RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 ZNF695Q8IW36 515 aa12.16□□□□□ -0.46
CPSF1-211ENST00000533492 OR2AK2Q8NG84 335 aa12.16□□□□□ -0.46
CPSF1-211ENST00000533492 OR6M1Q8NGM8 313 aa12.16□□□□□ -0.46
CPSF1-211ENST00000533492 SETD6Q8TBK2 473 aa12.16□□□□□ -0.46
CPSF1-211ENST00000533492 IL1F10Q8WWZ1 152 aa12.16□□□□□ -0.46
CPSF1-211ENST00000533492 NICN1Q9BSH3 213 aa12.16□□□□□ -0.46
CPSF1-211ENST00000533492 URM1Q9BTM9 101 aaKnown RBP12.16□□□□□ -0.46
CPSF1-211ENST00000533492 TM2D1Q9BX74 207 aa12.16□□□□□ -0.46
CPSF1-211ENST00000533492 DUSP21Q9H596 190 aa12.16□□□□□ -0.46
CPSF1-211ENST00000533492 STEAP1Q9UHE8 339 aa12.16□□□□□ -0.46
CPSF1-211ENST00000533492 TMEM14DPA8MWL7 114 aa12.15□□□□□ -0.46
CPSF1-211ENST00000533492 ARL6IP5O75915 188 aa12.15□□□□□ -0.46
CPSF1-211ENST00000533492 BPNT1O95861 308 aa12.15□□□□□ -0.46
CPSF1-211ENST00000533492 VDAC1P21796 283 aa12.15□□□□□ -0.46
CPSF1-211ENST00000533492 MYF6P23409 242 aa12.15□□□□□ -0.46
CPSF1-211ENST00000533492 UNC119Q13432 240 aa12.15□□□□□ -0.46
CPSF1-211ENST00000533492 TPBGQ13641 420 aa12.15□□□□□ -0.46
CPSF1-211ENST00000533492 MMDQ15546 238 aa12.15□□□□□ -0.46
CPSF1-211ENST00000533492 HMGN3Q15651 99 aa12.15□□□□□ -0.46
CPSF1-211ENST00000533492 LY6G6FQ5SQ64 297 aa12.15□□□□□ -0.46
CPSF1-211ENST00000533492 ETV3LQ6ZN32 361 aa12.15□□□□□ -0.46
CPSF1-211ENST00000533492 FAM71E2Q8N5Q1 922 aa12.15□□□□□ -0.46
CPSF1-211ENST00000533492 RBMXL1Q96E39 390 aaKnown RBP12.15□□□□□ -0.46
CPSF1-211ENST00000533492 MCRIP2Q9BUT9 160 aaKnown RBP12.15□□□□□ -0.46
CPSF1-211ENST00000533492 VCX3BQ9H321 246 aa12.15□□□□□ -0.46
CPSF1-211ENST00000533492 KCNK15Q9H427 330 aa12.15□□□□□ -0.46
CPSF1-211ENST00000533492 ISYNA1Q9NPH2 558 aa12.15□□□□□ -0.46
CPSF1-211ENST00000533492 RPLP1P05386 114 aaKnown RBP12.14□□□□□ -0.47
CPSF1-211ENST00000533492 ELANEP08246 267 aa12.14□□□□□ -0.47
CPSF1-211ENST00000533492 CD37P11049 281 aa12.14□□□□□ -0.47
CPSF1-211ENST00000533492 SLC2A2P11168 524 aaPredicted RBP12.14□□□□□ -0.47
CPSF1-211ENST00000533492 ARSBP15848 533 aa12.14□□□□□ -0.47
CPSF1-211ENST00000533492 PSMA1P25786 263 aaKnown RBP12.14□□□□□ -0.47
CPSF1-211ENST00000533492 RPS25P62851 125 aaKnown RBP12.14□□□□□ -0.47
CPSF1-211ENST00000533492 QRFPP83859 136 aa12.14□□□□□ -0.47
CPSF1-211ENST00000533492 FOXE3Q13461 319 aa12.14□□□□□ -0.47
CPSF1-211ENST00000533492 P2RY14Q15391 338 aa12.14□□□□□ -0.47
CPSF1-211ENST00000533492 ODF3L1Q8IXM7 274 aa12.14□□□□□ -0.47
CPSF1-211ENST00000533492 NABP2Q9BQ15 211 aa12.14□□□□□ -0.47
CPSF1-211ENST00000533492 HSPB9Q9BQS6 159 aa12.14□□□□□ -0.47
CPSF1-211ENST00000533492 ZNF251Q9BRH9 671 aa12.14□□□□□ -0.47
CPSF1-211ENST00000533492 MRPL20Q9BYC9 149 aaKnown RBP12.14□□□□□ -0.47
CPSF1-211ENST00000533492 RIMS4Q9H426 269 aaPredicted RBP12.14□□□□□ -0.47
CPSF1-211ENST00000533492 ZNF107Q9UII5 783 aaPredicted RBP12.14□□□□□ -0.47
CPSF1-211ENST00000533492 AK6Q9Y3D8 172 aaKnown RBP12.14□□□□□ -0.47
CPSF1-211ENST00000533492 NAPSAO96009 420 aa12.13□□□□□ -0.47
CPSF1-211ENST00000533492 OR5H8P0DN80 308 aa12.13□□□□□ -0.47
CPSF1-211ENST00000533492 HOXD3P31249 432 aaPredicted RBP12.13□□□□□ -0.47
CPSF1-211ENST00000533492 RANBP1P43487 201 aa12.13□□□□□ -0.47
CPSF1-211ENST00000533492 OR3A3P47888 321 aa12.13□□□□□ -0.47
CPSF1-211ENST00000533492 RAB25P57735 213 aa12.13□□□□□ -0.47
CPSF1-211ENST00000533492 ACTBP60709 375 aa12.13□□□□□ -0.47
CPSF1-211ENST00000533492 MLLT11Q13015 90 aaPredicted RBP12.13□□□□□ -0.47
CPSF1-211ENST00000533492 DEFB121Q5J5C9 76 aa12.13□□□□□ -0.47
CPSF1-211ENST00000533492 TMEM91Q6ZNR0 172 aa12.13□□□□□ -0.47
CPSF1-211ENST00000533492 MOB1BQ7L9L4 216 aa12.13□□□□□ -0.47
CPSF1-211ENST00000533492 SVOPQ8N4V2 548 aa12.13□□□□□ -0.47
CPSF1-211ENST00000533492 MGLLQ99685 303 aa12.13□□□□□ -0.47
CPSF1-211ENST00000533492 ANKRD60Q9BZ19 345 aa12.13□□□□□ -0.47
CPSF1-211ENST00000533492 LPAR5Q9H1C0 372 aa12.13□□□□□ -0.47
CPSF1-211ENST00000533492 PIPOXQ9P0Z9 390 aa12.13□□□□□ -0.47
CPSF1-211ENST00000533492 SAA2-SAA4A0A096LPE2 208 aa12.12□□□□□ -0.47
CPSF1-211ENST00000533492 CCL24O00175 119 aa12.12□□□□□ -0.47
CPSF1-211ENST00000533492 SLC17A2O00624 439 aa12.12□□□□□ -0.47
CPSF1-211ENST00000533492 SOCS1O15524 211 aa12.12□□□□□ -0.47
CPSF1-211ENST00000533492 SAA2P0DJI9 122 aaPredicted RBP12.12□□□□□ -0.47
CPSF1-211ENST00000533492 CPEP16870 476 aa12.12□□□□□ -0.47
CPSF1-211ENST00000533492 CRHBPP24387 322 aa12.12□□□□□ -0.47
CPSF1-211ENST00000533492 CALRP27797 417 aaKnown RBP12.12□□□□□ -0.47
CPSF1-211ENST00000533492 CDX1P47902 265 aaPredicted RBP12.12□□□□□ -0.47
CPSF1-211ENST00000533492 KRTAP10-11P60412 298 aa12.12□□□□□ -0.47
CPSF1-211ENST00000533492 RAB11BQ15907 218 aa12.12□□□□□ -0.47
CPSF1-211ENST00000533492 LCNL1Q6ZST4 164 aa12.12□□□□□ -0.47
CPSF1-211ENST00000533492 ZNF833PQ6ZTB9 187 aa12.12□□□□□ -0.47
CPSF1-211ENST00000533492 PRSS48Q7RTY5 328 aa12.12□□□□□ -0.47
CPSF1-211ENST00000533492 DUX3Q96PT4 197 aa12.12□□□□□ -0.47
CPSF1-211ENST00000533492 P2RX4Q99571 388 aa12.12□□□□□ -0.47
CPSF1-211ENST00000533492 KIAA1456Q9P272 454 aa12.12□□□□□ -0.47
CPSF1-211ENST00000533492 A0A0A6YYD4 124 aa12.11□□□□□ -0.47
CPSF1-211ENST00000533492 K7EIL1 84 aa12.11□□□□□ -0.47
CPSF1-211ENST00000533492 RAB29O14966 203 aa12.11□□□□□ -0.47
CPSF1-211ENST00000533492 NBR2O15453 112 aa12.11□□□□□ -0.47
CPSF1-211ENST00000533492 ST8SIA5O15466 376 aa12.11□□□□□ -0.47
CPSF1-211ENST00000533492 HSPA12AO43301 675 aa12.11□□□□□ -0.47
CPSF1-211ENST00000533492 IGHG4P01861 327 aa12.11□□□□□ -0.47
CPSF1-211ENST00000533492 IGF1P05019 195 aa12.11□□□□□ -0.47
CPSF1-211ENST00000533492 MAP2K4P45985 399 aa12.11□□□□□ -0.47
CPSF1-211ENST00000533492 HSPA13P48723 471 aa12.11□□□□□ -0.47
CPSF1-211ENST00000533492 PSMD7P51665 324 aa12.11□□□□□ -0.47
CPSF1-211ENST00000533492 FAM71F2Q6NXP2 309 aa12.11□□□□□ -0.47
CPSF1-211ENST00000533492 ZNF880Q6PDB4 577 aa12.11□□□□□ -0.47
CPSF1-211ENST00000533492 FAM89BQ8N5H3 189 aa12.11□□□□□ -0.47
CPSF1-211ENST00000533492 OR8U1Q8NH10 309 aa12.11□□□□□ -0.47
CPSF1-211ENST00000533492 RAX2Q96IS3 184 aa12.11□□□□□ -0.47
CPSF1-211ENST00000533492 RITA1Q96K30 269 aa12.11□□□□□ -0.47
CPSF1-211ENST00000533492 KCTD7Q96MP8 289 aa12.11□□□□□ -0.47
CPSF1-211ENST00000533492 GFI1Q99684 422 aa12.11□□□□□ -0.47
CPSF1-211ENST00000533492 CHCHD6Q9BRQ6 235 aa12.11□□□□□ -0.47
CPSF1-211ENST00000533492 ACOT13Q9NPJ3 140 aa12.11□□□□□ -0.47
CPSF1-211ENST00000533492 ZMAT5Q9UDW3 170 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms