RNA–Protein interactions for RNA: ENST00000537068.5

SNHG1-204, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 629 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-204ENST00000537068 LIMS3P0CW19 117 aa4.04□□□□□ -1.76
SNHG1-204ENST00000537068 LIMS4P0CW20 117 aa4.04□□□□□ -1.76
SNHG1-204ENST00000537068 IGHV3-43DP0DP04 118 aa4.04□□□□□ -1.76
SNHG1-204ENST00000537068 EGR2P11161 476 aaPredicted RBP4.04□□□□□ -1.76
SNHG1-204ENST00000537068 LYL1P12980 280 aa4.04□□□□□ -1.76
SNHG1-204ENST00000537068 GP9P14770 177 aa4.04□□□□□ -1.76
SNHG1-204ENST00000537068 SPNP16150 400 aa4.04□□□□□ -1.76
SNHG1-204ENST00000537068 IL3RAP26951 378 aa4.04□□□□□ -1.76
SNHG1-204ENST00000537068 ZNF93P35789 620 aaPredicted RBP4.04□□□□□ -1.76
SNHG1-204ENST00000537068 VEGFCP49767 419 aa4.04□□□□□ -1.76
SNHG1-204ENST00000537068 GTF2A1P52655 376 aaPredicted RBP4.04□□□□□ -1.76
SNHG1-204ENST00000537068 RAB40BQ12829 278 aa4.04□□□□□ -1.76
SNHG1-204ENST00000537068 FAM27D1Q5T7N8 215 aa4.04□□□□□ -1.76
SNHG1-204ENST00000537068 SYT6Q5T7P8 510 aaPredicted RBP4.04□□□□□ -1.76
SNHG1-204ENST00000537068 XAF1Q6GPH4 301 aa4.04□□□□□ -1.76
SNHG1-204ENST00000537068 SATL1Q86VE3 508 aa4.04□□□□□ -1.76
SNHG1-204ENST00000537068 NUDT10Q8NFP7 164 aa4.04□□□□□ -1.76
SNHG1-204ENST00000537068 GPR148Q8TDV2 347 aa4.04□□□□□ -1.76
SNHG1-204ENST00000537068 TMEM106AQ96A25 262 aa4.04□□□□□ -1.76
SNHG1-204ENST00000537068 MRPS24Q96EL2 167 aaKnown RBP4.04□□□□□ -1.76
SNHG1-204ENST00000537068 NUDT11Q96G61 164 aa4.04□□□□□ -1.76
SNHG1-204ENST00000537068 GPER1Q99527 375 aa4.04□□□□□ -1.76
SNHG1-204ENST00000537068 NABP2Q9BQ15 211 aa4.04□□□□□ -1.76
SNHG1-204ENST00000537068 TOLLIPQ9H0E2 274 aa4.04□□□□□ -1.76
SNHG1-204ENST00000537068 METTL9Q9H1A3 318 aa4.04□□□□□ -1.76
SNHG1-204ENST00000537068 FGF20Q9NP95 211 aaPredicted RBP4.04□□□□□ -1.76
SNHG1-204ENST00000537068 TMEM138Q9NPI0 162 aa4.04□□□□□ -1.76
SNHG1-204ENST00000537068 PAK1IP1Q9NWT1 392 aaPredicted RBP4.04□□□□□ -1.76
SNHG1-204ENST00000537068 IMPAD1Q9NX62 359 aa4.04□□□□□ -1.76
SNHG1-204ENST00000537068 GAR1Q9NY12 217 aaKnown RBP4.04□□□□□ -1.76
SNHG1-204ENST00000537068 AASSQ9UDR5 926 aa4.04□□□□□ -1.76
SNHG1-204ENST00000537068 ZNF107Q9UII5 783 aaPredicted RBP4.04□□□□□ -1.76
SNHG1-204ENST00000537068 VSIG4Q9Y279 399 aa4.04□□□□□ -1.76
SNHG1-204ENST00000537068 CSMD3Q7Z407 3707 aa4.04□□□□□ -1.76
SNHG1-204ENST00000537068 TRAV41A0A0B4J266 112 aa4.03□□□□□ -1.76
SNHG1-204ENST00000537068 TRBV5-5A0A0J9YX44 114 aa4.03□□□□□ -1.76
SNHG1-204ENST00000537068 A0A1W2PP11 408 aa4.03□□□□□ -1.76
SNHG1-204ENST00000537068 FAM90A7PA6NKC0 464 aa4.03□□□□□ -1.76
SNHG1-204ENST00000537068 FAM90A23PA8MXZ1 464 aa4.03□□□□□ -1.76
SNHG1-204ENST00000537068 LINC01619G3V211 115 aa4.03□□□□□ -1.76
SNHG1-204ENST00000537068 H3BNX3 289 aa4.03□□□□□ -1.76
SNHG1-204ENST00000537068 AIPO00170 330 aa4.03□□□□□ -1.76
SNHG1-204ENST00000537068 NBR2O15453 112 aa4.03□□□□□ -1.76
SNHG1-204ENST00000537068 SPINT2O43291 252 aa4.03□□□□□ -1.76
SNHG1-204ENST00000537068 YPEL1O60688 119 aa4.03□□□□□ -1.76
SNHG1-204ENST00000537068 FADS2O95864 444 aaKnown RBP4.03□□□□□ -1.76
SNHG1-204ENST00000537068 IGLV1-51P01701 117 aa4.03□□□□□ -1.76
SNHG1-204ENST00000537068 HBZP02008 142 aa4.03□□□□□ -1.76
SNHG1-204ENST00000537068 CSTBP04080 98 aaKnown RBP4.03□□□□□ -1.76
SNHG1-204ENST00000537068 CD2P06729 351 aa4.03□□□□□ -1.76
SNHG1-204ENST00000537068 GTF2F2P13984 249 aa4.03□□□□□ -1.76
SNHG1-204ENST00000537068 RCC1P18754 421 aaPredicted RBP4.03□□□□□ -1.76
SNHG1-204ENST00000537068 CNTFRP26992 372 aa4.03□□□□□ -1.76
SNHG1-204ENST00000537068 ALDH3A2P51648 485 aa4.03□□□□□ -1.76
SNHG1-204ENST00000537068 GBX2P52951 348 aaPredicted RBP4.03□□□□□ -1.76
SNHG1-204ENST00000537068 ACTBP60709 375 aa4.03□□□□□ -1.76
SNHG1-204ENST00000537068 RPS11P62280 158 aaKnown RBP eCLIP4.03□□□□□ -1.76
SNHG1-204ENST00000537068 ADARB1P78563 741 aaKnown RBP4.03□□□□□ -1.76
SNHG1-204ENST00000537068 HTD2P86397 168 aa4.03□□□□□ -1.76
SNHG1-204ENST00000537068 GPR176Q14439 515 aa4.03□□□□□ -1.76
SNHG1-204ENST00000537068 MMDQ15546 238 aa4.03□□□□□ -1.76
SNHG1-204ENST00000537068 C5orf64Q2M2E5 130 aa4.03□□□□□ -1.76
SNHG1-204ENST00000537068 AKIRIN2Q53H80 203 aa4.03□□□□□ -1.76
SNHG1-204ENST00000537068 C6orf141Q5SZD1 244 aa4.03□□□□□ -1.76
SNHG1-204ENST00000537068 C6orf183Q5T699 404 aa4.03□□□□□ -1.76
SNHG1-204ENST00000537068 LPCAT4Q643R3 524 aa4.03□□□□□ -1.76
SNHG1-204ENST00000537068 ZNF660Q6AZW8 331 aaPredicted RBP4.03□□□□□ -1.76
SNHG1-204ENST00000537068 SIGIRRQ6IA17 410 aa4.03□□□□□ -1.76
SNHG1-204ENST00000537068 LIN54Q6MZP7 749 aa4.03□□□□□ -1.76
SNHG1-204ENST00000537068 RPL22L1Q6P5R6 122 aaKnown RBP4.03□□□□□ -1.76
SNHG1-204ENST00000537068 TMEM65Q6PI78 240 aa4.03□□□□□ -1.76
SNHG1-204ENST00000537068 TRAT1Q6PIZ9 186 aa4.03□□□□□ -1.76
SNHG1-204ENST00000537068 CD200R1LQ6Q8B3 271 aa4.03□□□□□ -1.76
SNHG1-204ENST00000537068 ZNF833PQ6ZTB9 187 aa4.03□□□□□ -1.76
SNHG1-204ENST00000537068 CDH26Q8IXH8 852 aa4.03□□□□□ -1.76
SNHG1-204ENST00000537068 ZNF485Q8NCK3 441 aa4.03□□□□□ -1.76
SNHG1-204ENST00000537068 OR52I1Q8NGK6 324 aa4.03□□□□□ -1.76
SNHG1-204ENST00000537068 OR1L1Q8NH94 360 aa4.03□□□□□ -1.76
SNHG1-204ENST00000537068 UBALD1Q8TB05 177 aa4.03□□□□□ -1.76
SNHG1-204ENST00000537068 CCDC107Q8WV48 283 aa4.03□□□□□ -1.76
SNHG1-204ENST00000537068 TSEN15Q8WW01 171 aaKnown RBP4.03□□□□□ -1.76
SNHG1-204ENST00000537068 APH1BQ8WW43 257 aa4.03□□□□□ -1.76
SNHG1-204ENST00000537068 RDH12Q96NR8 316 aa4.03□□□□□ -1.76
SNHG1-204ENST00000537068 YPEL2Q96QA6 119 aa4.03□□□□□ -1.76
SNHG1-204ENST00000537068 OR14A2Q96R54 314 aa4.03□□□□□ -1.76
SNHG1-204ENST00000537068 SPATA25Q9BR10 227 aa4.03□□□□□ -1.76
SNHG1-204ENST00000537068 ZNF251Q9BRH9 671 aa4.03□□□□□ -1.76
SNHG1-204ENST00000537068 ANKRD60Q9BZ19 345 aa4.03□□□□□ -1.76
SNHG1-204ENST00000537068 SPACA1Q9HBV2 294 aa4.03□□□□□ -1.76
SNHG1-204ENST00000537068 RAB9BQ9NP90 201 aa4.03□□□□□ -1.76
SNHG1-204ENST00000537068 ISYNA1Q9NPH2 558 aa4.03□□□□□ -1.76
SNHG1-204ENST00000537068 FAM53CQ9NYF3 392 aa4.03□□□□□ -1.76
SNHG1-204ENST00000537068 TAS2R4Q9NYW5 299 aa4.03□□□□□ -1.76
SNHG1-204ENST00000537068 NKX1-2Q9UD57 310 aaPredicted RBP4.03□□□□□ -1.76
SNHG1-204ENST00000537068 ING4Q9UNL4 249 aa4.03□□□□□ -1.76
SNHG1-204ENST00000537068 FBXO7Q9Y3I1 522 aa4.03□□□□□ -1.76
SNHG1-204ENST00000537068 EPPK1P58107 5090 aaKnown RBP4.03□□□□□ -1.76
SNHG1-204ENST00000537068 RYR2Q92736 4967 aa4.03□□□□□ -1.76
SNHG1-204ENST00000537068 IGHV4OR15-8A0A075B7B6 117 aa4.02□□□□□ -1.77
SNHG1-204ENST00000537068 A0A087WW49 117 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms