RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 CBY1Q9Y3M2 126 aa8.91□□□□□ -0.98
CHFR-219ENST00000541341 PCNX3Q9H6A9 2034 aa8.91□□□□□ -0.98
CHFR-219ENST00000541341 NCKAP5O14513 1909 aa8.91□□□□□ -0.98
CHFR-219ENST00000541341 ANKRD17O75179 2603 aaKnown RBP8.9□□□□□ -0.98
CHFR-219ENST00000541341 PHF3Q92576 2039 aaKnown RBP8.9□□□□□ -0.98
CHFR-219ENST00000541341 TRAV9-1A0A075B6T8 112 aa8.9□□□□□ -0.98
CHFR-219ENST00000541341 OR6C6A6NF89 314 aa8.9□□□□□ -0.98
CHFR-219ENST00000541341 DHHO43323 396 aa8.9□□□□□ -0.98
CHFR-219ENST00000541341 OR2J2O76002 312 aa8.9□□□□□ -0.98
CHFR-219ENST00000541341 NRASP01111 189 aa8.9□□□□□ -0.98
CHFR-219ENST00000541341 TRGC2P03986 189 aa8.9□□□□□ -0.98
CHFR-219ENST00000541341 FABP4P15090 132 aa8.9□□□□□ -0.98
CHFR-219ENST00000541341 APLNRP35414 380 aa8.9□□□□□ -0.98
CHFR-219ENST00000541341 PPP1CCP36873 323 aaKnown RBP8.9□□□□□ -0.98
CHFR-219ENST00000541341 PSMB3P49720 205 aa8.9□□□□□ -0.98
CHFR-219ENST00000541341 PDLIM4P50479 330 aa8.9□□□□□ -0.98
CHFR-219ENST00000541341 SSR4P51571 173 aa8.9□□□□□ -0.98
CHFR-219ENST00000541341 RBPJQ06330 500 aa8.9□□□□□ -0.98
CHFR-219ENST00000541341 SLC10A1Q14973 349 aa8.9□□□□□ -0.98
CHFR-219ENST00000541341 RNPS1Q15287 305 aaKnown RBP8.9□□□□□ -0.98
CHFR-219ENST00000541341 C9orf152Q5JTZ5 239 aa8.9□□□□□ -0.98
CHFR-219ENST00000541341 SPINK14Q6IE38 97 aa8.9□□□□□ -0.98
CHFR-219ENST00000541341 ETV3LQ6ZN32 361 aa8.9□□□□□ -0.98
CHFR-219ENST00000541341 CYP2G1PQ6ZSU1 146 aa8.9□□□□□ -0.98
CHFR-219ENST00000541341 OR10AD1Q8NGE0 317 aa8.9□□□□□ -0.98
CHFR-219ENST00000541341 OR1P1Q8NH06 330 aa8.9□□□□□ -0.98
CHFR-219ENST00000541341 RTN4RQ9BZR6 473 aa8.9□□□□□ -0.98
CHFR-219ENST00000541341 MAGT1Q9H0U3 335 aa8.9□□□□□ -0.98
CHFR-219ENST00000541341 CALHM2Q9HA72 323 aa8.9□□□□□ -0.98
CHFR-219ENST00000541341 CDH20Q9HBT6 801 aa8.9□□□□□ -0.98
CHFR-219ENST00000541341 SH2D2AQ9NP31 389 aa8.9□□□□□ -0.98
CHFR-219ENST00000541341 DCAF16Q9NXF7 216 aa8.9□□□□□ -0.98
CHFR-219ENST00000541341 ABI3Q9P2A4 366 aa8.9□□□□□ -0.98
CHFR-219ENST00000541341 FOXD3Q9UJU5 478 aaPredicted RBP8.9□□□□□ -0.98
CHFR-219ENST00000541341 LIPGQ9Y5X9 500 aa8.9□□□□□ -0.98
CHFR-219ENST00000541341 F8P00451 2351 aa8.9□□□□□ -0.99
CHFR-219ENST00000541341 IGKV1D-43A0A0B4J1Z2 117 aa8.89□□□□□ -0.99
CHFR-219ENST00000541341 ZNF816-ZNF321PA0A0X1KG74 233 aa8.89□□□□□ -0.99
CHFR-219ENST00000541341 ZNF727A8MUV8 499 aa8.89□□□□□ -0.99
CHFR-219ENST00000541341 RER1O15258 196 aa8.89□□□□□ -0.99
CHFR-219ENST00000541341 TYMSP04818 313 aa8.89□□□□□ -0.99
CHFR-219ENST00000541341 EPHA1P21709 976 aa8.89□□□□□ -0.99
CHFR-219ENST00000541341 GNRHRP30968 328 aa8.89□□□□□ -0.99
CHFR-219ENST00000541341 CASP6P55212 293 aa8.89□□□□□ -0.99
CHFR-219ENST00000541341 FXYD4P59646 89 aa8.89□□□□□ -0.99
CHFR-219ENST00000541341 USF2Q15853 346 aaPredicted RBP8.89□□□□□ -0.99
CHFR-219ENST00000541341 HYAL4Q2M3T9 481 aa8.89□□□□□ -0.99
CHFR-219ENST00000541341 TMEM41BQ5BJD5 291 aa8.89□□□□□ -0.99
CHFR-219ENST00000541341 TMEM42Q69YG0 159 aa8.89□□□□□ -0.99
CHFR-219ENST00000541341 CLEC9AQ6UXN8 241 aa8.89□□□□□ -0.99
CHFR-219ENST00000541341 C16orf47Q6ZP98 133 aaPredicted RBP8.89□□□□□ -0.99
CHFR-219ENST00000541341 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.89□□□□□ -0.99
CHFR-219ENST00000541341 CENPVQ7Z7K6 275 aaPredicted RBP8.89□□□□□ -0.99
CHFR-219ENST00000541341 MKXQ8IYA7 352 aa8.89□□□□□ -0.99
CHFR-219ENST00000541341 C20orf196Q8IYI0 205 aa8.89□□□□□ -0.99
CHFR-219ENST00000541341 SELENOHQ8IZQ5 122 aaKnown RBP8.89□□□□□ -0.99
CHFR-219ENST00000541341 GPR137CQ8N3F9 429 aa8.89□□□□□ -0.99
CHFR-219ENST00000541341 CYB561D1Q8N8Q1 229 aa8.89□□□□□ -0.99
CHFR-219ENST00000541341 OR5L1Q8NGL2 311 aa8.89□□□□□ -0.99
CHFR-219ENST00000541341 THAP3Q8WTV1 239 aaPredicted RBP8.89□□□□□ -0.99
CHFR-219ENST00000541341 PIGTQ969N2 578 aa8.89□□□□□ -0.99
CHFR-219ENST00000541341 SPACA9Q96E40 222 aaPredicted RBP8.89□□□□□ -0.99
CHFR-219ENST00000541341 SPACA5Q96QH8 159 aa8.89□□□□□ -0.99
CHFR-219ENST00000541341 NKX3-1Q99801 234 aaPredicted RBP8.89□□□□□ -0.99
CHFR-219ENST00000541341 FAAP24Q9BTP7 215 aa8.89□□□□□ -0.99
CHFR-219ENST00000541341 EMC6Q9BV81 110 aa8.89□□□□□ -0.99
CHFR-219ENST00000541341 GPR61Q9BZJ8 451 aa8.89□□□□□ -0.99
CHFR-219ENST00000541341 SH3BGRL3Q9H299 93 aa8.89□□□□□ -0.99
CHFR-219ENST00000541341 ZNF442Q9H7R0 627 aa8.89□□□□□ -0.99
CHFR-219ENST00000541341 PLEK2Q9NYT0 353 aa8.89□□□□□ -0.99
CHFR-219ENST00000541341 ARHGAP21Q5T5U3 1957 aa8.88□□□□□ -0.99
CHFR-219ENST00000541341 POLQO75417 2590 aa8.88□□□□□ -0.99
CHFR-219ENST00000541341 TRBV6-6A0A0A6YYG2 114 aa8.88□□□□□ -0.99
CHFR-219ENST00000541341 FAM24AA6NFZ4 105 aa8.88□□□□□ -0.99
CHFR-219ENST00000541341 A8MWP6 167 aa8.88□□□□□ -0.99
CHFR-219ENST00000541341 F5H5K5 113 aa8.88□□□□□ -0.99
CHFR-219ENST00000541341 H0YL77 283 aa8.88□□□□□ -0.99
CHFR-219ENST00000541341 H3BML4 177 aa8.88□□□□□ -0.99
CHFR-219ENST00000541341 M0R143 59 aa8.88□□□□□ -0.99
CHFR-219ENST00000541341 SERPINE2P07093 398 aa8.88□□□□□ -0.99
CHFR-219ENST00000541341 FAHP16930 419 aa8.88□□□□□ -0.99
CHFR-219ENST00000541341 IL2RGP31785 369 aa8.88□□□□□ -0.99
CHFR-219ENST00000541341 MDH2P40926 338 aaKnown RBP8.88□□□□□ -0.99
CHFR-219ENST00000541341 DYNLT3P51808 116 aa8.88□□□□□ -0.99
CHFR-219ENST00000541341 RBM11P57052 281 aaKnown RBP8.88□□□□□ -0.99
CHFR-219ENST00000541341 RIPPLY3P57055 190 aa8.88□□□□□ -0.99
CHFR-219ENST00000541341 RAB11AP62491 216 aa8.88□□□□□ -0.99
CHFR-219ENST00000541341 OR1C1Q15619 314 aa8.88□□□□□ -0.99
CHFR-219ENST00000541341 COX19Q49B96 90 aa8.88□□□□□ -0.99
CHFR-219ENST00000541341 PHLDA2Q53GA4 152 aa8.88□□□□□ -0.99
CHFR-219ENST00000541341 SPIN3Q5JUX0 258 aa8.88□□□□□ -0.99
CHFR-219ENST00000541341 ZNF468Q5VIY5 522 aaPredicted RBP8.88□□□□□ -0.99
CHFR-219ENST00000541341 NCR3LG1Q68D85 454 aa8.88□□□□□ -0.99
CHFR-219ENST00000541341 MOB1BQ7L9L4 216 aa8.88□□□□□ -0.99
CHFR-219ENST00000541341 TCTEX1D1Q8N7M0 179 aa8.88□□□□□ -0.99
CHFR-219ENST00000541341 OR52M1Q8NGK5 317 aa8.88□□□□□ -0.99
CHFR-219ENST00000541341 TMEM170AQ8WVE7 144 aa8.88□□□□□ -0.99
CHFR-219ENST00000541341 ZNF524Q96C55 264 aa8.88□□□□□ -0.99
CHFR-219ENST00000541341 R3HDM4Q96D70 268 aa8.88□□□□□ -0.99
CHFR-219ENST00000541341 SGCZQ96LD1 299 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms