RNA–Protein interactions for RNA: ENST00000532925.5

ATPAF1-210, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-210ENST00000532925 SNAPINO95295 136 aa4.8□□□□□ -1.64
ATPAF1-210ENST00000532925 SCGB1D2O95969 90 aa4.8□□□□□ -1.64
ATPAF1-210ENST00000532925 IGHV3-13P01766 116 aa4.8□□□□□ -1.64
ATPAF1-210ENST00000532925 CD5P06127 495 aa4.8□□□□□ -1.64
ATPAF1-210ENST00000532925 SERPINE2P07093 398 aa4.8□□□□□ -1.64
ATPAF1-210ENST00000532925 ADH4P08319 380 aa4.8□□□□□ -1.64
ATPAF1-210ENST00000532925 OR8U8P0C7N1 319 aa4.8□□□□□ -1.64
ATPAF1-210ENST00000532925 PAX6P26367 422 aa4.8□□□□□ -1.64
ATPAF1-210ENST00000532925 GLRXP35754 106 aa4.8□□□□□ -1.64
ATPAF1-210ENST00000532925 MPV17P39210 176 aa4.8□□□□□ -1.64
ATPAF1-210ENST00000532925 DVL1P1P54792 670 aaPredicted RBP4.8□□□□□ -1.64
ATPAF1-210ENST00000532925 VAMP2P63027 116 aa4.8□□□□□ -1.64
ATPAF1-210ENST00000532925 SRSF3P84103 164 aaKnown RBP4.8□□□□□ -1.64
ATPAF1-210ENST00000532925 HTD2P86397 168 aa4.8□□□□□ -1.64
ATPAF1-210ENST00000532925 CATR1Q13166 79 aa4.8□□□□□ -1.64
ATPAF1-210ENST00000532925 ZNF273Q14593 569 aa4.8□□□□□ -1.64
ATPAF1-210ENST00000532925 PDCD1Q15116 288 aa4.8□□□□□ -1.64
ATPAF1-210ENST00000532925 TESK1Q15569 626 aa4.8□□□□□ -1.64
ATPAF1-210ENST00000532925 CR1LQ2VPA4 569 aa4.8□□□□□ -1.64
ATPAF1-210ENST00000532925 SP6Q3SY56 376 aa4.8□□□□□ -1.64
ATPAF1-210ENST00000532925 WDR82Q6UXN9 313 aa4.8□□□□□ -1.64
ATPAF1-210ENST00000532925 MEX3BQ6ZN04 569 aaKnown RBP4.8□□□□□ -1.64
ATPAF1-210ENST00000532925 ZNF66Q6ZN08 573 aa4.8□□□□□ -1.64
ATPAF1-210ENST00000532925 SEM1Q6ZVN7 128 aa4.8□□□□□ -1.64
ATPAF1-210ENST00000532925 CXorf67Q86X51 503 aaPredicted RBP4.8□□□□□ -1.64
ATPAF1-210ENST00000532925 C11orf53Q8IXP5 236 aa4.8□□□□□ -1.64
ATPAF1-210ENST00000532925 TMEM252Q8N6L7 170 aa4.8□□□□□ -1.64
ATPAF1-210ENST00000532925 ZNF645Q8N7E2 425 aa4.8□□□□□ -1.64
ATPAF1-210ENST00000532925 BPIFCQ8NFQ6 507 aa4.8□□□□□ -1.64
ATPAF1-210ENST00000532925 PLPPR1Q8TBJ4 325 aa4.8□□□□□ -1.64
ATPAF1-210ENST00000532925 FAM57AQ8TBR7 257 aa4.8□□□□□ -1.64
ATPAF1-210ENST00000532925 ERGIC1Q969X5 290 aa4.8□□□□□ -1.64
ATPAF1-210ENST00000532925 GALMQ96C23 342 aa4.8□□□□□ -1.64
ATPAF1-210ENST00000532925 NKX6-2Q9C056 277 aaPredicted RBP4.8□□□□□ -1.64
ATPAF1-210ENST00000532925 HEATR1Q9H583 2144 aaKnown RBP4.8□□□□□ -1.64
ATPAF1-210ENST00000532925 OR2S2Q9NQN1 319 aa4.8□□□□□ -1.64
ATPAF1-210ENST00000532925 CCL28Q9NRJ3 127 aa4.8□□□□□ -1.64
ATPAF1-210ENST00000532925 ERRFI1Q9UJM3 462 aaPredicted RBP4.8□□□□□ -1.64
ATPAF1-210ENST00000532925 TRAPPC2LQ9UL33 140 aa4.8□□□□□ -1.64
ATPAF1-210ENST00000532925 ZDHHC8Q9ULC8 765 aa4.8□□□□□ -1.64
ATPAF1-210ENST00000532925 RNF150Q9ULK6 438 aa4.8□□□□□ -1.64
ATPAF1-210ENST00000532925 WASF3Q9UPY6 502 aa4.8□□□□□ -1.64
ATPAF1-210ENST00000532925 RNF115Q9Y4L5 304 aa4.8□□□□□ -1.64
ATPAF1-210ENST00000532925 KPTNQ9Y664 436 aa4.8□□□□□ -1.64
ATPAF1-210ENST00000532925 A0A1W2PR80 420 aa4.79□□□□□ -1.64
ATPAF1-210ENST00000532925 FAM90A9PA6NNJ1 464 aa4.79□□□□□ -1.64
ATPAF1-210ENST00000532925 MKRN2OSH3BPM6 223 aa4.79□□□□□ -1.64
ATPAF1-210ENST00000532925 K7N7A8 449 aa4.79□□□□□ -1.64
ATPAF1-210ENST00000532925 SIRPB1O00241 398 aa4.79□□□□□ -1.64
ATPAF1-210ENST00000532925 WRBO00258 174 aa4.79□□□□□ -1.64
ATPAF1-210ENST00000532925 HSPB6O14558 160 aa4.79□□□□□ -1.64
ATPAF1-210ENST00000532925 TOR1AO14656 332 aa4.79□□□□□ -1.64
ATPAF1-210ENST00000532925 ABCD4O14678 606 aa4.79□□□□□ -1.64
ATPAF1-210ENST00000532925 HS3ST1O14792 307 aa4.79□□□□□ -1.64
ATPAF1-210ENST00000532925 MED6O75586 246 aa4.79□□□□□ -1.64
ATPAF1-210ENST00000532925 WISP2O76076 250 aa4.79□□□□□ -1.64
ATPAF1-210ENST00000532925 IGLV2-14P01704 120 aa4.79□□□□□ -1.64
ATPAF1-210ENST00000532925 APOC3P02656 99 aa4.79□□□□□ -1.64
ATPAF1-210ENST00000532925 RCC1P18754 421 aaPredicted RBP4.79□□□□□ -1.64
ATPAF1-210ENST00000532925 LPAR6P43657 344 aa4.79□□□□□ -1.64
ATPAF1-210ENST00000532925 ERVS71-1P61550 626 aa4.79□□□□□ -1.64
ATPAF1-210ENST00000532925 RPL23AP62750 156 aaKnown RBP4.79□□□□□ -1.64
ATPAF1-210ENST00000532925 NKX6-1P78426 367 aaPredicted RBP4.79□□□□□ -1.64
ATPAF1-210ENST00000532925 EIF4EBP1Q13541 118 aaPredicted RBP4.79□□□□□ -1.64
ATPAF1-210ENST00000532925 SPATA46Q5T0L3 261 aa4.79□□□□□ -1.64
ATPAF1-210ENST00000532925 Q6ZR03 302 aa4.79□□□□□ -1.64
ATPAF1-210ENST00000532925 Q6ZRG5 221 aa4.79□□□□□ -1.64
ATPAF1-210ENST00000532925 MRGPRGQ86SM5 289 aa4.79□□□□□ -1.64
ATPAF1-210ENST00000532925 STX12Q86Y82 276 aa4.79□□□□□ -1.64
ATPAF1-210ENST00000532925 FOXRED2Q8IWF2 684 aa4.79□□□□□ -1.64
ATPAF1-210ENST00000532925 RBMXL3Q8N7X1 1067 aaKnown RBP4.79□□□□□ -1.64
ATPAF1-210ENST00000532925 ZNF610Q8N9Z0 462 aa4.79□□□□□ -1.64
ATPAF1-210ENST00000532925 NUP37Q8NFH4 326 aa4.79□□□□□ -1.64
ATPAF1-210ENST00000532925 CD300LFQ8TDQ1 290 aa4.79□□□□□ -1.64
ATPAF1-210ENST00000532925 MUCL1Q96DR8 90 aa4.79□□□□□ -1.64
ATPAF1-210ENST00000532925 LRRC46Q96FV0 321 aa4.79□□□□□ -1.64
ATPAF1-210ENST00000532925 ZNF488Q96MN9 340 aa4.79□□□□□ -1.64
ATPAF1-210ENST00000532925 HSD17B10Q99714 261 aaKnown RBP4.79□□□□□ -1.64
ATPAF1-210ENST00000532925 PBDC1Q9BVG4 233 aa4.79□□□□□ -1.64
ATPAF1-210ENST00000532925 C1QTNF6Q9BXI9 259 aa4.79□□□□□ -1.64
ATPAF1-210ENST00000532925 OR51B6Q9H340 312 aa4.79□□□□□ -1.64
ATPAF1-210ENST00000532925 UQCC1Q9NVA1 299 aa4.79□□□□□ -1.64
ATPAF1-210ENST00000532925 JPT1Q9UK76 154 aa4.79□□□□□ -1.64
ATPAF1-210ENST00000532925 GAB2Q9UQC2 676 aa4.79□□□□□ -1.64
ATPAF1-210ENST00000532925 FAM215AQ9Y5M1 114 aa4.79□□□□□ -1.64
ATPAF1-210ENST00000532925 UNC79Q9P2D8 2635 aa4.78□□□□□ -1.64
ATPAF1-210ENST00000532925 PKD1L2Q7Z442 2459 aa4.78□□□□□ -1.64
ATPAF1-210ENST00000532925 URB1O60287 2271 aaKnown RBP4.78□□□□□ -1.64
ATPAF1-210ENST00000532925 DSCAML1Q8TD84 2053 aa4.78□□□□□ -1.64
ATPAF1-210ENST00000532925 TRAV1-1A0A0B4J248 108 aa4.78□□□□□ -1.64
ATPAF1-210ENST00000532925 IGSF23A1L1A6 192 aa4.78□□□□□ -1.64
ATPAF1-210ENST00000532925 A6NLC8 198 aa4.78□□□□□ -1.64
ATPAF1-210ENST00000532925 FAM157AC9JC47 383 aa4.78□□□□□ -1.64
ATPAF1-210ENST00000532925 HSD17B6O14756 317 aa4.78□□□□□ -1.64
ATPAF1-210ENST00000532925 MGST3O14880 152 aa4.78□□□□□ -1.64
ATPAF1-210ENST00000532925 SMAD7O15105 426 aaKnown RBP4.78□□□□□ -1.64
ATPAF1-210ENST00000532925 RBFOX2O43251 390 aaKnown RBP eCLIP4.78□□□□□ -1.64
ATPAF1-210ENST00000532925 SPINT2O43291 252 aa4.78□□□□□ -1.64
ATPAF1-210ENST00000532925 TXNL1O43396 289 aa4.78□□□□□ -1.64
ATPAF1-210ENST00000532925 SOX15O60248 233 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms