RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 C7orf26Q96N11 449 aa7.62□□□□□ -1.19
CSDE1-215ENST00000533818 APOL4Q9BPW4 351 aa7.62□□□□□ -1.19
CSDE1-215ENST00000533818 SCRT1Q9BWW7 348 aa7.62□□□□□ -1.19
CSDE1-215ENST00000533818 IL1RAPQ9NPH3 570 aa7.62□□□□□ -1.19
CSDE1-215ENST00000533818 GID8Q9NWU2 228 aa7.62□□□□□ -1.19
CSDE1-215ENST00000533818 SNX5Q9Y5X3 404 aa7.62□□□□□ -1.19
CSDE1-215ENST00000533818 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.61□□□□□ -1.19
CSDE1-215ENST00000533818 TMEM30CPA0ZSE6 113 aa7.61□□□□□ -1.19
CSDE1-215ENST00000533818 TMEM213A2RRL7 107 aa7.61□□□□□ -1.19
CSDE1-215ENST00000533818 PPP5D1E7EU14 171 aa7.61□□□□□ -1.19
CSDE1-215ENST00000533818 GGCTO75223 188 aaKnown RBP7.61□□□□□ -1.19
CSDE1-215ENST00000533818 TUSC2O75896 110 aa7.61□□□□□ -1.19
CSDE1-215ENST00000533818 FADS2O95864 444 aaKnown RBP7.61□□□□□ -1.19
CSDE1-215ENST00000533818 GASTP01350 101 aa7.61□□□□□ -1.19
CSDE1-215ENST00000533818 ATF1P18846 271 aa7.61□□□□□ -1.19
CSDE1-215ENST00000533818 RPS7P62081 194 aaKnown RBP7.61□□□□□ -1.19
CSDE1-215ENST00000533818 LIPEQ05469 1076 aa7.61□□□□□ -1.19
CSDE1-215ENST00000533818 ATP5G2Q06055 141 aa7.61□□□□□ -1.19
CSDE1-215ENST00000533818 TMEM187Q14656 261 aa7.61□□□□□ -1.19
CSDE1-215ENST00000533818 PLEKHG7Q6ZR37 379 aa7.61□□□□□ -1.19
CSDE1-215ENST00000533818 OR9Q2Q8NGE9 314 aa7.61□□□□□ -1.19
CSDE1-215ENST00000533818 ASB9Q96DX5 294 aa7.61□□□□□ -1.19
CSDE1-215ENST00000533818 TMEM68Q96MH6 324 aa7.61□□□□□ -1.19
CSDE1-215ENST00000533818 C17orf77Q96MU5 243 aa7.61□□□□□ -1.19
CSDE1-215ENST00000533818 ADI1Q9BV57 179 aa7.61□□□□□ -1.19
CSDE1-215ENST00000533818 CMTM6Q9NX76 183 aa7.61□□□□□ -1.19
CSDE1-215ENST00000533818 RCC2Q9P258 522 aaKnown RBP7.61□□□□□ -1.19
CSDE1-215ENST00000533818 ZNF230Q9UIE0 474 aaPredicted RBP7.61□□□□□ -1.19
CSDE1-215ENST00000533818 ING4Q9UNL4 249 aa7.61□□□□□ -1.19
CSDE1-215ENST00000533818 IGHV4-28A0A0C4DH34 117 aa7.6□□□□□ -1.19
CSDE1-215ENST00000533818 MAGEB4O15481 346 aaPredicted RBP7.6□□□□□ -1.19
CSDE1-215ENST00000533818 PRODHO43272 600 aa7.6□□□□□ -1.19
CSDE1-215ENST00000533818 SPINT2O43291 252 aa7.6□□□□□ -1.19
CSDE1-215ENST00000533818 OCM2P0CE71 109 aa7.6□□□□□ -1.19
CSDE1-215ENST00000533818 OCMP0CE72 109 aaPredicted RBP7.6□□□□□ -1.19
CSDE1-215ENST00000533818 T-ENOLP0DO92 83 aa7.6□□□□□ -1.19
CSDE1-215ENST00000533818 RRM2P31350 389 aa7.6□□□□□ -1.19
CSDE1-215ENST00000533818 MAGEA2P43356 314 aa7.6□□□□□ -1.19
CSDE1-215ENST00000533818 PSG5Q15238 335 aa7.6□□□□□ -1.19
CSDE1-215ENST00000533818 TNFAIP8L3Q5GJ75 292 aa7.6□□□□□ -1.19
CSDE1-215ENST00000533818 COQ5Q5HYK3 327 aa7.6□□□□□ -1.19
CSDE1-215ENST00000533818 Q6ZSN1 163 aa7.6□□□□□ -1.19
CSDE1-215ENST00000533818 ODF3L1Q8IXM7 274 aa7.6□□□□□ -1.19
CSDE1-215ENST00000533818 ADAD2Q8NCV1 583 aaKnown RBP7.6□□□□□ -1.19
CSDE1-215ENST00000533818 C10orf35Q96D05 121 aa7.6□□□□□ -1.19
CSDE1-215ENST00000533818 MRPS24Q96EL2 167 aaKnown RBP7.6□□□□□ -1.19
CSDE1-215ENST00000533818 OPALINQ96PE5 141 aa7.6□□□□□ -1.19
CSDE1-215ENST00000533818 SPAG8Q99932 426 aaPredicted RBP7.6□□□□□ -1.19
CSDE1-215ENST00000533818 BTBD10Q9BSF8 475 aa7.6□□□□□ -1.19
CSDE1-215ENST00000533818 DPCDQ9BVM2 203 aaPredicted RBP7.6□□□□□ -1.19
CSDE1-215ENST00000533818 KRTAP9-2Q9BYQ4 174 aa7.6□□□□□ -1.19
CSDE1-215ENST00000533818 AKIP1Q9NQ31 210 aa7.6□□□□□ -1.19
CSDE1-215ENST00000533818 AP3M1Q9Y2T2 418 aa7.6□□□□□ -1.19
CSDE1-215ENST00000533818 TMEM14AQ9Y6G1 99 aa7.6□□□□□ -1.19
CSDE1-215ENST00000533818 KRTAP9-6A0A140TA67 174 aa7.59□□□□□ -1.19
CSDE1-215ENST00000533818 H7C2Y5 167 aa7.59□□□□□ -1.19
CSDE1-215ENST00000533818 MRPL3P09001 348 aaKnown RBP7.59□□□□□ -1.19
CSDE1-215ENST00000533818 TMEM225BP0DP42 221 aa7.59□□□□□ -1.19
CSDE1-215ENST00000533818 DBTP11182 482 aaKnown RBP7.59□□□□□ -1.19
CSDE1-215ENST00000533818 ACTR3P61158 418 aa7.59□□□□□ -1.19
CSDE1-215ENST00000533818 RHOGP84095 191 aa7.59□□□□□ -1.19
CSDE1-215ENST00000533818 TMEM30BQ3MIR4 351 aa7.59□□□□□ -1.19
CSDE1-215ENST00000533818 ASCL4Q6XD76 172 aa7.59□□□□□ -1.19
CSDE1-215ENST00000533818 ZNF833PQ6ZTB9 187 aa7.59□□□□□ -1.19
CSDE1-215ENST00000533818 GPHB5Q86YW7 130 aa7.59□□□□□ -1.19
CSDE1-215ENST00000533818 APRG1Q8IVJ8 170 aa7.59□□□□□ -1.19
CSDE1-215ENST00000533818 PRR18Q8N4B5 295 aa7.59□□□□□ -1.19
CSDE1-215ENST00000533818 IQCF1Q8N6M8 205 aa7.59□□□□□ -1.19
CSDE1-215ENST00000533818 SUMF2Q8NBJ7 301 aa7.59□□□□□ -1.19
CSDE1-215ENST00000533818 CCDC54Q8NEL0 328 aa7.59□□□□□ -1.19
CSDE1-215ENST00000533818 SPSB1Q96BD6 273 aa7.59□□□□□ -1.19
CSDE1-215ENST00000533818 ABHD14AQ9BUJ0 271 aa7.59□□□□□ -1.19
CSDE1-215ENST00000533818 RNF167Q9H6Y7 350 aa7.59□□□□□ -1.19
CSDE1-215ENST00000533818 NKIRAS1Q9NYS0 192 aa7.59□□□□□ -1.19
CSDE1-215ENST00000533818 MAGEL2Q9UJ55 1249 aa7.59□□□□□ -1.19
CSDE1-215ENST00000533818 DMRT1Q9Y5R6 373 aa7.59□□□□□ -1.19
CSDE1-215ENST00000533818 FAM223BA6NKX1 122 aa7.58□□□□□ -1.2
CSDE1-215ENST00000533818 FAM90A23PA8MXZ1 464 aa7.58□□□□□ -1.2
CSDE1-215ENST00000533818 TGOLN2O43493 480 aa7.58□□□□□ -1.2
CSDE1-215ENST00000533818 RBBP9O75884 186 aa7.58□□□□□ -1.2
CSDE1-215ENST00000533818 CA1P00915 261 aaPredicted RBP7.58□□□□□ -1.2
CSDE1-215ENST00000533818 APELAP0DMC3 54 aa7.58□□□□□ -1.2
CSDE1-215ENST00000533818 ZNF20P17024 532 aa7.58□□□□□ -1.2
CSDE1-215ENST00000533818 ADARB1P78563 741 aaKnown RBP7.58□□□□□ -1.2
CSDE1-215ENST00000533818 MED21Q13503 144 aa7.58□□□□□ -1.2
CSDE1-215ENST00000533818 C12orf74Q32Q52 190 aa7.58□□□□□ -1.2
CSDE1-215ENST00000533818 FAM106AQ4KMX7 169 aa7.58□□□□□ -1.2
CSDE1-215ENST00000533818 MORN2Q502X0 79 aa7.58□□□□□ -1.2
CSDE1-215ENST00000533818 SLC35D3Q5M8T2 416 aa7.58□□□□□ -1.2
CSDE1-215ENST00000533818 C6orf141Q5SZD1 244 aa7.58□□□□□ -1.2
CSDE1-215ENST00000533818 OR4A47Q6IF82 309 aa7.58□□□□□ -1.2
CSDE1-215ENST00000533818 ZNF322Q6U7Q0 402 aaPredicted RBP7.58□□□□□ -1.2
CSDE1-215ENST00000533818 UTS2BQ765I0 119 aa7.58□□□□□ -1.2
CSDE1-215ENST00000533818 CPOQ8IVL8 374 aa7.58□□□□□ -1.2
CSDE1-215ENST00000533818 FAM223AQ8IWN6 122 aa7.58□□□□□ -1.2
CSDE1-215ENST00000533818 SETD9Q8NE22 299 aa7.58□□□□□ -1.2
CSDE1-215ENST00000533818 ADAT3Q96EY9 351 aaPredicted RBP7.58□□□□□ -1.2
CSDE1-215ENST00000533818 RNF5Q99942 180 aa7.58□□□□□ -1.2
CSDE1-215ENST00000533818 ALG8Q9BVK2 526 aa7.58□□□□□ -1.2
CSDE1-215ENST00000533818 RAB9BQ9NP90 201 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms