RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 EPG5Q9HCE0 2579 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 SCN10AQ9Y5Y9 1956 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 IGKV3D-20A0A0C4DH25 116 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 MDFIC2A0A1B0GVS7 189 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 A0A1B0GW15 77 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 FAM183AA6NL82 134 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 C8orf87E5RJ46 101 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 PGRMC1O00264 195 aaKnown RBP0.62□□□□□ -2.31
HIF1A-204ENST00000539097 LSM8O95777 96 aaKnown RBP0.62□□□□□ -2.31
HIF1A-204ENST00000539097 MBP02144 154 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 CD28P10747 220 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 UGT2B7P16662 529 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 CXCL5P42830 114 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 GCLMP48507 274 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 EMP1P54849 157 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 H2BFSP57053 126 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 FKBP1AP62942 108 aaKnown RBP0.62□□□□□ -2.31
HIF1A-204ENST00000539097 SLC35B1P78383 322 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 ELF3P78545 371 aaPredicted RBP0.62□□□□□ -2.31
HIF1A-204ENST00000539097 MLLT11Q13015 90 aaPredicted RBP0.62□□□□□ -2.31
HIF1A-204ENST00000539097 PTGES3Q15185 160 aaKnown RBP0.62□□□□□ -2.31
HIF1A-204ENST00000539097 GUSBP1Q15486 140 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 TBC1D28Q2M2D7 210 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 TEX30Q5JUR7 227 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 C9orf64Q5T6V5 341 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 FBXW9Q5XUX1 488 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 CD200R1LQ6Q8B3 271 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 AKAP14Q86UN6 197 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 DOLPP1Q86YN1 238 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 OR6N1Q8NGY5 312 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 OR4C6Q8NH72 309 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 OR5K1Q8NHB7 308 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 CIRBP-AS1Q8TBR5 109 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 RNASEH2CQ8TDP1 164 aaKnown RBP0.62□□□□□ -2.31
HIF1A-204ENST00000539097 LRRC29Q8WV35 223 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 PIH1D2Q8WWB5 315 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 ING5Q8WYH8 240 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 ZIM3Q96PE6 472 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 MGLLQ99685 303 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 TMED9Q9BVK6 235 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 SRRQ9GZT4 340 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 SPNS1Q9H2V7 528 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 MIXL1Q9H2W2 232 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 LRTM1Q9HBL6 345 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 SLC38A10Q9HBR0 1119 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 SLC40A1Q9NP59 571 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 TBX21Q9UL17 535 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 TONSLQ96HA7 1378 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 HELZP42694 1942 aaKnown RBP0.62□□□□□ -2.31
HIF1A-204ENST00000539097 DCHS1Q96JQ0 3298 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 USP54Q70EL1 1684 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 PAPPA2Q9BXP8 1791 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 UNC80Q8N2C7 3258 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 ZNF292O60281 2723 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 IGHV3OR16-8A0A075B7F1 116 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 A6NDX4 124 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP0.62□□□□□ -2.31
HIF1A-204ENST00000539097 FFAR1O14842 300 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 SLC16A4O15374 487 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 FKBP6O75344 327 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 IFNA5P01569 189 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 PCCAP05165 728 aaPredicted RBP0.62□□□□□ -2.31
HIF1A-204ENST00000539097 CD24P25063 80 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 ADORA1P30542 326 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 RBM34P42696 430 aaKnown RBP0.62□□□□□ -2.31
HIF1A-204ENST00000539097 GALR1P47211 349 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 AKR1C2P52895 323 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 CCL23P55773 120 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 RAB5BP61020 215 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 RELAQ04206 551 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 GLO1Q04760 184 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 ZBED5Q49AG3 693 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 TTMPQ5BVD1 217 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 KHDRBS2Q5VWX1 349 aaKnown RBP0.62□□□□□ -2.31
HIF1A-204ENST00000539097 KRTAP5-7Q6L8G8 165 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 Q6P435 159 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 TTC33Q6PID6 262 aaPredicted RBP0.62□□□□□ -2.31
HIF1A-204ENST00000539097 LYZL2Q7Z4W2 148 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 ORMDL3Q8N138 153 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 Q8N9W7 124 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 OR2M7Q8NG81 312 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 OR4C13Q8NGP0 309 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 TLCD1Q96CP7 247 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 CMTM5Q96DZ9 223 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 SMIM19Q96E16 107 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 OR52E6Q96RD3 313 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 RNF5Q99942 180 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 DNAJC27Q9NZQ0 273 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 TAC3Q9UHF0 121 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 PRO0628Q9UI54 55 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 ZNF230Q9UIE0 474 aaPredicted RBP0.62□□□□□ -2.31
HIF1A-204ENST00000539097 ERVK-7P63135 1459 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 TOPAZ1Q8N9V7 1692 aa0.62□□□□□ -2.31
HIF1A-204ENST00000539097 PRR14LQ5THK1 2151 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 ELP1O95163 1332 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 MAP2P11137 1827 aaKnown RBP0.61□□□□□ -2.31
HIF1A-204ENST00000539097 ZNF831Q5JPB2 1677 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 ADGRL2O95490 1459 aa0.61□□□□□ -2.31
HIF1A-204ENST00000539097 COL1A1P02452 1464 aaPredicted RBP0.61□□□□□ -2.31
HIF1A-204ENST00000539097 IGHV6-1A0A0B4J1U7 121 aa0.61□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms