RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 ZNF251Q9BRH9 671 aa8.67□□□□□ -1.02
CLSTN3-206ENST00000535668 AGMATQ9BSE5 352 aa8.67□□□□□ -1.02
CLSTN3-206ENST00000535668 FAM192AQ9GZU8 254 aa8.67□□□□□ -1.02
CLSTN3-206ENST00000535668 CST11Q9H112 138 aa8.67□□□□□ -1.02
CLSTN3-206ENST00000535668 GNB4Q9HAV0 340 aa8.67□□□□□ -1.02
CLSTN3-206ENST00000535668 TAF9BQ9HBM6 251 aa8.67□□□□□ -1.02
CLSTN3-206ENST00000535668 ETAA1Q9NY74 926 aa8.67□□□□□ -1.02
CLSTN3-206ENST00000535668 CKLFQ9UBR5 152 aa8.67□□□□□ -1.02
CLSTN3-206ENST00000535668 AASSQ9UDR5 926 aa8.67□□□□□ -1.02
CLSTN3-206ENST00000535668 RAB26Q9ULW5 256 aa8.67□□□□□ -1.02
CLSTN3-206ENST00000535668 ING4Q9UNL4 249 aa8.67□□□□□ -1.02
CLSTN3-206ENST00000535668 TRBV6-6A0A0A6YYG2 114 aa8.66□□□□□ -1.02
CLSTN3-206ENST00000535668 TRAV41A0A0B4J266 112 aa8.66□□□□□ -1.02
CLSTN3-206ENST00000535668 A0A1W2PP11 408 aa8.66□□□□□ -1.02
CLSTN3-206ENST00000535668 OVOL1O14753 267 aa8.66□□□□□ -1.02
CLSTN3-206ENST00000535668 DENRO43583 198 aaKnown RBP8.66□□□□□ -1.02
CLSTN3-206ENST00000535668 RBBP9O75884 186 aa8.66□□□□□ -1.02
CLSTN3-206ENST00000535668 RGS11O94810 467 aa8.66□□□□□ -1.02
CLSTN3-206ENST00000535668 BAG2O95816 211 aa8.66□□□□□ -1.02
CLSTN3-206ENST00000535668 LALBAP00709 142 aa8.66□□□□□ -1.02
CLSTN3-206ENST00000535668 SERPINA2P20848 420 aa8.66□□□□□ -1.02
CLSTN3-206ENST00000535668 VEGFCP49767 419 aa8.66□□□□□ -1.02
CLSTN3-206ENST00000535668 ETV1P50549 477 aa8.66□□□□□ -1.02
CLSTN3-206ENST00000535668 GNB1P62873 340 aa8.66□□□□□ -1.02
CLSTN3-206ENST00000535668 MMDQ15546 238 aa8.66□□□□□ -1.02
CLSTN3-206ENST00000535668 ZIK1Q3SY52 487 aaPredicted RBP8.66□□□□□ -1.02
CLSTN3-206ENST00000535668 ATAD3CQ5T2N8 411 aa8.66□□□□□ -1.02
CLSTN3-206ENST00000535668 LIN54Q6MZP7 749 aa8.66□□□□□ -1.02
CLSTN3-206ENST00000535668 FAM53AQ6NSI3 398 aaPredicted RBP8.66□□□□□ -1.02
CLSTN3-206ENST00000535668 ZNF880Q6PDB4 577 aa8.66□□□□□ -1.02
CLSTN3-206ENST00000535668 NKAIN3Q8N8D7 197 aa8.66□□□□□ -1.02
CLSTN3-206ENST00000535668 OR5AN1Q8NGI8 311 aa8.66□□□□□ -1.02
CLSTN3-206ENST00000535668 OR1L1Q8NH94 360 aa8.66□□□□□ -1.02
CLSTN3-206ENST00000535668 CCDC107Q8WV48 283 aa8.66□□□□□ -1.02
CLSTN3-206ENST00000535668 RCHY1Q96PM5 261 aa8.66□□□□□ -1.02
CLSTN3-206ENST00000535668 ABHD14AQ9BUJ0 271 aa8.66□□□□□ -1.02
CLSTN3-206ENST00000535668 ANKRD60Q9BZ19 345 aa8.66□□□□□ -1.02
CLSTN3-206ENST00000535668 OR2S2Q9NQN1 319 aa8.66□□□□□ -1.02
CLSTN3-206ENST00000535668 C19orf73Q9NVV2 129 aa8.66□□□□□ -1.02
CLSTN3-206ENST00000535668 NDUFA13Q9P0J0 144 aa8.66□□□□□ -1.02
CLSTN3-206ENST00000535668 TRAPPC2LQ9UL33 140 aa8.66□□□□□ -1.02
CLSTN3-206ENST00000535668 ERGIC3Q9Y282 383 aa8.66□□□□□ -1.02
CLSTN3-206ENST00000535668 EXOSC1Q9Y3B2 195 aaKnown RBP8.66□□□□□ -1.02
CLSTN3-206ENST00000535668 EPPK1P58107 5090 aaKnown RBP8.65□□□□□ -1.02
CLSTN3-206ENST00000535668 STARD9Q9P2P6 4700 aa8.65□□□□□ -1.02
CLSTN3-206ENST00000535668 TRAV8-7A0A075B6U6 113 aa8.65□□□□□ -1.02
CLSTN3-206ENST00000535668 IGHV3-43A0A0B4J1X8 118 aa8.65□□□□□ -1.02
CLSTN3-206ENST00000535668 LCE6AA0A183 80 aa8.65□□□□□ -1.02
CLSTN3-206ENST00000535668 OR5H14A6NHG9 310 aa8.65□□□□□ -1.02
CLSTN3-206ENST00000535668 LINC01619G3V211 115 aa8.65□□□□□ -1.02
CLSTN3-206ENST00000535668 G3V318 75 aa8.65□□□□□ -1.02
CLSTN3-206ENST00000535668 ATP6V0E1O15342 81 aa8.65□□□□□ -1.02
CLSTN3-206ENST00000535668 SOX15O60248 233 aa8.65□□□□□ -1.02
CLSTN3-206ENST00000535668 PDCD6O75340 191 aa8.65□□□□□ -1.02
CLSTN3-206ENST00000535668 NAPSAO96009 420 aa8.65□□□□□ -1.02
CLSTN3-206ENST00000535668 LGALS1P09382 135 aaKnown RBP8.65□□□□□ -1.02
CLSTN3-206ENST00000535668 OR8U9P0C7N5 309 aa8.65□□□□□ -1.02
CLSTN3-206ENST00000535668 UBBP0CG47 229 aa8.65□□□□□ -1.02
CLSTN3-206ENST00000535668 IGHV3-43DP0DP04 118 aa8.65□□□□□ -1.02
CLSTN3-206ENST00000535668 EGR2P11161 476 aaPredicted RBP8.65□□□□□ -1.02
CLSTN3-206ENST00000535668 MC5RP33032 325 aa8.65□□□□□ -1.02
CLSTN3-206ENST00000535668 CAPGP40121 348 aa8.65□□□□□ -1.02
CLSTN3-206ENST00000535668 RAB25P57735 213 aa8.65□□□□□ -1.02
CLSTN3-206ENST00000535668 TAS2R43P59537 309 aa8.65□□□□□ -1.02
CLSTN3-206ENST00000535668 ADARB1P78563 741 aaKnown RBP8.65□□□□□ -1.02
CLSTN3-206ENST00000535668 MED21Q13503 144 aa8.65□□□□□ -1.02
CLSTN3-206ENST00000535668 DOC2BQ14184 412 aa8.65□□□□□ -1.02
CLSTN3-206ENST00000535668 HMGN3Q15651 99 aa8.65□□□□□ -1.02
CLSTN3-206ENST00000535668 GLIPR1L1Q6UWM5 242 aa8.65□□□□□ -1.02
CLSTN3-206ENST00000535668 ZNF562Q6V9R5 426 aa8.65□□□□□ -1.02
CLSTN3-206ENST00000535668 MRPL30Q8TCC3 161 aaKnown RBP8.65□□□□□ -1.02
CLSTN3-206ENST00000535668 DCUN1D4Q92564 292 aa8.65□□□□□ -1.02
CLSTN3-206ENST00000535668 RITA1Q96K30 269 aa8.65□□□□□ -1.02
CLSTN3-206ENST00000535668 IFI27L2Q9H2X8 130 aa8.65□□□□□ -1.02
CLSTN3-206ENST00000535668 SLA2Q9H6Q3 261 aa8.65□□□□□ -1.02
CLSTN3-206ENST00000535668 EDA2RQ9HAV5 297 aa8.65□□□□□ -1.02
CLSTN3-206ENST00000535668 PEX16Q9Y5Y5 336 aa8.65□□□□□ -1.02
CLSTN3-206ENST00000535668 BIRC6Q9NR09 4857 aa8.64□□□□□ -1.03
CLSTN3-206ENST00000535668 IGLV1-51P01701 117 aa8.64□□□□□ -1.03
CLSTN3-206ENST00000535668 FRMD6-AS1P0C7T7 363 aa8.64□□□□□ -1.03
CLSTN3-206ENST00000535668 MGMTP16455 207 aa8.64□□□□□ -1.03
CLSTN3-206ENST00000535668 BLVRBP30043 206 aaPredicted RBP8.64□□□□□ -1.03
CLSTN3-206ENST00000535668 CX3CL1P78423 397 aa8.64□□□□□ -1.03
CLSTN3-206ENST00000535668 NDPQ00604 133 aa8.64□□□□□ -1.03
CLSTN3-206ENST00000535668 TMEM267Q0VDI3 215 aaPredicted RBP8.64□□□□□ -1.03
CLSTN3-206ENST00000535668 MOGAT2Q3SYC2 334 aa8.64□□□□□ -1.03
CLSTN3-206ENST00000535668 OR2G6Q5TZ20 316 aa8.64□□□□□ -1.03
CLSTN3-206ENST00000535668 Q8N1Y9 231 aa8.64□□□□□ -1.03
CLSTN3-206ENST00000535668 OR6Q1Q8NGQ2 317 aa8.64□□□□□ -1.03
CLSTN3-206ENST00000535668 DLX4Q92988 240 aaPredicted RBP8.64□□□□□ -1.03
CLSTN3-206ENST00000535668 PTX4Q96A99 478 aa8.64□□□□□ -1.03
CLSTN3-206ENST00000535668 GALMQ96C23 342 aa8.64□□□□□ -1.03
CLSTN3-206ENST00000535668 RHOVQ96L33 236 aa8.64□□□□□ -1.03
CLSTN3-206ENST00000535668 DERL3Q96Q80 235 aa8.64□□□□□ -1.03
CLSTN3-206ENST00000535668 ISYNA1Q9NPH2 558 aa8.64□□□□□ -1.03
CLSTN3-206ENST00000535668 SIGLEC8Q9NYZ4 499 aa8.64□□□□□ -1.03
CLSTN3-206ENST00000535668 KCNIP1Q9NZI2 227 aa8.64□□□□□ -1.03
CLSTN3-206ENST00000535668 PIPOXQ9P0Z9 390 aa8.64□□□□□ -1.03
CLSTN3-206ENST00000535668 FOXA2Q9Y261 457 aaPredicted RBP8.64□□□□□ -1.03
CLSTN3-206ENST00000535668 SAA2-SAA4A0A096LPE2 208 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms