RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 HSF4Q9ULV5 492 aa24■■□□□ 1.43
SSSCA1-207ENST00000533115 TRDV1A0A1B0GX56 115 aa23.99■■□□□ 1.43
SSSCA1-207ENST00000533115 A0A1W2PRX2 142 aa23.99■■□□□ 1.43
SSSCA1-207ENST00000533115 TCRBV4S1A1TA0A5B7 111 aa23.99■■□□□ 1.43
SSSCA1-207ENST00000533115 NCBP2LA6PVI3 153 aaKnown RBP23.99■■□□□ 1.43
SSSCA1-207ENST00000533115 HES5Q5TA89 166 aa23.99■■□□□ 1.43
SSSCA1-207ENST00000533115 UBE2UQ5VVX9 321 aa23.99■■□□□ 1.43
SSSCA1-207ENST00000533115 MOB1BQ7L9L4 216 aa23.99■■□□□ 1.43
SSSCA1-207ENST00000533115 SETD6Q8TBK2 473 aa23.99■■□□□ 1.43
SSSCA1-207ENST00000533115 TSSC4Q9Y5U2 329 aaPredicted RBP23.99■■□□□ 1.43
SSSCA1-207ENST00000533115 TRBV6-6A0A0A6YYG2 114 aa23.98■■□□□ 1.43
SSSCA1-207ENST00000533115 LDLRAD4O15165 306 aa23.98■■□□□ 1.43
SSSCA1-207ENST00000533115 VEGFCP49767 419 aa23.98■■□□□ 1.43
SSSCA1-207ENST00000533115 TMEM50BP56557 158 aa23.98■■□□□ 1.43
SSSCA1-207ENST00000533115 PDLIM3Q53GG5 364 aaPredicted RBP23.98■■□□□ 1.43
SSSCA1-207ENST00000533115 SPARTQ8N0X7 666 aa23.98■■□□□ 1.43
SSSCA1-207ENST00000533115 IL1F10Q8WWZ1 152 aa23.98■■□□□ 1.43
SSSCA1-207ENST00000533115 YTHDF1Q9BYJ9 559 aaKnown RBP23.98■■□□□ 1.43
SSSCA1-207ENST00000533115 SHISA3A0PJX4 238 aa23.97■■□□□ 1.43
SSSCA1-207ENST00000533115 PSMB11A5LHX3 300 aa23.97■■□□□ 1.43
SSSCA1-207ENST00000533115 IGHG2P01859 326 aa23.97■■□□□ 1.43
SSSCA1-207ENST00000533115 GALP22466 123 aa23.97■■□□□ 1.43
SSSCA1-207ENST00000533115 MYL9P24844 172 aa23.97■■□□□ 1.43
SSSCA1-207ENST00000533115 SLC35E3Q7Z769 313 aa23.97■■□□□ 1.43
SSSCA1-207ENST00000533115 ODF3L1Q8IXM7 274 aa23.97■■□□□ 1.43
SSSCA1-207ENST00000533115 Q8N9W7 124 aa23.97■■□□□ 1.43
SSSCA1-207ENST00000533115 OR56B1Q8NGI3 324 aa23.97■■□□□ 1.43
SSSCA1-207ENST00000533115 HDHD3Q9BSH5 251 aaPredicted RBP23.97■■□□□ 1.43
SSSCA1-207ENST00000533115 PLXNB1O43157 2135 aa23.96■■□□□ 1.43
SSSCA1-207ENST00000533115 TMEM272A0A1B0GTI8 110 aa23.96■■□□□ 1.43
SSSCA1-207ENST00000533115 SERPINE3A8MV23 424 aa23.96■■□□□ 1.43
SSSCA1-207ENST00000533115 OR10A3P58181 314 aa23.96■■□□□ 1.43
SSSCA1-207ENST00000533115 OR2AK2Q8NG84 335 aa23.96■■□□□ 1.43
SSSCA1-207ENST00000533115 CHPT1Q8WUD6 406 aa23.96■■□□□ 1.43
SSSCA1-207ENST00000533115 ARHGAP5-AS1Q96IT6 56 aa23.96■■□□□ 1.43
SSSCA1-207ENST00000533115 NOL4LQ96MY1 436 aaPredicted RBP23.96■■□□□ 1.43
SSSCA1-207ENST00000533115 PECRQ9BY49 303 aa23.96■■□□□ 1.43
SSSCA1-207ENST00000533115 PLSCR3Q9NRY6 295 aa23.96■■□□□ 1.43
SSSCA1-207ENST00000533115 LIN7CQ9NUP9 197 aaKnown RBP23.96■■□□□ 1.43
SSSCA1-207ENST00000533115 G3V4G9 280 aa23.95■■□□□ 1.42
SSSCA1-207ENST00000533115 LSAMPQ13449 338 aa23.95■■□□□ 1.42
SSSCA1-207ENST00000533115 OR8H1Q8NGG4 311 aa23.95■■□□□ 1.42
SSSCA1-207ENST00000533115 ABCG5Q9H222 651 aa23.95■■□□□ 1.42
SSSCA1-207ENST00000533115 RAB22AQ9UL26 194 aa23.95■■□□□ 1.42
SSSCA1-207ENST00000533115 PSMB9P28065 219 aa23.94■■□□□ 1.42
SSSCA1-207ENST00000533115 PLA2G7Q13093 441 aa23.94■■□□□ 1.42
SSSCA1-207ENST00000533115 C22orf42Q6IC83 251 aa23.94■■□□□ 1.42
SSSCA1-207ENST00000533115 ZNF329Q86UD4 541 aa23.94■■□□□ 1.42
SSSCA1-207ENST00000533115 FOXRED2Q8IWF2 684 aa23.94■■□□□ 1.42
SSSCA1-207ENST00000533115 FCGR1BQ92637 280 aa23.94■■□□□ 1.42
SSSCA1-207ENST00000533115 RBMXL1Q96E39 390 aaKnown RBP23.94■■□□□ 1.42
SSSCA1-207ENST00000533115 S1PR3Q99500 378 aa23.94■■□□□ 1.42
SSSCA1-207ENST00000533115 C12orf4Q9NQ89 552 aa23.94■■□□□ 1.42
SSSCA1-207ENST00000533115 MGAT4AQ9UM21 535 aa23.94■■□□□ 1.42
SSSCA1-207ENST00000533115 IFITM5A6NNB3 132 aa23.93■■□□□ 1.42
SSSCA1-207ENST00000533115 RAB3BP20337 219 aa23.93■■□□□ 1.42
SSSCA1-207ENST00000533115 PLAC9Q5JTB6 97 aa23.93■■□□□ 1.42
SSSCA1-207ENST00000533115 SAMD5Q5TGI4 173 aa23.93■■□□□ 1.42
SSSCA1-207ENST00000533115 ZNF833PQ6ZTB9 187 aa23.93■■□□□ 1.42
SSSCA1-207ENST00000533115 RASL11BQ9BPW5 248 aa23.93■■□□□ 1.42
SSSCA1-207ENST00000533115 IFI27L2Q9H2X8 130 aa23.93■■□□□ 1.42
SSSCA1-207ENST00000533115 LINC00527Q9UJ94 153 aa23.93■■□□□ 1.42
SSSCA1-207ENST00000533115 LINC01548A6NM66 108 aa23.92■■□□□ 1.42
SSSCA1-207ENST00000533115 GPR12P47775 334 aa23.92■■□□□ 1.42
SSSCA1-207ENST00000533115 OR3A3P47888 321 aa23.92■■□□□ 1.42
SSSCA1-207ENST00000533115 F2RL1P55085 397 aa23.92■■□□□ 1.42
SSSCA1-207ENST00000533115 HLA-DRB3P79483 266 aa23.92■■□□□ 1.42
SSSCA1-207ENST00000533115 KHDC1LQ5JSQ8 128 aa23.92■■□□□ 1.42
SSSCA1-207ENST00000533115 CMSS1Q9BQ75 279 aaKnown RBP23.92■■□□□ 1.42
SSSCA1-207ENST00000533115 MRPL20Q9BYC9 149 aaKnown RBP23.92■■□□□ 1.42
SSSCA1-207ENST00000533115 Q9N2K0 584 aa23.92■■□□□ 1.42
SSSCA1-207ENST00000533115 SAA2-SAA4A0A096LPE2 208 aa23.91■■□□□ 1.42
SSSCA1-207ENST00000533115 SAA2P0DJI9 122 aaPredicted RBP23.91■■□□□ 1.42
SSSCA1-207ENST00000533115 PF4V1P10720 104 aa23.91■■□□□ 1.42
SSSCA1-207ENST00000533115 STPG2Q8N412 459 aa23.91■■□□□ 1.42
SSSCA1-207ENST00000533115 FAM71E2Q8N5Q1 922 aa23.91■■□□□ 1.42
SSSCA1-207ENST00000533115 NABP2Q9BQ15 211 aa23.91■■□□□ 1.42
SSSCA1-207ENST00000533115 ST8SIA5O15466 376 aa23.9■■□□□ 1.42
SSSCA1-207ENST00000533115 BEAN1Q3B7T3 259 aa23.9■■□□□ 1.42
SSSCA1-207ENST00000533115 PIPOXQ9P0Z9 390 aa23.9■■□□□ 1.42
SSSCA1-207ENST00000533115 SLC23A1Q9UHI7 598 aa23.9■■□□□ 1.42
SSSCA1-207ENST00000533115 NOTCH3Q9UM47 2321 aa23.89■■□□□ 1.42
SSSCA1-207ENST00000533115 AP4M1O00189 453 aa23.89■■□□□ 1.41
SSSCA1-207ENST00000533115 FGF9P31371 208 aaPredicted RBP23.89■■□□□ 1.41
SSSCA1-207ENST00000533115 SLC35B1P78383 322 aa23.89■■□□□ 1.41
SSSCA1-207ENST00000533115 FAM71F2Q6NXP2 309 aa23.89■■□□□ 1.41
SSSCA1-207ENST00000533115 ZNF773Q6PK81 442 aa23.89■■□□□ 1.41
SSSCA1-207ENST00000533115 TXNL4BQ9NX01 149 aaKnown RBP23.89■■□□□ 1.41
SSSCA1-207ENST00000533115 ITGB1BP1O14713 200 aa23.88■■□□□ 1.41
SSSCA1-207ENST00000533115 RAB29O14966 203 aa23.88■■□□□ 1.41
SSSCA1-207ENST00000533115 SCTP09683 121 aa23.88■■□□□ 1.41
SSSCA1-207ENST00000533115 RAB6AP20340 208 aa23.88■■□□□ 1.41
SSSCA1-207ENST00000533115 ZBTB25P24278 435 aa23.88■■□□□ 1.41
SSSCA1-207ENST00000533115 MOGAT2Q3SYC2 334 aa23.88■■□□□ 1.41
SSSCA1-207ENST00000533115 KPRPQ5T749 579 aaPredicted RBP23.88■■□□□ 1.41
SSSCA1-207ENST00000533115 NR2C2APQ86WQ0 139 aa23.88■■□□□ 1.41
SSSCA1-207ENST00000533115 RAB3CQ96E17 227 aa23.88■■□□□ 1.41
SSSCA1-207ENST00000533115 PARP12Q9H0J9 701 aaKnown RBP23.88■■□□□ 1.41
SSSCA1-207ENST00000533115 OR1A1Q9P1Q5 309 aa23.88■■□□□ 1.41
SSSCA1-207ENST00000533115 STUB1Q9UNE7 303 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms