RNA–Protein interactions for RNA: ENST00000534356.1

CASP4-213, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-213ENST00000534356 RAP1AP62834 184 aa3.61□□□□□ -1.83
CASP4-213ENST00000534356 ACTG2P63267 376 aa3.61□□□□□ -1.83
CASP4-213ENST00000534356 LCN2P80188 198 aa3.61□□□□□ -1.83
CASP4-213ENST00000534356 H3F3AP84243 136 aa3.61□□□□□ -1.83
CASP4-213ENST00000534356 ECH1Q13011 328 aa3.61□□□□□ -1.83
CASP4-213ENST00000534356 SELENBP1Q13228 472 aa3.61□□□□□ -1.83
CASP4-213ENST00000534356 SKP2Q13309 424 aa3.61□□□□□ -1.83
CASP4-213ENST00000534356 SLC9A3R2Q15599 337 aa3.61□□□□□ -1.83
CASP4-213ENST00000534356 ABCA11PQ4W5N1 156 aa3.61□□□□□ -1.83
CASP4-213ENST00000534356 ANXA8L1Q5VT79 327 aa3.61□□□□□ -1.83
CASP4-213ENST00000534356 CLEC6AQ6EIG7 209 aa3.61□□□□□ -1.83
CASP4-213ENST00000534356 NANOGP8Q6NSW7 305 aa3.61□□□□□ -1.83
CASP4-213ENST00000534356 TEX43Q6ZNM6 134 aa3.61□□□□□ -1.83
CASP4-213ENST00000534356 AAED1Q7RTV5 226 aa3.61□□□□□ -1.83
CASP4-213ENST00000534356 HDDC2Q7Z4H3 204 aa3.61□□□□□ -1.83
CASP4-213ENST00000534356 MDP1Q86V88 176 aa3.61□□□□□ -1.83
CASP4-213ENST00000534356 RIBC1Q8N443 379 aaPredicted RBP3.61□□□□□ -1.83
CASP4-213ENST00000534356 MMGT1Q8N4V1 131 aa3.61□□□□□ -1.83
CASP4-213ENST00000534356 KRTCAP2Q8N6L1 136 aa3.61□□□□□ -1.83
CASP4-213ENST00000534356 CDRT4Q8N9R6 151 aa3.61□□□□□ -1.83
CASP4-213ENST00000534356 OR10R2Q8NGX6 335 aa3.61□□□□□ -1.83
CASP4-213ENST00000534356 OR7D2Q96RA2 312 aa3.61□□□□□ -1.83
CASP4-213ENST00000534356 SDF2Q99470 211 aa3.61□□□□□ -1.83
CASP4-213ENST00000534356 SCRT1Q9BWW7 348 aa3.61□□□□□ -1.83
CASP4-213ENST00000534356 OR51B6Q9H340 312 aa3.61□□□□□ -1.83
CASP4-213ENST00000534356 DYNLRB1Q9NP97 96 aa3.61□□□□□ -1.83
CASP4-213ENST00000534356 ACER3Q9NUN7 267 aa3.61□□□□□ -1.83
CASP4-213ENST00000534356 RYR2Q92736 4967 aa3.61□□□□□ -1.83
CASP4-213ENST00000534356 TMED7-TICAM2A0A0A6YYA0 188 aa3.6□□□□□ -1.83
CASP4-213ENST00000534356 IGHV3-74A0A0B4J1X5 117 aa3.6□□□□□ -1.83
CASP4-213ENST00000534356 SMIM24O75264 130 aa3.6□□□□□ -1.83
CASP4-213ENST00000534356 HLA-HP01893 362 aa3.6□□□□□ -1.83
CASP4-213ENST00000534356 RBP1P09455 135 aa3.6□□□□□ -1.83
CASP4-213ENST00000534356 LINC00032P0C843 101 aa3.6□□□□□ -1.83
CASP4-213ENST00000534356 CCL2P13500 99 aa3.6□□□□□ -1.83
CASP4-213ENST00000534356 PRTN3P24158 256 aa3.6□□□□□ -1.83
CASP4-213ENST00000534356 MAS1LP35410 378 aa3.6□□□□□ -1.83
CASP4-213ENST00000534356 IDH2P48735 452 aaKnown RBP3.6□□□□□ -1.83
CASP4-213ENST00000534356 SERPINB8P50452 374 aa3.6□□□□□ -1.83
CASP4-213ENST00000534356 PSMD4P55036 377 aaKnown RBP3.6□□□□□ -1.83
CASP4-213ENST00000534356 CCL8P80075 99 aa3.6□□□□□ -1.83
CASP4-213ENST00000534356 FUT5Q11128 374 aa3.6□□□□□ -1.83
CASP4-213ENST00000534356 BAMBIQ13145 260 aa3.6□□□□□ -1.83
CASP4-213ENST00000534356 ERCC8Q13216 396 aa3.6□□□□□ -1.83
CASP4-213ENST00000534356 CLINT1Q14677 625 aa3.6□□□□□ -1.83
CASP4-213ENST00000534356 GINS1Q14691 196 aa3.6□□□□□ -1.83
CASP4-213ENST00000534356 SPIN4Q56A73 249 aa3.6□□□□□ -1.83
CASP4-213ENST00000534356 OAFQ86UD1 273 aa3.6□□□□□ -1.83
CASP4-213ENST00000534356 OFCC1Q8IZS5 231 aa3.6□□□□□ -1.83
CASP4-213ENST00000534356 CCNYL1Q8N7R7 359 aa3.6□□□□□ -1.83
CASP4-213ENST00000534356 OR51F2Q8NH61 342 aa3.6□□□□□ -1.83
CASP4-213ENST00000534356 DCAKDQ8WVC6 231 aa3.6□□□□□ -1.83
CASP4-213ENST00000534356 RAB8BQ92930 207 aa3.6□□□□□ -1.83
CASP4-213ENST00000534356 TMIGD2Q96BF3 282 aa3.6□□□□□ -1.83
CASP4-213ENST00000534356 ZNF75AQ96N20 296 aa3.6□□□□□ -1.83
CASP4-213ENST00000534356 ZNF382Q96SR6 550 aa3.6□□□□□ -1.83
CASP4-213ENST00000534356 MRPL57Q9BQC6 102 aaKnown RBP3.6□□□□□ -1.83
CASP4-213ENST00000534356 PKIBQ9C010 78 aa3.6□□□□□ -1.83
CASP4-213ENST00000534356 PIGUQ9H490 435 aa3.6□□□□□ -1.83
CASP4-213ENST00000534356 MYOZ1Q9NP98 299 aaPredicted RBP3.6□□□□□ -1.83
CASP4-213ENST00000534356 ISYNA1Q9NPH2 558 aa3.6□□□□□ -1.83
CASP4-213ENST00000534356 NUP50Q9UKX7 468 aa3.6□□□□□ -1.83
CASP4-213ENST00000534356 FIS1Q9Y3D6 152 aa3.6□□□□□ -1.83
CASP4-213ENST00000534356 CSDC2Q9Y534 153 aaKnown RBP3.6□□□□□ -1.83
CASP4-213ENST00000534356 TENM2Q9NT68 2774 aa3.6□□□□□ -1.83
CASP4-213ENST00000534356 A0A075B6Q4 140 aa3.59□□□□□ -1.83
CASP4-213ENST00000534356 LOC100653049A0A140TA62 436 aa3.59□□□□□ -1.83
CASP4-213ENST00000534356 BOLA2-SMG1P6H3BVE0 249 aa3.59□□□□□ -1.83
CASP4-213ENST00000534356 RNF13O43567 381 aa3.59□□□□□ -1.83
CASP4-213ENST00000534356 EIF4E2O60573 245 aaKnown RBP3.59□□□□□ -1.83
CASP4-213ENST00000534356 KRT34O76011 436 aa3.59□□□□□ -1.83
CASP4-213ENST00000534356 CSTAP01040 98 aa3.59□□□□□ -1.83
CASP4-213ENST00000534356 ZNF35P13682 527 aa3.59□□□□□ -1.83
CASP4-213ENST00000534356 CBR1P16152 277 aa3.59□□□□□ -1.83
CASP4-213ENST00000534356 CSNK1A1P48729 337 aa3.59□□□□□ -1.83
CASP4-213ENST00000534356 PSPHP78330 225 aa3.59□□□□□ -1.83
CASP4-213ENST00000534356 GLO1Q04760 184 aa3.59□□□□□ -1.83
CASP4-213ENST00000534356 OR7A5Q15622 319 aa3.59□□□□□ -1.83
CASP4-213ENST00000534356 ZNF141Q15928 474 aa3.59□□□□□ -1.83
CASP4-213ENST00000534356 CARD17Q5XLA6 110 aa3.59□□□□□ -1.83
CASP4-213ENST00000534356 C3orf33Q6P1S2 294 aa3.59□□□□□ -1.83
CASP4-213ENST00000534356 CLECL1Q8IZS7 167 aa3.59□□□□□ -1.83
CASP4-213ENST00000534356 DEFB108BQ8NET1 73 aa3.59□□□□□ -1.83
CASP4-213ENST00000534356 KCNG3Q8TAE7 436 aa3.59□□□□□ -1.83
CASP4-213ENST00000534356 CREB3L1Q96BA8 519 aa3.59□□□□□ -1.83
CASP4-213ENST00000534356 PPCDCQ96CD2 204 aa3.59□□□□□ -1.83
CASP4-213ENST00000534356 PANX1Q96RD7 426 aa3.59□□□□□ -1.83
CASP4-213ENST00000534356 SPIN2AQ99865 258 aa3.59□□□□□ -1.83
CASP4-213ENST00000534356 SPIN2BQ9BPZ2 258 aa3.59□□□□□ -1.83
CASP4-213ENST00000534356 SUCNR1Q9BXA5 334 aa3.59□□□□□ -1.83
CASP4-213ENST00000534356 C12orf10Q9HB07 376 aa3.59□□□□□ -1.83
CASP4-213ENST00000534356 MED29Q9NX70 200 aa3.59□□□□□ -1.83
CASP4-213ENST00000534356 EMC3Q9P0I2 261 aa3.59□□□□□ -1.83
CASP4-213ENST00000534356 ING4Q9UNL4 249 aa3.59□□□□□ -1.83
CASP4-213ENST00000534356 TENM3Q9P273 2699 aa3.59□□□□□ -1.83
CASP4-213ENST00000534356 VGLL3A8MV65 326 aa3.58□□□□□ -1.84
CASP4-213ENST00000534356 GPR171O14626 319 aa3.58□□□□□ -1.84
CASP4-213ENST00000534356 CASQ2O14958 399 aaPredicted RBP3.58□□□□□ -1.84
CASP4-213ENST00000534356 EIF3HO15372 352 aaKnown RBP eCLIP3.58□□□□□ -1.84
CASP4-213ENST00000534356 SCN2BO60939 215 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms