RNA–Protein interactions for RNA: ENST00000537490.1

USP28-203, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 567 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-203ENST00000537490 OR51J1Q9H342 316 aa6.58□□□□□ -1.36
USP28-203ENST00000537490 KCNIP1Q9NZI2 227 aa6.58□□□□□ -1.36
USP28-203ENST00000537490 JPT1Q9UK76 154 aa6.58□□□□□ -1.36
USP28-203ENST00000537490 U3KQK5 164 aa6.58□□□□□ -1.36
USP28-203ENST00000537490 EFCAB10A6NFE3 127 aa6.57□□□□□ -1.36
USP28-203ENST00000537490 I3L521 148 aa6.57□□□□□ -1.36
USP28-203ENST00000537490 ATP6V0E1O15342 81 aa6.57□□□□□ -1.36
USP28-203ENST00000537490 IGLV1-40P01703 118 aa6.57□□□□□ -1.36
USP28-203ENST00000537490 HLA-DRB1P01911 266 aa6.57□□□□□ -1.36
USP28-203ENST00000537490 CD1AP06126 327 aa6.57□□□□□ -1.36
USP28-203ENST00000537490 RAB9AP51151 201 aa6.57□□□□□ -1.36
USP28-203ENST00000537490 TAS2R43P59537 309 aa6.57□□□□□ -1.36
USP28-203ENST00000537490 GNB1P62873 340 aa6.57□□□□□ -1.36
USP28-203ENST00000537490 HTD2P86397 168 aa6.57□□□□□ -1.36
USP28-203ENST00000537490 INSL4Q14641 139 aa6.57□□□□□ -1.36
USP28-203ENST00000537490 C6orf141Q5SZD1 244 aa6.57□□□□□ -1.36
USP28-203ENST00000537490 OR10K2Q6IF99 312 aa6.57□□□□□ -1.36
USP28-203ENST00000537490 LIN54Q6MZP7 749 aa6.57□□□□□ -1.36
USP28-203ENST00000537490 ZNF833PQ6ZTB9 187 aa6.57□□□□□ -1.36
USP28-203ENST00000537490 ZNF554Q86TJ5 538 aa6.57□□□□□ -1.36
USP28-203ENST00000537490 DHRSXQ8N5I4 330 aa6.57□□□□□ -1.36
USP28-203ENST00000537490 SETD9Q8NE22 299 aa6.57□□□□□ -1.36
USP28-203ENST00000537490 NPBQ8NG41 125 aa6.57□□□□□ -1.36
USP28-203ENST00000537490 UBE2E2Q96LR5 201 aa6.57□□□□□ -1.36
USP28-203ENST00000537490 SULT4A1Q9BR01 284 aa6.57□□□□□ -1.36
USP28-203ENST00000537490 ZNF251Q9BRH9 671 aa6.57□□□□□ -1.36
USP28-203ENST00000537490 CHCHD6Q9BRQ6 235 aa6.57□□□□□ -1.36
USP28-203ENST00000537490 PARP11Q9NR21 331 aa6.57□□□□□ -1.36
USP28-203ENST00000537490 VSIG4Q9Y279 399 aa6.57□□□□□ -1.36
USP28-203ENST00000537490 ZNF256Q9Y2P7 627 aaPredicted RBP6.57□□□□□ -1.36
USP28-203ENST00000537490 SAA2-SAA4A0A096LPE2 208 aa6.56□□□□□ -1.36
USP28-203ENST00000537490 TRAV41A0A0B4J266 112 aa6.56□□□□□ -1.36
USP28-203ENST00000537490 NBR2O15453 112 aa6.56□□□□□ -1.36
USP28-203ENST00000537490 SOX15O60248 233 aa6.56□□□□□ -1.36
USP28-203ENST00000537490 GNAO1P09471 354 aa6.56□□□□□ -1.36
USP28-203ENST00000537490 SAA2P0DJI9 122 aaPredicted RBP6.56□□□□□ -1.36
USP28-203ENST00000537490 CHATP28329 748 aa6.56□□□□□ -1.36
USP28-203ENST00000537490 BLVRBP30043 206 aaPredicted RBP6.56□□□□□ -1.36
USP28-203ENST00000537490 WNT4P56705 351 aa6.56□□□□□ -1.36
USP28-203ENST00000537490 NDPQ00604 133 aa6.56□□□□□ -1.36
USP28-203ENST00000537490 RUNX1Q01196 453 aa6.56□□□□□ -1.36
USP28-203ENST00000537490 ZNF616Q08AN1 781 aa6.56□□□□□ -1.36
USP28-203ENST00000537490 HMGN3Q15651 99 aa6.56□□□□□ -1.36
USP28-203ENST00000537490 C5orf64Q2M2E5 130 aa6.56□□□□□ -1.36
USP28-203ENST00000537490 LY6G6FQ5SQ64 297 aa6.56□□□□□ -1.36
USP28-203ENST00000537490 FAM27D1Q5T7N8 215 aa6.56□□□□□ -1.36
USP28-203ENST00000537490 TMEM65Q6PI78 240 aa6.56□□□□□ -1.36
USP28-203ENST00000537490 AHSA2Q719I0 299 aa6.56□□□□□ -1.36
USP28-203ENST00000537490 C6orf201Q7Z4U5 140 aa6.56□□□□□ -1.36
USP28-203ENST00000537490 NANOGP1Q8N7R0 232 aa6.56□□□□□ -1.36
USP28-203ENST00000537490 NKAIN3Q8N8D7 197 aa6.56□□□□□ -1.36
USP28-203ENST00000537490 MINDY2Q8NBR6 621 aa6.56□□□□□ -1.36
USP28-203ENST00000537490 DCUN1D4Q92564 292 aa6.56□□□□□ -1.36
USP28-203ENST00000537490 GALMQ96C23 342 aa6.56□□□□□ -1.36
USP28-203ENST00000537490 UQCC2Q9BRT2 126 aa6.56□□□□□ -1.36
USP28-203ENST00000537490 FAAP24Q9BTP7 215 aa6.56□□□□□ -1.36
USP28-203ENST00000537490 ALX4Q9H161 411 aaPredicted RBP6.56□□□□□ -1.36
USP28-203ENST00000537490 IFI27L2Q9H2X8 130 aa6.56□□□□□ -1.36
USP28-203ENST00000537490 KCNK15Q9H427 330 aa6.56□□□□□ -1.36
USP28-203ENST00000537490 CNOT2Q9NZN8 540 aaKnown RBP6.56□□□□□ -1.36
USP28-203ENST00000537490 GHRLQ9UBU3 117 aa6.56□□□□□ -1.36
USP28-203ENST00000537490 PSORS1C1Q9UIG5 152 aa6.56□□□□□ -1.36
USP28-203ENST00000537490 FBXO7Q9Y3I1 522 aa6.56□□□□□ -1.36
USP28-203ENST00000537490 KMT2CQ8NEZ4 4911 aaKnown RBP6.55□□□□□ -1.36
USP28-203ENST00000537490 EBAG9O00559 213 aa6.55□□□□□ -1.36
USP28-203ENST00000537490 FCN1O00602 326 aa6.55□□□□□ -1.36
USP28-203ENST00000537490 MYL12BO14950 172 aa6.55□□□□□ -1.36
USP28-203ENST00000537490 ST8SIA5O15466 376 aa6.55□□□□□ -1.36
USP28-203ENST00000537490 RGS11O94810 467 aa6.55□□□□□ -1.36
USP28-203ENST00000537490 NDUFA3O95167 84 aa6.55□□□□□ -1.36
USP28-203ENST00000537490 LY86O95711 162 aa6.55□□□□□ -1.36
USP28-203ENST00000537490 OR8U8P0C7N1 319 aa6.55□□□□□ -1.36
USP28-203ENST00000537490 CT45A6P0DMU7 189 aa6.55□□□□□ -1.36
USP28-203ENST00000537490 CT45A5P0DMU8 189 aa6.55□□□□□ -1.36
USP28-203ENST00000537490 CT45A7P0DMV0 189 aa6.55□□□□□ -1.36
USP28-203ENST00000537490 EGR2P11161 476 aaPredicted RBP6.55□□□□□ -1.36
USP28-203ENST00000537490 HTR2CP28335 458 aa6.55□□□□□ -1.36
USP28-203ENST00000537490 INSL3P51460 131 aa6.55□□□□□ -1.36
USP28-203ENST00000537490 RPS27AP62979 156 aaKnown RBP6.55□□□□□ -1.36
USP28-203ENST00000537490 CX3CL1P78423 397 aa6.55□□□□□ -1.36
USP28-203ENST00000537490 ACSM3Q53FZ2 586 aa6.55□□□□□ -1.36
USP28-203ENST00000537490 RPL39P5Q59GN2 51 aa6.55□□□□□ -1.36
USP28-203ENST00000537490 C19orf54Q5BKX5 351 aa6.55□□□□□ -1.36
USP28-203ENST00000537490 C1orf100Q5SVJ3 147 aa6.55□□□□□ -1.36
USP28-203ENST00000537490 GLDNQ6ZMI3 551 aaPredicted RBP6.55□□□□□ -1.36
USP28-203ENST00000537490 LRRTM1Q86UE6 522 aa6.55□□□□□ -1.36
USP28-203ENST00000537490 PACRGLQ8N7B6 248 aa6.55□□□□□ -1.36
USP28-203ENST00000537490 BPIFB6Q8NFQ5 453 aa6.55□□□□□ -1.36
USP28-203ENST00000537490 CASTOR1Q8WTX7 329 aa6.55□□□□□ -1.36
USP28-203ENST00000537490 FBLIM1Q8WUP2 373 aa6.55□□□□□ -1.36
USP28-203ENST00000537490 IL1F10Q8WWZ1 152 aa6.55□□□□□ -1.36
USP28-203ENST00000537490 DLX4Q92988 240 aaPredicted RBP6.55□□□□□ -1.36
USP28-203ENST00000537490 NEDD4LQ96PU5 975 aa6.55□□□□□ -1.36
USP28-203ENST00000537490 NICN1Q9BSH3 213 aa6.55□□□□□ -1.36
USP28-203ENST00000537490 PARP12Q9H0J9 701 aaKnown RBP6.55□□□□□ -1.36
USP28-203ENST00000537490 CST11Q9H112 138 aa6.55□□□□□ -1.36
USP28-203ENST00000537490 FBXL15Q9H469 300 aa6.55□□□□□ -1.36
USP28-203ENST00000537490 TPSG1Q9NRR2 321 aa6.55□□□□□ -1.36
USP28-203ENST00000537490 PLCXD1Q9NUJ7 323 aa6.55□□□□□ -1.36
USP28-203ENST00000537490 LRRC42Q9Y546 428 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms