RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 ZNF497Q6ZNH5 498 aa13.37□□□□□ -0.27
PKP3-209ENST00000533069 KLHDC1Q8N7A1 406 aa13.37□□□□□ -0.27
PKP3-209ENST00000533069 SOSTQ9BQB4 213 aa13.37□□□□□ -0.27
PKP3-209ENST00000533069 CCDC32Q9BV29 185 aa13.37□□□□□ -0.27
PKP3-209ENST00000533069 SCPEP1Q9HB40 452 aa13.37□□□□□ -0.27
PKP3-209ENST00000533069 RAB9BQ9NP90 201 aa13.37□□□□□ -0.27
PKP3-209ENST00000533069 J3QR06 171 aa13.36□□□□□ -0.27
PKP3-209ENST00000533069 ORC5O43913 435 aa13.36□□□□□ -0.27
PKP3-209ENST00000533069 PDCD6O75340 191 aa13.36□□□□□ -0.27
PKP3-209ENST00000533069 BLVRBP30043 206 aaPredicted RBP13.36□□□□□ -0.27
PKP3-209ENST00000533069 PPP5CP53041 499 aa13.36□□□□□ -0.27
PKP3-209ENST00000533069 TAS2R20P59543 309 aa13.36□□□□□ -0.27
PKP3-209ENST00000533069 OR52M1Q8NGK5 317 aa13.36□□□□□ -0.27
PKP3-209ENST00000533069 RFESDQ8TAC1 157 aa13.36□□□□□ -0.27
PKP3-209ENST00000533069 CAPSLQ8WWF8 208 aa13.36□□□□□ -0.27
PKP3-209ENST00000533069 V9GYH0 126 aa13.36□□□□□ -0.27
PKP3-209ENST00000533069 TRAV39A0A0B4J263 110 aa13.35□□□□□ -0.27
PKP3-209ENST00000533069 FOXI3A8MTJ6 420 aaPredicted RBP13.35□□□□□ -0.27
PKP3-209ENST00000533069 MT-ND4P03905 459 aa13.35□□□□□ -0.27
PKP3-209ENST00000533069 HIST1H1DP16402 221 aaKnown RBP13.35□□□□□ -0.27
PKP3-209ENST00000533069 SSBP1Q04837 148 aaKnown RBP13.35□□□□□ -0.27
PKP3-209ENST00000533069 MADCAM1Q13477 382 aa13.35□□□□□ -0.27
PKP3-209ENST00000533069 TMEM30BQ3MIR4 351 aa13.35□□□□□ -0.27
PKP3-209ENST00000533069 UTF1Q5T230 341 aa13.35□□□□□ -0.27
PKP3-209ENST00000533069 HACD4Q5VWC8 232 aa13.35□□□□□ -0.27
PKP3-209ENST00000533069 MFSD4AQ8N468 514 aa13.35□□□□□ -0.27
PKP3-209ENST00000533069 TOMM40LQ969M1 308 aa13.35□□□□□ -0.27
PKP3-209ENST00000533069 RPEQ96AT9 228 aa13.35□□□□□ -0.27
PKP3-209ENST00000533069 RIMS4Q9H426 269 aaPredicted RBP13.35□□□□□ -0.27
PKP3-209ENST00000533069 KCNK15Q9H427 330 aa13.35□□□□□ -0.27
PKP3-209ENST00000533069 SERTAD4Q9NUC0 356 aa13.35□□□□□ -0.27
PKP3-209ENST00000533069 PLEKHJ1Q9NW61 149 aa13.35□□□□□ -0.27
PKP3-209ENST00000533069 ETAA1Q9NY74 926 aa13.35□□□□□ -0.27
PKP3-209ENST00000533069 PSG11Q9UQ72 335 aa13.35□□□□□ -0.27
PKP3-209ENST00000533069 TRAV18A0A075B6X5 111 aa13.34□□□□□ -0.27
PKP3-209ENST00000533069 C15orf65H3BRN8 121 aa13.34□□□□□ -0.27
PKP3-209ENST00000533069 CHATP28329 748 aa13.34□□□□□ -0.27
PKP3-209ENST00000533069 PRSS3P35030 304 aa13.34□□□□□ -0.27
PKP3-209ENST00000533069 CBX5P45973 191 aa13.34□□□□□ -0.27
PKP3-209ENST00000533069 MRPS15P82914 257 aaKnown RBP13.34□□□□□ -0.27
PKP3-209ENST00000533069 LTC4SQ16873 150 aa13.34□□□□□ -0.27
PKP3-209ENST00000533069 Q3ZCU0 254 aa13.34□□□□□ -0.27
PKP3-209ENST00000533069 ARSJQ5FYB0 599 aaPredicted RBP13.34□□□□□ -0.27
PKP3-209ENST00000533069 C6orf183Q5T699 404 aa13.34□□□□□ -0.27
PKP3-209ENST00000533069 TRAT1Q6PIZ9 186 aa13.34□□□□□ -0.27
PKP3-209ENST00000533069 GAPTQ8N292 157 aa13.34□□□□□ -0.27
PKP3-209ENST00000533069 C8orf31Q8N9H6 132 aa13.34□□□□□ -0.27
PKP3-209ENST00000533069 DEDD2Q8WXF8 326 aa13.34□□□□□ -0.27
PKP3-209ENST00000533069 CFHR4Q92496 578 aa13.34□□□□□ -0.27
PKP3-209ENST00000533069 ARL11Q969Q4 196 aa13.34□□□□□ -0.27
PKP3-209ENST00000533069 NICN1Q9BSH3 213 aa13.34□□□□□ -0.27
PKP3-209ENST00000533069 AUNIPQ9H7T9 357 aa13.34□□□□□ -0.27
PKP3-209ENST00000533069 PALMDQ9NP74 551 aa13.34□□□□□ -0.27
PKP3-209ENST00000533069 GABARAPH6UMI1 98 aa13.33□□□□□ -0.28
PKP3-209ENST00000533069 SDCBPO00560 298 aaPredicted RBP13.33□□□□□ -0.28
PKP3-209ENST00000533069 MFNGO00587 321 aa13.33□□□□□ -0.28
PKP3-209ENST00000533069 SOCS1O15524 211 aa13.33□□□□□ -0.28
PKP3-209ENST00000533069 GSTZ1O43708 216 aaPredicted RBP13.33□□□□□ -0.28
PKP3-209ENST00000533069 PEX14O75381 377 aa13.33□□□□□ -0.28
PKP3-209ENST00000533069 OR2F2O95006 317 aa13.33□□□□□ -0.28
PKP3-209ENST00000533069 HLA-DQB1P01920 261 aa13.33□□□□□ -0.28
PKP3-209ENST00000533069 FAM106CPP0CH98 169 aa13.33□□□□□ -0.28
PKP3-209ENST00000533069 VSIG10L2P0DP72 767 aa13.33□□□□□ -0.28
PKP3-209ENST00000533069 GNG10P50151 68 aa13.33□□□□□ -0.28
PKP3-209ENST00000533069 RAB7AP51149 207 aa13.33□□□□□ -0.28
PKP3-209ENST00000533069 PLA2G7Q13093 441 aa13.33□□□□□ -0.28
PKP3-209ENST00000533069 ZNF260Q3ZCT1 412 aa13.33□□□□□ -0.28
PKP3-209ENST00000533069 CDNFQ49AH0 187 aa13.33□□□□□ -0.28
PKP3-209ENST00000533069 PYDC2Q56P42 97 aa13.33□□□□□ -0.28
PKP3-209ENST00000533069 OR10X1Q8NGY0 326 aa13.33□□□□□ -0.28
PKP3-209ENST00000533069 CCDC107Q8WV48 283 aa13.33□□□□□ -0.28
PKP3-209ENST00000533069 SMIM4Q8WVI0 70 aa13.33□□□□□ -0.28
PKP3-209ENST00000533069 LEAP2Q969E1 77 aa13.33□□□□□ -0.28
PKP3-209ENST00000533069 BORCS5Q969J3 196 aa13.33□□□□□ -0.28
PKP3-209ENST00000533069 RBM14Q96PK6 669 aaKnown RBP13.33□□□□□ -0.28
PKP3-209ENST00000533069 SLC25A33Q9BSK2 321 aa13.33□□□□□ -0.28
PKP3-209ENST00000533069 TAS2R8Q9NYW2 309 aa13.33□□□□□ -0.28
PKP3-209ENST00000533069 TRAPPC2LQ9UL33 140 aa13.33□□□□□ -0.28
PKP3-209ENST00000533069 MRPS7Q9Y2R9 242 aaKnown RBP13.33□□□□□ -0.28
PKP3-209ENST00000533069 A0A0A6YYD4 124 aa13.32□□□□□ -0.28
PKP3-209ENST00000533069 M0QZK8 103 aa13.32□□□□□ -0.28
PKP3-209ENST00000533069 SPINT2O43291 252 aa13.32□□□□□ -0.28
PKP3-209ENST00000533069 IGHV3-7P01780 117 aa13.32□□□□□ -0.28
PKP3-209ENST00000533069 CSF1P09603 554 aa13.32□□□□□ -0.28
PKP3-209ENST00000533069 CD24P25063 80 aa13.32□□□□□ -0.28
PKP3-209ENST00000533069 VDAC2P45880 294 aaPredicted RBP13.32□□□□□ -0.28
PKP3-209ENST00000533069 TMEM50BP56557 158 aa13.32□□□□□ -0.28
PKP3-209ENST00000533069 ACTBP60709 375 aa13.32□□□□□ -0.28
PKP3-209ENST00000533069 BLCAPP62952 87 aa13.32□□□□□ -0.28
PKP3-209ENST00000533069 HABP2Q14520 560 aaPredicted RBP13.32□□□□□ -0.28
PKP3-209ENST00000533069 THNSL2Q86YJ6 484 aa13.32□□□□□ -0.28
PKP3-209ENST00000533069 OR8H3Q8N146 312 aa13.32□□□□□ -0.28
PKP3-209ENST00000533069 Q8N402 240 aa13.32□□□□□ -0.28
PKP3-209ENST00000533069 LINC00311Q8N616 119 aa13.32□□□□□ -0.28
PKP3-209ENST00000533069 FCAMRQ8WWV6 532 aa13.32□□□□□ -0.28
PKP3-209ENST00000533069 PECRQ9BY49 303 aa13.32□□□□□ -0.28
PKP3-209ENST00000533069 SRRQ9GZT4 340 aa13.32□□□□□ -0.28
PKP3-209ENST00000533069 GFOD1Q9NXC2 390 aa13.32□□□□□ -0.28
PKP3-209ENST00000533069 ZNF107Q9UII5 783 aaPredicted RBP13.32□□□□□ -0.28
PKP3-209ENST00000533069 MGAT4AQ9UM21 535 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms