aa11.76□□□□□ -0.53
CD4-212ENST00000544344 SAC3D1A6NKF1 404 aa11.75□□□□□ -0.53
CD4-212ENST00000544344 H0Y980 276 aa11.75□□□□□ -0.53
CD4-212ENST00000544344 CA11O75493 328 aa11.75□□□□□ -0.53
CD4-212ENST00000544344 TRGV3P03979 118 aa11.75□□□□□ -0.53
CD4-212ENST00000544344 ALPLP05186 524 aa11.75□□□□□ -0.53
CD4-212ENST00000544344 CT45A6P0DMU7 189 aa11.75□□□□□ -0.53
CD4-212ENST00000544344 CT45A5P0DMU8 189 aa11.75□□□□□ -0.53
CD4-212ENST00000544344 CT45A7P0DMV0 189 aa11.75□□□□□ -0.53
CD4-212ENST00000544344 ZP3P21754 424 aa11.75□□□□□ -0.53
CD4-212ENST00000544344 PPP3R1P63098 170 aa11.75□□□□□ -0.53
CD4-212ENST00000544344 ZNF554Q86TJ5 538 aa11.75□□□□□ -0.53
CD4-212ENST00000544344 ABHD5Q8WTS1 349 aa11.75□□□□□ -0.53
CD4-212ENST00000544344 MRPS24Q96EL2 167 aaKnown RBP11.75□□□□□ -0.53
CD4-212ENST00000544344 MYCBPQ99417 103 aaPredicted RBP11.75□□□□□ -0.53
CD4-212ENST00000544344 AMBNQ9NP70 447 aa11.75□□□□□ -0.53
CD4-212ENST00000544344 ADAM30Q9UKF2 790 aa11.75□□□□□ -0.53
CD4-212ENST00000544344 RNF150Q9ULK6 438 aa11.75□□□□□ -0.53
CD4-212ENST00000544344 CEPT1Q9Y6K0 416 aa11.75□□□□□ -0.53
CD4-212ENST00000544344 UBE2QL1A1L167 161 aa11.74□□□□□ -0.53
CD4-212ENST00000544344 H0YJW9 148 aa11.74□□□□□ -0.53
CD4-212ENST00000544344 MAS1P04201 325 aa11.74□□□□□ -0.53
CD4-212ENST00000544344 TFAP2AP05549 437 aa11.74□□□□□ -0.53
CD4-212ENST00000544344 CSN3P07498 182 aa11.74□□□□□ -0.53
CD4-212ENST00000544344 LIMS3P0CW19 117 aa11.74□□□□□ -0.53
CD4-212ENST00000544344 LIMS4P0CW20 117 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms