RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 TXNL1O43396 289 aa9.88□□□□□ -0.83
PRKDC-207ENST00000536483 ARSBP15848 533 aa9.88□□□□□ -0.83
PRKDC-207ENST00000536483 CD24P25063 80 aa9.88□□□□□ -0.83
PRKDC-207ENST00000536483 CD1BP29016 333 aa9.88□□□□□ -0.83
PRKDC-207ENST00000536483 ZNF134P52741 427 aa9.88□□□□□ -0.83
PRKDC-207ENST00000536483 DIAPH2-AS1Q14236 149 aa9.88□□□□□ -0.83
PRKDC-207ENST00000536483 ZNF846Q147U1 533 aa9.88□□□□□ -0.83
PRKDC-207ENST00000536483 CT45A1Q5HYN5 189 aa9.88□□□□□ -0.83
PRKDC-207ENST00000536483 IZUMO1Q8IYV9 350 aa9.88□□□□□ -0.83
PRKDC-207ENST00000536483 DRAM1Q8N682 238 aa9.88□□□□□ -0.83
PRKDC-207ENST00000536483 Q8N6K4 173 aa9.88□□□□□ -0.83
PRKDC-207ENST00000536483 OR4K15Q8NH41 348 aa9.88□□□□□ -0.83
PRKDC-207ENST00000536483 CT45A3Q8NHU0 189 aa9.88□□□□□ -0.83
PRKDC-207ENST00000536483 DYNC2LI1Q8TCX1 351 aa9.88□□□□□ -0.83
PRKDC-207ENST00000536483 FAM46BQ96A09 425 aa9.88□□□□□ -0.83
PRKDC-207ENST00000536483 NEDD4LQ96PU5 975 aa9.88□□□□□ -0.83
PRKDC-207ENST00000536483 SULT4A1Q9BR01 284 aa9.88□□□□□ -0.83
PRKDC-207ENST00000536483 TAF9BQ9HBM6 251 aa9.88□□□□□ -0.83
PRKDC-207ENST00000536483 CCDC59Q9P031 241 aaKnown RBP9.88□□□□□ -0.83
PRKDC-207ENST00000536483 V9GY05 133 aa9.88□□□□□ -0.83
PRKDC-207ENST00000536483 A0A0A6YYD4 124 aa9.87□□□□□ -0.83
PRKDC-207ENST00000536483 IGHV1-3A0A0C4DH29 117 aa9.87□□□□□ -0.83
PRKDC-207ENST00000536483 UBE2QL1A1L167 161 aa9.87□□□□□ -0.83
PRKDC-207ENST00000536483 HSD17B6O14756 317 aa9.87□□□□□ -0.83
PRKDC-207ENST00000536483 YPEL1O60688 119 aa9.87□□□□□ -0.83
PRKDC-207ENST00000536483 IGHV3-7P01780 117 aa9.87□□□□□ -0.83
PRKDC-207ENST00000536483 SNRNP70P08621 437 aaKnown RBP9.87□□□□□ -0.83
PRKDC-207ENST00000536483 PF4V1P10720 104 aa9.87□□□□□ -0.83
PRKDC-207ENST00000536483 FGF9P31371 208 aaPredicted RBP9.87□□□□□ -0.83
PRKDC-207ENST00000536483 TMEM50BP56557 158 aa9.87□□□□□ -0.83
PRKDC-207ENST00000536483 SPCS2Q15005 226 aa9.87□□□□□ -0.83
PRKDC-207ENST00000536483 HMGN3Q15651 99 aa9.87□□□□□ -0.83
PRKDC-207ENST00000536483 LTC4SQ16873 150 aa9.87□□□□□ -0.83
PRKDC-207ENST00000536483 MORN2Q502X0 79 aa9.87□□□□□ -0.83
PRKDC-207ENST00000536483 TCTEX1D4Q5JR98 221 aa9.87□□□□□ -0.83
PRKDC-207ENST00000536483 OR56B4Q8NH76 319 aa9.87□□□□□ -0.83
PRKDC-207ENST00000536483 OR1L1Q8NH94 360 aa9.87□□□□□ -0.83
PRKDC-207ENST00000536483 RTN4IP1Q8WWV3 396 aaPredicted RBP9.87□□□□□ -0.83
PRKDC-207ENST00000536483 YPEL2Q96QA6 119 aa9.87□□□□□ -0.83
PRKDC-207ENST00000536483 URM1Q9BTM9 101 aaKnown RBP9.87□□□□□ -0.83
PRKDC-207ENST00000536483 FAAP24Q9BTP7 215 aa9.87□□□□□ -0.83
PRKDC-207ENST00000536483 KCNIP1Q9NZI2 227 aa9.87□□□□□ -0.83
PRKDC-207ENST00000536483 JPT1Q9UK76 154 aa9.87□□□□□ -0.83
PRKDC-207ENST00000536483 MOB4Q9Y3A3 225 aa9.87□□□□□ -0.83
PRKDC-207ENST00000536483 AK6Q9Y3D8 172 aaKnown RBP9.87□□□□□ -0.83
PRKDC-207ENST00000536483 ITGB1BP1O14713 200 aa9.86□□□□□ -0.83
PRKDC-207ENST00000536483 LANCL1O43813 399 aa9.86□□□□□ -0.83
PRKDC-207ENST00000536483 PF4P02776 101 aa9.86□□□□□ -0.83
PRKDC-207ENST00000536483 IL3RAP26951 378 aa9.86□□□□□ -0.83
PRKDC-207ENST00000536483 BLVRBP30043 206 aaPredicted RBP9.86□□□□□ -0.83
PRKDC-207ENST00000536483 SOX6P35712 828 aa9.86□□□□□ -0.83
PRKDC-207ENST00000536483 GNG10P50151 68 aa9.86□□□□□ -0.83
PRKDC-207ENST00000536483 RAB11BQ15907 218 aa9.86□□□□□ -0.83
PRKDC-207ENST00000536483 DEFB121Q5J5C9 76 aa9.86□□□□□ -0.83
PRKDC-207ENST00000536483 FAM53AQ6NSI3 398 aaPredicted RBP9.86□□□□□ -0.83
PRKDC-207ENST00000536483 C11orf87Q6NUJ2 197 aa9.86□□□□□ -0.83
PRKDC-207ENST00000536483 MOB1BQ7L9L4 216 aa9.86□□□□□ -0.83
PRKDC-207ENST00000536483 C6orf201Q7Z4U5 140 aa9.86□□□□□ -0.83
PRKDC-207ENST00000536483 CENPVQ7Z7K6 275 aaPredicted RBP9.86□□□□□ -0.83
PRKDC-207ENST00000536483 C5orf56Q8N8D9 126 aa9.86□□□□□ -0.83
PRKDC-207ENST00000536483 OR8H1Q8NGG4 311 aa9.86□□□□□ -0.83
PRKDC-207ENST00000536483 CAPSLQ8WWF8 208 aa9.86□□□□□ -0.83
PRKDC-207ENST00000536483 FAM3DQ96BQ1 224 aa9.86□□□□□ -0.83
PRKDC-207ENST00000536483 CYYR1Q96J86 154 aa9.86□□□□□ -0.83
PRKDC-207ENST00000536483 NICN1Q9BSH3 213 aa9.86□□□□□ -0.83
PRKDC-207ENST00000536483 NXF2Q9GZY0 626 aaKnown RBP9.86□□□□□ -0.83
PRKDC-207ENST00000536483 DCSTAMPQ9H295 470 aa9.86□□□□□ -0.83
PRKDC-207ENST00000536483 OR2S2Q9NQN1 319 aa9.86□□□□□ -0.83
PRKDC-207ENST00000536483 GNG12Q9UBI6 72 aa9.86□□□□□ -0.83
PRKDC-207ENST00000536483 A0A1W2PPE3 182 aa9.85□□□□□ -0.83
PRKDC-207ENST00000536483 TCRBV4S1A1TA0A5B7 111 aa9.85□□□□□ -0.83
PRKDC-207ENST00000536483 SHISA3A0PJX4 238 aa9.85□□□□□ -0.83
PRKDC-207ENST00000536483 PDCD5O14737 125 aa9.85□□□□□ -0.83
PRKDC-207ENST00000536483 SLC31A2O15432 143 aa9.85□□□□□ -0.83
PRKDC-207ENST00000536483 C2orf76Q3KRA6 126 aa9.85□□□□□ -0.83
PRKDC-207ENST00000536483 ABCA11PQ4W5N1 156 aa9.85□□□□□ -0.83
PRKDC-207ENST00000536483 TGIF2LXQ8IUE1 241 aa9.85□□□□□ -0.83
PRKDC-207ENST00000536483 MINDY2Q8NBR6 621 aa9.85□□□□□ -0.83
PRKDC-207ENST00000536483 OR51D1Q8NGF3 324 aa9.85□□□□□ -0.83
PRKDC-207ENST00000536483 OR6Q1Q8NGQ2 317 aa9.85□□□□□ -0.83
PRKDC-207ENST00000536483 UBALD1Q8TB05 177 aa9.85□□□□□ -0.83
PRKDC-207ENST00000536483 PTX4Q96A99 478 aa9.85□□□□□ -0.83
PRKDC-207ENST00000536483 GALMQ96C23 342 aa9.85□□□□□ -0.83
PRKDC-207ENST00000536483 EAF1Q96JC9 268 aaPredicted RBP9.85□□□□□ -0.83
PRKDC-207ENST00000536483 GHITMQ9H3K2 345 aa9.85□□□□□ -0.83
PRKDC-207ENST00000536483 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.85□□□□□ -0.83
PRKDC-207ENST00000536483 PLSCR3Q9NRY6 295 aa9.85□□□□□ -0.83
PRKDC-207ENST00000536483 PLEKHJ1Q9NW61 149 aa9.85□□□□□ -0.83
PRKDC-207ENST00000536483 STEAP1Q9UHE8 339 aa9.85□□□□□ -0.83
PRKDC-207ENST00000536483 RAB22AQ9UL26 194 aa9.85□□□□□ -0.83
PRKDC-207ENST00000536483 MGAT4AQ9UM21 535 aa9.85□□□□□ -0.83
PRKDC-207ENST00000536483 STUB1Q9UNE7 303 aa9.85□□□□□ -0.83
PRKDC-207ENST00000536483 TSSC4Q9Y5U2 329 aaPredicted RBP9.85□□□□□ -0.83
PRKDC-207ENST00000536483 A0A075B6Q4 140 aa9.84□□□□□ -0.83
PRKDC-207ENST00000536483 IGHV3-43A0A0B4J1X8 118 aa9.84□□□□□ -0.83
PRKDC-207ENST00000536483 WI2-2373I1.2A0A1W2PRP0 233 aa9.84□□□□□ -0.83
PRKDC-207ENST00000536483 IFITM5A6NNB3 132 aa9.84□□□□□ -0.83
PRKDC-207ENST00000536483 SOCS1O15524 211 aa9.84□□□□□ -0.83
PRKDC-207ENST00000536483 RGS11O94810 467 aa9.84□□□□□ -0.83
PRKDC-207ENST00000536483 IGKV1D-33P01593 117 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms