RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 OR10A3P58181 314 aa13.64□□□□□ -0.23
SFSWAP-205ENST00000537164 HIST2H2BDQ6DRA6 164 aa13.64□□□□□ -0.23
SFSWAP-205ENST00000537164 ZNF773Q6PK81 442 aa13.64□□□□□ -0.23
SFSWAP-205ENST00000537164 FAM110DQ8TAY7 271 aaPredicted RBP13.64□□□□□ -0.23
SFSWAP-205ENST00000537164 PECRQ9BY49 303 aa13.64□□□□□ -0.23
SFSWAP-205ENST00000537164 PLSCR3Q9NRY6 295 aa13.64□□□□□ -0.23
SFSWAP-205ENST00000537164 ABRACLQ9P1F3 81 aa13.64□□□□□ -0.23
SFSWAP-205ENST00000537164 AK3Q9UIJ7 227 aa13.64□□□□□ -0.23
SFSWAP-205ENST00000537164 IGHV3-72A0A0B4J1Y9 119 aa13.63□□□□□ -0.23
SFSWAP-205ENST00000537164 SH2D7A6NKC9 451 aaPredicted RBP13.63□□□□□ -0.23
SFSWAP-205ENST00000537164 ITGB1BP1O14713 200 aa13.63□□□□□ -0.23
SFSWAP-205ENST00000537164 IGHG2P01859 326 aa13.63□□□□□ -0.23
SFSWAP-205ENST00000537164 RAB6AP20340 208 aa13.63□□□□□ -0.23
SFSWAP-205ENST00000537164 HNF4GQ14541 408 aa13.63□□□□□ -0.23
SFSWAP-205ENST00000537164 TCTEX1D4Q5JR98 221 aa13.63□□□□□ -0.23
SFSWAP-205ENST00000537164 PLAC9Q5JTB6 97 aa13.63□□□□□ -0.23
SFSWAP-205ENST00000537164 HES5Q5TA89 166 aa13.63□□□□□ -0.23
SFSWAP-205ENST00000537164 C22orf42Q6IC83 251 aa13.63□□□□□ -0.23
SFSWAP-205ENST00000537164 CENPVQ7Z7K6 275 aaPredicted RBP13.63□□□□□ -0.23
SFSWAP-205ENST00000537164 NR2C2APQ86WQ0 139 aa13.63□□□□□ -0.23
SFSWAP-205ENST00000537164 OR8H1Q8NGG4 311 aa13.63□□□□□ -0.23
SFSWAP-205ENST00000537164 PTX4Q96A99 478 aa13.63□□□□□ -0.23
SFSWAP-205ENST00000537164 ARHGAP5-AS1Q96IT6 56 aa13.63□□□□□ -0.23
SFSWAP-205ENST00000537164 C12orf4Q9NQ89 552 aa13.63□□□□□ -0.23
SFSWAP-205ENST00000537164 TXNL4BQ9NX01 149 aaKnown RBP13.63□□□□□ -0.23
SFSWAP-205ENST00000537164 MOSP00540 346 aa13.62□□□□□ -0.23
SFSWAP-205ENST00000537164 PSMB9P28065 219 aa13.62□□□□□ -0.23
SFSWAP-205ENST00000537164 PLA2G7Q13093 441 aa13.62□□□□□ -0.23
SFSWAP-205ENST00000537164 KCTD21Q4G0X4 260 aa13.62□□□□□ -0.23
SFSWAP-205ENST00000537164 ZNF833PQ6ZTB9 187 aa13.62□□□□□ -0.23
SFSWAP-205ENST00000537164 LYG1Q8N1E2 194 aa13.62□□□□□ -0.23
SFSWAP-205ENST00000537164 Q8N9W7 124 aa13.62□□□□□ -0.23
SFSWAP-205ENST00000537164 HDHD3Q9BSH5 251 aaPredicted RBP13.62□□□□□ -0.23
SFSWAP-205ENST00000537164 CHMP1AQ9HD42 196 aaPredicted RBP13.62□□□□□ -0.23
SFSWAP-205ENST00000537164 Q9N2K0 584 aa13.62□□□□□ -0.23
SFSWAP-205ENST00000537164 LIN7CQ9NUP9 197 aaKnown RBP13.62□□□□□ -0.23
SFSWAP-205ENST00000537164 STUB1Q9UNE7 303 aa13.62□□□□□ -0.23
SFSWAP-205ENST00000537164 KCNK7Q9Y2U2 307 aa13.62□□□□□ -0.23
SFSWAP-205ENST00000537164 TGP01266 2768 aa13.61□□□□□ -0.23
SFSWAP-205ENST00000537164 ZNF736B4DX44 427 aaPredicted RBP13.61□□□□□ -0.23
SFSWAP-205ENST00000537164 LSAMPQ13449 338 aa13.61□□□□□ -0.23
SFSWAP-205ENST00000537164 NSUN5P1Q3KNT7 163 aa13.61□□□□□ -0.23
SFSWAP-205ENST00000537164 C9orf152Q5JTZ5 239 aa13.61□□□□□ -0.23
SFSWAP-205ENST00000537164 FAM71F2Q6NXP2 309 aa13.61□□□□□ -0.23
SFSWAP-205ENST00000537164 TPRA1Q86W33 373 aa13.61□□□□□ -0.23
SFSWAP-205ENST00000537164 FAM71E2Q8N5Q1 922 aa13.61□□□□□ -0.23
SFSWAP-205ENST00000537164 OR2AK2Q8NG84 335 aa13.61□□□□□ -0.23
SFSWAP-205ENST00000537164 OR4F17Q8NGA8 305 aa13.61□□□□□ -0.23
SFSWAP-205ENST00000537164 OR4F4Q96R69 305 aa13.61□□□□□ -0.23
SFSWAP-205ENST00000537164 AGMATQ9BSE5 352 aa13.61□□□□□ -0.23
SFSWAP-205ENST00000537164 ABCG5Q9H222 651 aa13.61□□□□□ -0.23
SFSWAP-205ENST00000537164 IFI27L2Q9H2X8 130 aa13.61□□□□□ -0.23
SFSWAP-205ENST00000537164 GHITMQ9H3K2 345 aa13.61□□□□□ -0.23
SFSWAP-205ENST00000537164 RAB27BO00194 218 aa13.6□□□□□ -0.23
SFSWAP-205ENST00000537164 HLA-DRB3P79483 266 aa13.6□□□□□ -0.23
SFSWAP-205ENST00000537164 OR4X2Q8NGF9 303 aa13.6□□□□□ -0.23
SFSWAP-205ENST00000537164 CHPT1Q8WUD6 406 aa13.6□□□□□ -0.23
SFSWAP-205ENST00000537164 IL1F10Q8WWZ1 152 aa13.6□□□□□ -0.23
SFSWAP-205ENST00000537164 NABP2Q9BQ15 211 aa13.6□□□□□ -0.23
SFSWAP-205ENST00000537164 CMSS1Q9BQ75 279 aaKnown RBP13.6□□□□□ -0.23
SFSWAP-205ENST00000537164 ZNF251Q9BRH9 671 aa13.6□□□□□ -0.23
SFSWAP-205ENST00000537164 PIPOXQ9P0Z9 390 aa13.6□□□□□ -0.23
SFSWAP-205ENST00000537164 SLC23A1Q9UHI7 598 aa13.6□□□□□ -0.23
SFSWAP-205ENST00000537164 SAA2-SAA4A0A096LPE2 208 aa13.59□□□□□ -0.23
SFSWAP-205ENST00000537164 NCBP2LA6PVI3 153 aaKnown RBP13.59□□□□□ -0.23
SFSWAP-205ENST00000537164 NOTOA8MTQ0 251 aa13.59□□□□□ -0.23
SFSWAP-205ENST00000537164 WIPF1O43516 503 aa13.59□□□□□ -0.23
SFSWAP-205ENST00000537164 SAA2P0DJI9 122 aaPredicted RBP13.59□□□□□ -0.23
SFSWAP-205ENST00000537164 ZBTB25P24278 435 aa13.59□□□□□ -0.23
SFSWAP-205ENST00000537164 DEFA6Q01524 100 aa13.59□□□□□ -0.23
SFSWAP-205ENST00000537164 MOGAT2Q3SYC2 334 aa13.59□□□□□ -0.23
SFSWAP-205ENST00000537164 C10orf99Q6UWK7 81 aa13.59□□□□□ -0.23
SFSWAP-205ENST00000537164 OR10R2Q8NGX6 335 aa13.59□□□□□ -0.23
SFSWAP-205ENST00000537164 SETD6Q8TBK2 473 aa13.59□□□□□ -0.23
SFSWAP-205ENST00000537164 RAB3CQ96E17 227 aa13.59□□□□□ -0.23
SFSWAP-205ENST00000537164 S1PR3Q99500 378 aa13.59□□□□□ -0.23
SFSWAP-205ENST00000537164 TOLLIPQ9H0E2 274 aa13.59□□□□□ -0.23
SFSWAP-205ENST00000537164 SSR3Q9UNL2 185 aa13.59□□□□□ -0.23
SFSWAP-205ENST00000537164 TSSC4Q9Y5U2 329 aaPredicted RBP13.59□□□□□ -0.23
SFSWAP-205ENST00000537164 NOTCH3Q9UM47 2321 aa13.59□□□□□ -0.23
SFSWAP-205ENST00000537164 PSMB11A5LHX3 300 aa13.58□□□□□ -0.24
SFSWAP-205ENST00000537164 MFNGO00587 321 aa13.58□□□□□ -0.24
SFSWAP-205ENST00000537164 RAB29O14966 203 aa13.58□□□□□ -0.24
SFSWAP-205ENST00000537164 KCNAB3O43448 404 aa13.58□□□□□ -0.24
SFSWAP-205ENST00000537164 GADD45AP24522 165 aa13.58□□□□□ -0.24
SFSWAP-205ENST00000537164 OR3A3P47888 321 aa13.58□□□□□ -0.24
SFSWAP-205ENST00000537164 F2RL1P55085 397 aa13.58□□□□□ -0.24
SFSWAP-205ENST00000537164 SLC35E3Q7Z769 313 aa13.58□□□□□ -0.24
SFSWAP-205ENST00000537164 EDARADDQ8WWZ3 215 aa13.58□□□□□ -0.24
SFSWAP-205ENST00000537164 R3HDM4Q96D70 268 aa13.58□□□□□ -0.24
SFSWAP-205ENST00000537164 MRPL20Q9BYC9 149 aaKnown RBP13.58□□□□□ -0.24
SFSWAP-205ENST00000537164 IGKV1-6A0A0C4DH72 117 aa13.57□□□□□ -0.24
SFSWAP-205ENST00000537164 METTL21EPA6NDL7 271 aa13.57□□□□□ -0.24
SFSWAP-205ENST00000537164 SERPINE3A8MV23 424 aa13.57□□□□□ -0.24
SFSWAP-205ENST00000537164 TRDCB7Z8K6 153 aa13.57□□□□□ -0.24
SFSWAP-205ENST00000537164 DIRAS3O95661 229 aa13.57□□□□□ -0.24
SFSWAP-205ENST00000537164 SCTP09683 121 aa13.57□□□□□ -0.24
SFSWAP-205ENST00000537164 HIST1H1DP16402 221 aaKnown RBP13.57□□□□□ -0.24
SFSWAP-205ENST00000537164 GPR12P47775 334 aa13.57□□□□□ -0.24
SFSWAP-205ENST00000537164 SRSF7Q16629 238 aaKnown RBP eCLIP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms