RNA–Protein interactions for RNA: ENST00000535493.5

HDAC4-214, Transcript of histone deacetylase 4, humanhuman

TSL 2

Gene HDAC4, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-214ENST00000535493 LY6G6EA0A0G2JKS1 128 aa11.38□□□□□ -0.59
HDAC4-214ENST00000535493 FGF12P61328 243 aa11.38□□□□□ -0.59
HDAC4-214ENST00000535493 JOSD1Q15040 202 aaPredicted RBP11.38□□□□□ -0.59
HDAC4-214ENST00000535493 PSMF1Q92530 271 aa11.38□□□□□ -0.59
HDAC4-214ENST00000535493 TCFL5Q9UL49 500 aa11.38□□□□□ -0.59
HDAC4-214ENST00000535493 OR2W1Q9Y3N9 320 aa11.38□□□□□ -0.59
HDAC4-214ENST00000535493 U3KQA8 63 aa11.38□□□□□ -0.59
HDAC4-214ENST00000535493 TRAV24A0A0B4J272 114 aa11.38□□□□□ -0.59
HDAC4-214ENST00000535493 KLF7O75840 302 aaPredicted RBP11.38□□□□□ -0.59
HDAC4-214ENST00000535493 IGLV2-14P01704 120 aa11.38□□□□□ -0.59
HDAC4-214ENST00000535493 PFN1P07737 140 aaKnown RBP11.38□□□□□ -0.59
HDAC4-214ENST00000535493 CHRNA7P36544 502 aa11.38□□□□□ -0.59
HDAC4-214ENST00000535493 GALR1P47211 349 aa11.38□□□□□ -0.59
HDAC4-214ENST00000535493 LINC00205P59089 165 aa11.38□□□□□ -0.59
HDAC4-214ENST00000535493 RPL23P62829 140 aaKnown RBP11.38□□□□□ -0.59
HDAC4-214ENST00000535493 ARF1P84077 181 aaKnown RBP11.38□□□□□ -0.59
HDAC4-214ENST00000535493 FOXO1Q12778 655 aa11.38□□□□□ -0.59
HDAC4-214ENST00000535493 PNRC1Q12796 327 aaPredicted RBP11.38□□□□□ -0.59
HDAC4-214ENST00000535493 ZNF124Q15973 351 aa11.38□□□□□ -0.59
HDAC4-214ENST00000535493 TRIM61Q5EBN2 209 aa11.38□□□□□ -0.59
HDAC4-214ENST00000535493 ZNF324BQ6AW86 544 aaPredicted RBP11.38□□□□□ -0.59
HDAC4-214ENST00000535493 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.38□□□□□ -0.59
HDAC4-214ENST00000535493 OR4F5Q8NH21 305 aa11.38□□□□□ -0.59
HDAC4-214ENST00000535493 OR5P3Q8WZ94 311 aa11.38□□□□□ -0.59
HDAC4-214ENST00000535493 LURAP1Q96LR2 239 aa11.38□□□□□ -0.59
HDAC4-214ENST00000535493 IMMP1LQ96LU5 166 aa11.38□□□□□ -0.59
HDAC4-214ENST00000535493 OR4F4Q96R69 305 aa11.38□□□□□ -0.59
HDAC4-214ENST00000535493 PRDM6Q9NQX0 595 aa11.38□□□□□ -0.59
HDAC4-214ENST00000535493 CEP192Q8TEP8 1941 aa11.38□□□□□ -0.59
HDAC4-214ENST00000535493 TRAV1-1A0A0B4J248 108 aa11.37□□□□□ -0.59
HDAC4-214ENST00000535493 PGPEP1LA6NFU8 196 aa11.37□□□□□ -0.59
HDAC4-214ENST00000535493 CLDN1O95832 211 aa11.37□□□□□ -0.59
HDAC4-214ENST00000535493 TMEM241Q24JQ0 296 aa11.37□□□□□ -0.59
HDAC4-214ENST00000535493 BSXQ3C1V8 233 aa11.37□□□□□ -0.59
HDAC4-214ENST00000535493 ACSM6Q6P461 480 aa11.37□□□□□ -0.59
HDAC4-214ENST00000535493 MRPL21Q7Z2W9 205 aaKnown RBP11.37□□□□□ -0.59
HDAC4-214ENST00000535493 OR51G1Q8NGK1 321 aa11.37□□□□□ -0.59
HDAC4-214ENST00000535493 ADGRG7Q96K78 797 aa11.37□□□□□ -0.59
HDAC4-214ENST00000535493 KIR2DS1A0A191URI9 304 aa11.37□□□□□ -0.59
HDAC4-214ENST00000535493 PINLYPA6NC86 204 aa11.37□□□□□ -0.59
HDAC4-214ENST00000535493 C1QTNF9BB2RNN3 333 aa11.37□□□□□ -0.59
HDAC4-214ENST00000535493 PPP5D1E7EU14 171 aa11.37□□□□□ -0.59
HDAC4-214ENST00000535493 H7BYZ3 331 aa11.37□□□□□ -0.59
HDAC4-214ENST00000535493 SRFP11831 508 aa11.37□□□□□ -0.59
HDAC4-214ENST00000535493 KIR2DS4P43632 304 aa11.37□□□□□ -0.59
HDAC4-214ENST00000535493 MEF2BQ02080 365 aaPredicted RBP11.37□□□□□ -0.59
HDAC4-214ENST00000535493 KIR2DS1Q14954 304 aa11.37□□□□□ -0.59
HDAC4-214ENST00000535493 MKXQ8IYA7 352 aa11.37□□□□□ -0.59
HDAC4-214ENST00000535493 RAB40CQ96S21 281 aa11.37□□□□□ -0.59
HDAC4-214ENST00000535493 C1QTNF5Q9BXJ0 243 aa11.37□□□□□ -0.59
HDAC4-214ENST00000535493 PARLQ9H300 379 aa11.37□□□□□ -0.59
HDAC4-214ENST00000535493 DEPPQ9NTK1 212 aa11.37□□□□□ -0.59
HDAC4-214ENST00000535493 SIRPB1O00241 398 aa11.37□□□□□ -0.59
HDAC4-214ENST00000535493 KRASP01116 189 aa11.37□□□□□ -0.59
HDAC4-214ENST00000535493 CRYAAP02489 173 aa11.37□□□□□ -0.59
HDAC4-214ENST00000535493 FOSL1P15407 271 aa11.37□□□□□ -0.59
HDAC4-214ENST00000535493 LRRC75BQ2VPJ9 315 aa11.37□□□□□ -0.59
HDAC4-214ENST00000535493 MRGPRGQ86SM5 289 aa11.37□□□□□ -0.59
HDAC4-214ENST00000535493 WDR61Q9GZS3 305 aaKnown RBP11.37□□□□□ -0.59
HDAC4-214ENST00000535493 RAMP3O60896 148 aa11.36□□□□□ -0.59
HDAC4-214ENST00000535493 FGF7P21781 194 aa11.36□□□□□ -0.59
HDAC4-214ENST00000535493 NUBP1P53384 320 aa11.36□□□□□ -0.59
HDAC4-214ENST00000535493 KRTAP27-1Q3LI81 207 aa11.36□□□□□ -0.59
HDAC4-214ENST00000535493 ZNF585BQ52M93 769 aa11.36□□□□□ -0.59
HDAC4-214ENST00000535493 MRPL41Q8IXM3 137 aaKnown RBP11.36□□□□□ -0.59
HDAC4-214ENST00000535493 MBD3L1Q8WWY6 194 aa11.36□□□□□ -0.59
HDAC4-214ENST00000535493 TAF15Q92804 592 aaKnown RBP eCLIP11.36□□□□□ -0.59
HDAC4-214ENST00000535493 TMEM204Q9BSN7 226 aa11.36□□□□□ -0.59
HDAC4-214ENST00000535493 REPIN1Q9BWE0 567 aaKnown RBP11.36□□□□□ -0.59
HDAC4-214ENST00000535493 SRD5A3Q9H8P0 318 aa11.36□□□□□ -0.59
HDAC4-214ENST00000535493 CBLN4Q9NTU7 201 aa11.36□□□□□ -0.59
HDAC4-214ENST00000535493 TMEM242Q9NWH2 141 aa11.36□□□□□ -0.59
HDAC4-214ENST00000535493 CLN8Q9UBY8 286 aa11.36□□□□□ -0.59
HDAC4-214ENST00000535493 ZDBF2Q9HCK1 2354 aa11.36□□□□□ -0.59
HDAC4-214ENST00000535493 SVILO95425 2214 aa11.36□□□□□ -0.59
HDAC4-214ENST00000535493 KIAA1549Q9HCM3 1950 aa11.36□□□□□ -0.59
HDAC4-214ENST00000535493 TCAPO15273 167 aa11.36□□□□□ -0.59
HDAC4-214ENST00000535493 WNT5AP41221 380 aa11.36□□□□□ -0.59
HDAC4-214ENST00000535493 SLC38A11Q08AI6 406 aa11.36□□□□□ -0.59
HDAC4-214ENST00000535493 OR10G4Q8NGN3 311 aa11.36□□□□□ -0.59
HDAC4-214ENST00000535493 SF3B5Q9BWJ5 86 aaKnown RBP11.36□□□□□ -0.59
HDAC4-214ENST00000535493 NAT8Q9UHE5 227 aa11.36□□□□□ -0.59
HDAC4-214ENST00000535493 CELA3AP09093 270 aa11.35□□□□□ -0.59
HDAC4-214ENST00000535493 HNF1AP20823 631 aa11.35□□□□□ -0.59
HDAC4-214ENST00000535493 GDF1P27539 372 aa11.35□□□□□ -0.59
HDAC4-214ENST00000535493 OTX2P32243 289 aa11.35□□□□□ -0.59
HDAC4-214ENST00000535493 UBE2G2P60604 165 aa11.35□□□□□ -0.59
HDAC4-214ENST00000535493 CEACAM21Q3KPI0 293 aa11.35□□□□□ -0.59
HDAC4-214ENST00000535493 TMEM41BQ5BJD5 291 aa11.35□□□□□ -0.59
HDAC4-214ENST00000535493 DPPA3Q6W0C5 159 aa11.35□□□□□ -0.59
HDAC4-214ENST00000535493 DDA1Q9BW61 102 aa11.35□□□□□ -0.59
HDAC4-214ENST00000535493 PAGE4O60829 102 aa11.35□□□□□ -0.59
HDAC4-214ENST00000535493 MRPL33O75394 65 aaKnown RBP11.35□□□□□ -0.59
HDAC4-214ENST00000535493 TFF1P04155 84 aa11.35□□□□□ -0.59
HDAC4-214ENST00000535493 P04436 131 aa11.35□□□□□ -0.59
HDAC4-214ENST00000535493 CA6P23280 308 aa11.35□□□□□ -0.59
HDAC4-214ENST00000535493 PCBD1P61457 104 aa11.35□□□□□ -0.59
HDAC4-214ENST00000535493 ZNF816Q0VGE8 651 aaPredicted RBP11.35□□□□□ -0.59
HDAC4-214ENST00000535493 RAB30Q15771 203 aa11.35□□□□□ -0.59
HDAC4-214ENST00000535493 GCSAMLQ5JQS6 135 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms