RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 PAX5Q02548 391 aa3.45□□□□□ -1.86
SNHG1-214ENST00000540865 SCN1BQ07699 218 aa3.45□□□□□ -1.86
SNHG1-214ENST00000540865 PDZK1IP1Q13113 114 aa3.45□□□□□ -1.86
SNHG1-214ENST00000540865 ATXN7L3Q14CW9 347 aaPredicted RBP3.45□□□□□ -1.86
SNHG1-214ENST00000540865 MMDQ15546 238 aa3.45□□□□□ -1.86
SNHG1-214ENST00000540865 LTC4SQ16873 150 aa3.45□□□□□ -1.86
SNHG1-214ENST00000540865 TATDN3Q17R31 274 aa3.45□□□□□ -1.86
SNHG1-214ENST00000540865 MOGAT2Q3SYC2 334 aa3.45□□□□□ -1.86
SNHG1-214ENST00000540865 C4orf46Q504U0 113 aa3.45□□□□□ -1.86
SNHG1-214ENST00000540865 FAM90A2PQ658T7 463 aa3.45□□□□□ -1.86
SNHG1-214ENST00000540865 ZNF660Q6AZW8 331 aaPredicted RBP3.45□□□□□ -1.86
SNHG1-214ENST00000540865 GLYATQ6IB77 296 aa3.45□□□□□ -1.86
SNHG1-214ENST00000540865 LIN54Q6MZP7 749 aa3.45□□□□□ -1.86
SNHG1-214ENST00000540865 C8orf82Q6P1X6 216 aaPredicted RBP3.45□□□□□ -1.86
SNHG1-214ENST00000540865 CD200R1LQ6Q8B3 271 aa3.45□□□□□ -1.86
SNHG1-214ENST00000540865 TMEM217Q8N7C4 229 aa3.45□□□□□ -1.86
SNHG1-214ENST00000540865 AQP11Q8NBQ7 271 aa3.45□□□□□ -1.86
SNHG1-214ENST00000540865 OR52M1Q8NGK5 317 aa3.45□□□□□ -1.86
SNHG1-214ENST00000540865 OR13A1Q8NGR1 328 aa3.45□□□□□ -1.86
SNHG1-214ENST00000540865 MRGPRDQ8TDS7 321 aa3.45□□□□□ -1.86
SNHG1-214ENST00000540865 PHLDA1Q8WV24 401 aaPredicted RBP3.45□□□□□ -1.86
SNHG1-214ENST00000540865 PP6455Q8WZ26 134 aa3.45□□□□□ -1.86
SNHG1-214ENST00000540865 DGCR6LQ9BY27 220 aa3.45□□□□□ -1.86
SNHG1-214ENST00000540865 BARHL1Q9BZE3 327 aa3.45□□□□□ -1.86
SNHG1-214ENST00000540865 SLA2Q9H6Q3 261 aa3.45□□□□□ -1.86
SNHG1-214ENST00000540865 TMBIM4Q9HC24 238 aa3.45□□□□□ -1.86
SNHG1-214ENST00000540865 SAR1AQ9NR31 198 aa3.45□□□□□ -1.86
SNHG1-214ENST00000540865 INTS9Q9NV88 658 aaKnown RBP3.45□□□□□ -1.86
SNHG1-214ENST00000540865 TAS2R1Q9NYW7 299 aa3.45□□□□□ -1.86
SNHG1-214ENST00000540865 KIF25Q9UIL4 384 aa3.45□□□□□ -1.86
SNHG1-214ENST00000540865 OR52A1Q9UKL2 312 aa3.45□□□□□ -1.86
SNHG1-214ENST00000540865 GTF2A1LQ9UNN4 478 aa3.45□□□□□ -1.86
SNHG1-214ENST00000540865 TP53TG1Q9Y2A0 90 aa3.45□□□□□ -1.86
SNHG1-214ENST00000540865 FBXO7Q9Y3I1 522 aa3.45□□□□□ -1.86
SNHG1-214ENST00000540865 SNX5Q9Y5X3 404 aa3.45□□□□□ -1.86
SNHG1-214ENST00000540865 R4GMQ9 66 aa3.45□□□□□ -1.86
SNHG1-214ENST00000540865 DSCAML1Q8TD84 2053 aa3.45□□□□□ -1.86
SNHG1-214ENST00000540865 IGKV1-12A0A0C4DH73 117 aa3.44□□□□□ -1.86
SNHG1-214ENST00000540865 PRR32B1ATL7 298 aa3.44□□□□□ -1.86
SNHG1-214ENST00000540865 OR11H12B2RN74 326 aa3.44□□□□□ -1.86
SNHG1-214ENST00000540865 MAGEB3O15480 346 aa3.44□□□□□ -1.86
SNHG1-214ENST00000540865 SYT7O43581 403 aa3.44□□□□□ -1.86
SNHG1-214ENST00000540865 AIREO43918 545 aa3.44□□□□□ -1.86
SNHG1-214ENST00000540865 EDF1O60869 148 aaKnown RBP3.44□□□□□ -1.86
SNHG1-214ENST00000540865 KDM4BO94953 1096 aa3.44□□□□□ -1.86
SNHG1-214ENST00000540865 IGKV1D-12P01611 117 aa3.44□□□□□ -1.86
SNHG1-214ENST00000540865 TFAP2AP05549 437 aa3.44□□□□□ -1.86
SNHG1-214ENST00000540865 CD7P09564 240 aa3.44□□□□□ -1.86
SNHG1-214ENST00000540865 SLC2A5P22732 501 aa3.44□□□□□ -1.86
SNHG1-214ENST00000540865 BMI1P35226 326 aa3.44□□□□□ -1.86
SNHG1-214ENST00000540865 SSTR5P35346 364 aa3.44□□□□□ -1.86
SNHG1-214ENST00000540865 KCNJ3P48549 501 aa3.44□□□□□ -1.86
SNHG1-214ENST00000540865 SYNJ2BPP57105 145 aa3.44□□□□□ -1.86
SNHG1-214ENST00000540865 TPPP2P59282 170 aa3.44□□□□□ -1.86
SNHG1-214ENST00000540865 ACTBP60709 375 aa3.44□□□□□ -1.86
SNHG1-214ENST00000540865 TMEM267Q0VDI3 215 aaPredicted RBP3.44□□□□□ -1.86
SNHG1-214ENST00000540865 ECSCRQ19T08 205 aa3.44□□□□□ -1.86
SNHG1-214ENST00000540865 C5orf64Q2M2E5 130 aa3.44□□□□□ -1.86
SNHG1-214ENST00000540865 Q3ZCU0 254 aa3.44□□□□□ -1.86
SNHG1-214ENST00000540865 AKIRIN2Q53H80 203 aa3.44□□□□□ -1.86
SNHG1-214ENST00000540865 PAN3Q58A45 887 aaKnown RBP3.44□□□□□ -1.86
SNHG1-214ENST00000540865 HACD2Q6Y1H2 254 aa3.44□□□□□ -1.86
SNHG1-214ENST00000540865 SLC25A48Q6ZT89 311 aaKnown RBP3.44□□□□□ -1.86
SNHG1-214ENST00000540865 LYG2Q86SG7 212 aa3.44□□□□□ -1.86
SNHG1-214ENST00000540865 CPOQ8IVL8 374 aa3.44□□□□□ -1.86
SNHG1-214ENST00000540865 SAXO1Q8IYX7 474 aa3.44□□□□□ -1.86
SNHG1-214ENST00000540865 NPBQ8NG41 125 aa3.44□□□□□ -1.86
SNHG1-214ENST00000540865 TEX47Q8TBZ9 253 aa3.44□□□□□ -1.86
SNHG1-214ENST00000540865 CASTOR1Q8WTX7 329 aa3.44□□□□□ -1.86
SNHG1-214ENST00000540865 TSEN15Q8WW01 171 aaKnown RBP3.44□□□□□ -1.86
SNHG1-214ENST00000540865 DYDC1Q8WWB3 177 aa3.44□□□□□ -1.86
SNHG1-214ENST00000540865 SPSB1Q96BD6 273 aa3.44□□□□□ -1.86
SNHG1-214ENST00000540865 ZNF251Q9BRH9 671 aa3.44□□□□□ -1.86
SNHG1-214ENST00000540865 GGTLC1Q9BX51 225 aa3.44□□□□□ -1.86
SNHG1-214ENST00000540865 ANKRD60Q9BZ19 345 aa3.44□□□□□ -1.86
SNHG1-214ENST00000540865 FAM118AQ9NWS6 357 aa3.44□□□□□ -1.86
SNHG1-214ENST00000540865 CNOT2Q9NZN8 540 aaKnown RBP3.44□□□□□ -1.86
SNHG1-214ENST00000540865 ABCD2Q9UBJ2 740 aa3.44□□□□□ -1.86
SNHG1-214ENST00000540865 IKZF2Q9UKS7 526 aa3.44□□□□□ -1.86
SNHG1-214ENST00000540865 RNF150Q9ULK6 438 aa3.44□□□□□ -1.86
SNHG1-214ENST00000540865 NUBP2Q9Y5Y2 271 aa3.44□□□□□ -1.86
SNHG1-214ENST00000540865 V9GYQ6 96 aa3.44□□□□□ -1.86
SNHG1-214ENST00000540865 SRRM2Q9UQ35 2752 aaKnown RBP3.43□□□□□ -1.86
SNHG1-214ENST00000540865 KIAA2026Q5HYC2 2103 aa3.43□□□□□ -1.86
SNHG1-214ENST00000540865 LOC102724200A0A096LPH7 203 aaPredicted RBP3.43□□□□□ -1.86
SNHG1-214ENST00000540865 TRAV24A0A0B4J272 114 aa3.43□□□□□ -1.86
SNHG1-214ENST00000540865 IGKV1-9A0A0C4DH69 117 aa3.43□□□□□ -1.86
SNHG1-214ENST00000540865 A0A0G2JLM5 398 aa3.43□□□□□ -1.86
SNHG1-214ENST00000540865 C13orf42A0A1B0GVH6 325 aa3.43□□□□□ -1.86
SNHG1-214ENST00000540865 MSGN1A6NI15 193 aa3.43□□□□□ -1.86
SNHG1-214ENST00000540865 H0YJX3 145 aa3.43□□□□□ -1.86
SNHG1-214ENST00000540865 H3BUA1 57 aa3.43□□□□□ -1.86
SNHG1-214ENST00000540865 SDCBPO00560 298 aaPredicted RBP3.43□□□□□ -1.86
SNHG1-214ENST00000540865 NBR2O15453 112 aa3.43□□□□□ -1.86
SNHG1-214ENST00000540865 LANCL1O43813 399 aa3.43□□□□□ -1.86
SNHG1-214ENST00000540865 OR2A4O95047 310 aa3.43□□□□□ -1.86
SNHG1-214ENST00000540865 NDUFA3O95167 84 aa3.43□□□□□ -1.86
SNHG1-214ENST00000540865 MT-ND2P03891 347 aa3.43□□□□□ -1.86
SNHG1-214ENST00000540865 TRGV3P03979 118 aa3.43□□□□□ -1.86
SNHG1-214ENST00000540865 HMGN1P05114 100 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms