RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 Q8WTZ3 238 aa12.1□□□□□ -0.47
USP44-203ENST00000537435 FER1L6-AS2Q96M78 137 aa12.1□□□□□ -0.47
USP44-203ENST00000537435 ZNF251Q9BRH9 671 aa12.1□□□□□ -0.47
USP44-203ENST00000537435 ZNF665Q9H7R5 613 aa12.1□□□□□ -0.47
USP44-203ENST00000537435 NIT2Q9NQR4 276 aa12.1□□□□□ -0.47
USP44-203ENST00000537435 MBNL3Q9NUK0 354 aaKnown RBP12.1□□□□□ -0.47
USP44-203ENST00000537435 ARHGAP21Q5T5U3 1957 aa12.1□□□□□ -0.47
USP44-203ENST00000537435 MED12LQ86YW9 2145 aa12.09□□□□□ -0.47
USP44-203ENST00000537435 TRGV5A0A0B4J1U4 118 aa12.09□□□□□ -0.47
USP44-203ENST00000537435 ZFP92A6NM28 416 aa12.09□□□□□ -0.47
USP44-203ENST00000537435 CXCL1P09341 107 aa12.09□□□□□ -0.47
USP44-203ENST00000537435 PGA5P0DJD9 388 aa12.09□□□□□ -0.47
USP44-203ENST00000537435 CD46P15529 392 aa12.09□□□□□ -0.47
USP44-203ENST00000537435 EIF2S3P41091 472 aaKnown RBP12.09□□□□□ -0.47
USP44-203ENST00000537435 CD200P41217 278 aa12.09□□□□□ -0.47
USP44-203ENST00000537435 IDH3GP51553 393 aaPredicted RBP12.09□□□□□ -0.47
USP44-203ENST00000537435 KIAA0141Q14154 515 aaPredicted RBP12.09□□□□□ -0.47
USP44-203ENST00000537435 ZNF726P1Q15940 193 aa12.09□□□□□ -0.47
USP44-203ENST00000537435 RNFT1Q5M7Z0 435 aa12.09□□□□□ -0.47
USP44-203ENST00000537435 SPANXN5Q5MJ07 72 aa12.09□□□□□ -0.47
USP44-203ENST00000537435 SLC35E3Q7Z769 313 aa12.09□□□□□ -0.47
USP44-203ENST00000537435 LILRB2Q8N423 598 aa12.09□□□□□ -0.47
USP44-203ENST00000537435 TMEM9BQ9NQ34 198 aa12.09□□□□□ -0.47
USP44-203ENST00000537435 WIPI2Q9Y4P8 454 aa12.09□□□□□ -0.47
USP44-203ENST00000537435 SH2D1BO14796 132 aa12.09□□□□□ -0.47
USP44-203ENST00000537435 TECTAO75443 2155 aa12.09□□□□□ -0.47
USP44-203ENST00000537435 CD59P13987 128 aa12.09□□□□□ -0.47
USP44-203ENST00000537435 ERVFRD-1P60508 538 aa12.09□□□□□ -0.47
USP44-203ENST00000537435 RAB11AP62491 216 aa12.09□□□□□ -0.47
USP44-203ENST00000537435 HBG1P69891 147 aa12.09□□□□□ -0.47
USP44-203ENST00000537435 HBG2P69892 147 aa12.09□□□□□ -0.47
USP44-203ENST00000537435 MRPL49Q13405 166 aaKnown RBP12.09□□□□□ -0.47
USP44-203ENST00000537435 ZNF146Q15072 292 aa12.09□□□□□ -0.47
USP44-203ENST00000537435 LRRC75BQ2VPJ9 315 aa12.09□□□□□ -0.47
USP44-203ENST00000537435 ATP1A1-AS1Q5TC04 95 aa12.09□□□□□ -0.47
USP44-203ENST00000537435 PSMG3Q9BT73 122 aaPredicted RBP12.09□□□□□ -0.47
USP44-203ENST00000537435 CDH20Q9HBT6 801 aa12.09□□□□□ -0.47
USP44-203ENST00000537435 GPR179Q6PRD1 2367 aa12.08□□□□□ -0.48
USP44-203ENST00000537435 J3QW42 95 aa12.08□□□□□ -0.48
USP44-203ENST00000537435 GRPP07492 148 aa12.08□□□□□ -0.48
USP44-203ENST00000537435 SELEP16581 610 aa12.08□□□□□ -0.48
USP44-203ENST00000537435 CEBPDP49716 269 aaPredicted RBP12.08□□□□□ -0.48
USP44-203ENST00000537435 FGF8P55075 233 aaPredicted RBP12.08□□□□□ -0.48
USP44-203ENST00000537435 FAM90A2PQ658T7 463 aa12.08□□□□□ -0.48
USP44-203ENST00000537435 SSX7Q7RTT5 188 aa12.08□□□□□ -0.48
USP44-203ENST00000537435 FGFRL1Q8N441 504 aa12.08□□□□□ -0.48
USP44-203ENST00000537435 OR10G4Q8NGN3 311 aa12.08□□□□□ -0.48
USP44-203ENST00000537435 SLC25A40Q8TBP6 338 aa12.08□□□□□ -0.48
USP44-203ENST00000537435 CISD1Q9NZ45 108 aaKnown RBP12.08□□□□□ -0.48
USP44-203ENST00000537435 KNTC1P50748 2209 aa12.08□□□□□ -0.48
USP44-203ENST00000537435 TNFSF15O95150 251 aa12.08□□□□□ -0.48
USP44-203ENST00000537435 BCL2P10415 239 aa12.08□□□□□ -0.48
USP44-203ENST00000537435 UBE2NP61088 152 aaKnown RBP12.08□□□□□ -0.48
USP44-203ENST00000537435 ZNF674Q2M3X9 581 aa12.08□□□□□ -0.48
USP44-203ENST00000537435 MBD3L1Q8WWY6 194 aa12.08□□□□□ -0.48
USP44-203ENST00000537435 SIRT7Q9NRC8 400 aa12.08□□□□□ -0.48
USP44-203ENST00000537435 RNF150Q9ULK6 438 aa12.08□□□□□ -0.48
USP44-203ENST00000537435 FABP1P07148 127 aa12.07□□□□□ -0.48
USP44-203ENST00000537435 GLIPR1P48060 266 aa12.07□□□□□ -0.48
USP44-203ENST00000537435 DHRS13Q6UX07 377 aa12.07□□□□□ -0.48
USP44-203ENST00000537435 RCC1LQ96I51 464 aaKnown RBP12.07□□□□□ -0.48
USP44-203ENST00000537435 WDR61Q9GZS3 305 aaKnown RBP12.07□□□□□ -0.48
USP44-203ENST00000537435 TGIF2-C20orf24A0A0A6YYL0 155 aa12.06□□□□□ -0.48
USP44-203ENST00000537435 CXorf65A6NEN9 183 aa12.06□□□□□ -0.48
USP44-203ENST00000537435 PPIHO43447 177 aaKnown RBP12.06□□□□□ -0.48
USP44-203ENST00000537435 PSPNO60542 156 aa12.06□□□□□ -0.48
USP44-203ENST00000537435 HAND1O96004 215 aa12.06□□□□□ -0.48
USP44-203ENST00000537435 IGHV1-2P23083 117 aa12.06□□□□□ -0.48
USP44-203ENST00000537435 ARG2P78540 354 aa12.06□□□□□ -0.48
USP44-203ENST00000537435 SERF2P84101 59 aa12.06□□□□□ -0.48
USP44-203ENST00000537435 ZNF766Q5HY98 468 aa12.06□□□□□ -0.48
USP44-203ENST00000537435 FAM180AQ6UWF9 173 aa12.06□□□□□ -0.48
USP44-203ENST00000537435 OR4C12Q96R67 309 aa12.06□□□□□ -0.48
USP44-203ENST00000537435 GSN-AS1Q9NRJ2 163 aa12.06□□□□□ -0.48
USP44-203ENST00000537435 LYZL6O75951 148 aa12.06□□□□□ -0.48
USP44-203ENST00000537435 ELLP55199 621 aaPredicted RBP12.06□□□□□ -0.48
USP44-203ENST00000537435 PSG7Q13046 419 aa12.06□□□□□ -0.48
USP44-203ENST00000537435 OR1L1Q8NH94 360 aa12.06□□□□□ -0.48
USP44-203ENST00000537435 TMPRSS5Q9H3S3 457 aa12.06□□□□□ -0.48
USP44-203ENST00000537435 UBE2L5PA0A1B0GUS4 154 aa12.05□□□□□ -0.48
USP44-203ENST00000537435 RNF212BA8MTL3 300 aa12.05□□□□□ -0.48
USP44-203ENST00000537435 IQCF6A8MYZ5 107 aa12.05□□□□□ -0.48
USP44-203ENST00000537435 LINC00587B1AMM8 73 aa12.05□□□□□ -0.48
USP44-203ENST00000537435 YIF1AO95070 293 aa12.05□□□□□ -0.48
USP44-203ENST00000537435 RAC2P15153 192 aa12.05□□□□□ -0.48
USP44-203ENST00000537435 OR3A1P47881 315 aa12.05□□□□□ -0.48
USP44-203ENST00000537435 TMEM41BQ5BJD5 291 aa12.05□□□□□ -0.48
USP44-203ENST00000537435 GCNT2Q8N0V5 402 aa12.05□□□□□ -0.48
USP44-203ENST00000537435 GMPPAQ96IJ6 420 aaPredicted RBP12.05□□□□□ -0.48
USP44-203ENST00000537435 KCNIP1Q9NZI2 227 aa12.05□□□□□ -0.48
USP44-203ENST00000537435 FAM90A26D6RGX4 464 aa12.05□□□□□ -0.48
USP44-203ENST00000537435 CDX4O14627 284 aaPredicted RBP12.05□□□□□ -0.48
USP44-203ENST00000537435 RAMP3O60896 148 aa12.05□□□□□ -0.48
USP44-203ENST00000537435 CLDN1O95832 211 aa12.05□□□□□ -0.48
USP44-203ENST00000537435 HOXA5P20719 270 aa12.05□□□□□ -0.48
USP44-203ENST00000537435 NDUFA6P56556 154 aa12.05□□□□□ -0.48
USP44-203ENST00000537435 TGFBR3Q03167 851 aa12.05□□□□□ -0.48
USP44-203ENST00000537435 SLC38A11Q08AI6 406 aa12.05□□□□□ -0.48
USP44-203ENST00000537435 OR2B11Q5JQS5 317 aa12.05□□□□□ -0.48
USP44-203ENST00000537435 OR8G2PQ6IF36 304 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms