RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 SCN3BQ9NY72 215 aa8.89□□□□□ -0.99
CLSTN3-209ENST00000539982 GNG12Q9UBI6 72 aa8.89□□□□□ -0.99
CLSTN3-209ENST00000539982 TPRKBQ9Y3C4 175 aa8.89□□□□□ -0.99
CLSTN3-209ENST00000539982 FBXO7Q9Y3I1 522 aa8.89□□□□□ -0.99
CLSTN3-209ENST00000539982 NUBP2Q9Y5Y2 271 aa8.89□□□□□ -0.99
CLSTN3-209ENST00000539982 DAPL1A0PJW8 107 aa8.88□□□□□ -0.99
CLSTN3-209ENST00000539982 J3QLW9 94 aa8.88□□□□□ -0.99
CLSTN3-209ENST00000539982 AIPO00170 330 aa8.88□□□□□ -0.99
CLSTN3-209ENST00000539982 GEMIN2O14893 280 aaKnown RBP8.88□□□□□ -0.99
CLSTN3-209ENST00000539982 SPINT2O43291 252 aa8.88□□□□□ -0.99
CLSTN3-209ENST00000539982 ZNF19P17023 458 aa8.88□□□□□ -0.99
CLSTN3-209ENST00000539982 RAB3AP20336 220 aa8.88□□□□□ -0.99
CLSTN3-209ENST00000539982 RBM11P57052 281 aaKnown RBP8.88□□□□□ -0.99
CLSTN3-209ENST00000539982 GABARAPL2P60520 117 aa8.88□□□□□ -0.99
CLSTN3-209ENST00000539982 TMEM267Q0VDI3 215 aaPredicted RBP8.88□□□□□ -0.99
CLSTN3-209ENST00000539982 ALKBH1Q13686 389 aaKnown RBP8.88□□□□□ -0.99
CLSTN3-209ENST00000539982 SMN1Q16637 294 aaKnown RBP8.88□□□□□ -0.99
CLSTN3-209ENST00000539982 ATAD3CQ5T2N8 411 aa8.88□□□□□ -0.99
CLSTN3-209ENST00000539982 ZNF529Q6P280 563 aa8.88□□□□□ -0.99
CLSTN3-209ENST00000539982 LINC00596Q86U02 117 aa8.88□□□□□ -0.99
CLSTN3-209ENST00000539982 GTSCR1Q86UQ5 136 aa8.88□□□□□ -0.99
CLSTN3-209ENST00000539982 OR10V1Q8NGI7 309 aa8.88□□□□□ -0.99
CLSTN3-209ENST00000539982 OR52N1Q8NH53 320 aa8.88□□□□□ -0.99
CLSTN3-209ENST00000539982 LINC00476Q8WZB0 136 aa8.88□□□□□ -0.99
CLSTN3-209ENST00000539982 PELI1Q96FA3 418 aa8.88□□□□□ -0.99
CLSTN3-209ENST00000539982 FAM192AQ9GZU8 254 aa8.88□□□□□ -0.99
CLSTN3-209ENST00000539982 RETNQ9HD89 108 aa8.88□□□□□ -0.99
CLSTN3-209ENST00000539982 PLCXD1Q9NUJ7 323 aa8.88□□□□□ -0.99
CLSTN3-209ENST00000539982 RNF150Q9ULK6 438 aa8.88□□□□□ -0.99
CLSTN3-209ENST00000539982 ING4Q9UNL4 249 aa8.88□□□□□ -0.99
CLSTN3-209ENST00000539982 SNTNA6NMZ2 147 aa8.87□□□□□ -0.99
CLSTN3-209ENST00000539982 J3QRE1 110 aa8.87□□□□□ -0.99
CLSTN3-209ENST00000539982 RGS11O94810 467 aa8.87□□□□□ -0.99
CLSTN3-209ENST00000539982 NDUFA3O95167 84 aa8.87□□□□□ -0.99
CLSTN3-209ENST00000539982 CDRT1O95170 752 aa8.87□□□□□ -0.99
CLSTN3-209ENST00000539982 SMIM18P0DKX4 95 aa8.87□□□□□ -0.99
CLSTN3-209ENST00000539982 EGR2P11161 476 aaPredicted RBP8.87□□□□□ -0.99
CLSTN3-209ENST00000539982 CX3CL1P78423 397 aa8.87□□□□□ -0.99
CLSTN3-209ENST00000539982 NDPQ00604 133 aa8.87□□□□□ -0.99
CLSTN3-209ENST00000539982 MPV17LQ2QL34 196 aa8.87□□□□□ -0.99
CLSTN3-209ENST00000539982 SYT6Q5T7P8 510 aaPredicted RBP8.87□□□□□ -0.99
CLSTN3-209ENST00000539982 CD200R1LQ6Q8B3 271 aa8.87□□□□□ -0.99
CLSTN3-209ENST00000539982 LINC00322Q6ZN03 302 aaPredicted RBP8.87□□□□□ -0.99
CLSTN3-209ENST00000539982 STX19Q8N4C7 294 aa8.87□□□□□ -0.99
CLSTN3-209ENST00000539982 TSPAN14Q8NG11 270 aa8.87□□□□□ -0.99
CLSTN3-209ENST00000539982 NEK7Q8TDX7 302 aa8.87□□□□□ -0.99
CLSTN3-209ENST00000539982 MS4A10Q96PG2 267 aa8.87□□□□□ -0.99
CLSTN3-209ENST00000539982 NABP2Q9BQ15 211 aa8.87□□□□□ -0.99
CLSTN3-209ENST00000539982 THAP7Q9BT49 309 aaPredicted RBP8.87□□□□□ -0.99
CLSTN3-209ENST00000539982 MRPS26Q9BYN8 205 aaKnown RBP8.87□□□□□ -0.99
CLSTN3-209ENST00000539982 METTL9Q9H1A3 318 aa8.87□□□□□ -0.99
CLSTN3-209ENST00000539982 RANGRFQ9HD47 186 aaPredicted RBP8.87□□□□□ -0.99
CLSTN3-209ENST00000539982 IL36GQ9NZH8 169 aa8.87□□□□□ -0.99
CLSTN3-209ENST00000539982 PSORS1C1Q9UIG5 152 aa8.87□□□□□ -0.99
CLSTN3-209ENST00000539982 TRAPPC2LQ9UL33 140 aa8.87□□□□□ -0.99
CLSTN3-209ENST00000539982 ALMS1Q8TCU4 4167 aa8.87□□□□□ -0.99
CLSTN3-209ENST00000539982 FRAS1Q86XX4 4008 aa8.87□□□□□ -0.99
CLSTN3-209ENST00000539982 PCLOQ9Y6V0 5065 aa8.86□□□□□ -0.99
CLSTN3-209ENST00000539982 A0A087WXM4 84 aa8.86□□□□□ -0.99
CLSTN3-209ENST00000539982 EFCAB10A6NFE3 127 aa8.86□□□□□ -0.99
CLSTN3-209ENST00000539982 PTGES3LE9PB15 166 aa8.86□□□□□ -0.99
CLSTN3-209ENST00000539982 MRPS14O60783 128 aaKnown RBP8.86□□□□□ -0.99
CLSTN3-209ENST00000539982 LY6G6CO95867 125 aa8.86□□□□□ -0.99
CLSTN3-209ENST00000539982 HBZP02008 142 aa8.86□□□□□ -0.99
CLSTN3-209ENST00000539982 ZP3P21754 424 aa8.86□□□□□ -0.99
CLSTN3-209ENST00000539982 CD40LGP29965 261 aa8.86□□□□□ -0.99
CLSTN3-209ENST00000539982 TPPP2P59282 170 aa8.86□□□□□ -0.99
CLSTN3-209ENST00000539982 KLF5Q13887 457 aaPredicted RBP8.86□□□□□ -0.99
CLSTN3-209ENST00000539982 MORN2Q502X0 79 aa8.86□□□□□ -0.99
CLSTN3-209ENST00000539982 AKIRIN2Q53H80 203 aa8.86□□□□□ -0.99
CLSTN3-209ENST00000539982 ACTBL2Q562R1 376 aa8.86□□□□□ -0.99
CLSTN3-209ENST00000539982 RNLSQ5VYX0 342 aa8.86□□□□□ -0.99
CLSTN3-209ENST00000539982 ZNF773Q6PK81 442 aa8.86□□□□□ -0.99
CLSTN3-209ENST00000539982 IL34Q6ZMJ4 242 aa8.86□□□□□ -0.99
CLSTN3-209ENST00000539982 ODF3L1Q8IXM7 274 aa8.86□□□□□ -0.99
CLSTN3-209ENST00000539982 PRR18Q8N4B5 295 aa8.86□□□□□ -0.99
CLSTN3-209ENST00000539982 OR51A2Q8NGJ7 313 aa8.86□□□□□ -0.99
CLSTN3-209ENST00000539982 OR1L1Q8NH94 360 aa8.86□□□□□ -0.99
CLSTN3-209ENST00000539982 GGHQ92820 318 aa8.86□□□□□ -0.99
CLSTN3-209ENST00000539982 C4orf36Q96KX1 117 aa8.86□□□□□ -0.99
CLSTN3-209ENST00000539982 FAM110AQ9BQ89 295 aa8.86□□□□□ -0.99
CLSTN3-209ENST00000539982 MRPL20Q9BYC9 149 aaKnown RBP8.86□□□□□ -0.99
CLSTN3-209ENST00000539982 DUSP21Q9H596 190 aa8.86□□□□□ -0.99
CLSTN3-209ENST00000539982 SLA2Q9H6Q3 261 aa8.86□□□□□ -0.99
CLSTN3-209ENST00000539982 CNOT2Q9NZN8 540 aaKnown RBP8.86□□□□□ -0.99
CLSTN3-209ENST00000539982 DHDHQ9UQ10 334 aa8.86□□□□□ -0.99
CLSTN3-209ENST00000539982 RPL36Q9Y3U8 105 aaKnown RBP8.86□□□□□ -0.99
CLSTN3-209ENST00000539982 CEPT1Q9Y6K0 416 aa8.86□□□□□ -0.99
CLSTN3-209ENST00000539982 A3GALT2U3KPV4 340 aa8.86□□□□□ -0.99
CLSTN3-209ENST00000539982 IRGMA1A4Y4 181 aa8.85□□□□□ -0.99
CLSTN3-209ENST00000539982 TMEM212A6NML5 194 aa8.85□□□□□ -0.99
CLSTN3-209ENST00000539982 FCN1O00602 326 aa8.85□□□□□ -0.99
CLSTN3-209ENST00000539982 C6orf183Q5T699 404 aa8.85□□□□□ -0.99
CLSTN3-209ENST00000539982 LCN12Q6JVE5 192 aa8.85□□□□□ -0.99
CLSTN3-209ENST00000539982 UNQ5815/PRO19632Q6UWF5 114 aa8.85□□□□□ -0.99
CLSTN3-209ENST00000539982 AHSA2Q719I0 299 aa8.85□□□□□ -0.99
CLSTN3-209ENST00000539982 PPP1R27Q86WC6 154 aa8.85□□□□□ -0.99
CLSTN3-209ENST00000539982 ACBD7Q8N6N7 88 aa8.85□□□□□ -0.99
CLSTN3-209ENST00000539982 OR9G4Q8NGQ1 327 aa8.85□□□□□ -0.99
CLSTN3-209ENST00000539982 OR4K15Q8NH41 348 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms