RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 OR51D1Q8NGF3 324 aa13.64□□□□□ -0.23
PHRF1-204ENST00000532550 OR8H1Q8NGG4 311 aa13.64□□□□□ -0.23
PHRF1-204ENST00000532550 IL1F10Q8WWZ1 152 aa13.64□□□□□ -0.23
PHRF1-204ENST00000532550 NOL4LQ96MY1 436 aaPredicted RBP13.64□□□□□ -0.23
PHRF1-204ENST00000532550 RASL11BQ9BPW5 248 aa13.64□□□□□ -0.23
PHRF1-204ENST00000532550 LIN7CQ9NUP9 197 aaKnown RBP13.64□□□□□ -0.23
PHRF1-204ENST00000532550 STEAP1Q9UHE8 339 aa13.64□□□□□ -0.23
PHRF1-204ENST00000532550 A0A0A6YYD4 124 aa13.63□□□□□ -0.23
PHRF1-204ENST00000532550 PDCD5O14737 125 aa13.63□□□□□ -0.23
PHRF1-204ENST00000532550 NAPSAO96009 420 aa13.63□□□□□ -0.23
PHRF1-204ENST00000532550 PF4P02776 101 aa13.63□□□□□ -0.23
PHRF1-204ENST00000532550 CD33P20138 364 aa13.63□□□□□ -0.23
PHRF1-204ENST00000532550 CLDN12P56749 244 aa13.63□□□□□ -0.23
PHRF1-204ENST00000532550 BEAN1Q3B7T3 259 aa13.63□□□□□ -0.23
PHRF1-204ENST00000532550 OR2AK2Q8NG84 335 aa13.63□□□□□ -0.23
PHRF1-204ENST00000532550 FAM3DQ96BQ1 224 aa13.63□□□□□ -0.23
PHRF1-204ENST00000532550 S1PR3Q99500 378 aa13.63□□□□□ -0.23
PHRF1-204ENST00000532550 ABCG5Q9H222 651 aa13.63□□□□□ -0.23
PHRF1-204ENST00000532550 PLSCR3Q9NRY6 295 aa13.63□□□□□ -0.23
PHRF1-204ENST00000532550 LINC00527Q9UJ94 153 aa13.63□□□□□ -0.23
PHRF1-204ENST00000532550 HSF4Q9ULV5 492 aa13.63□□□□□ -0.23
PHRF1-204ENST00000532550 MRPS14O60783 128 aaKnown RBP13.62□□□□□ -0.23
PHRF1-204ENST00000532550 VEGFCP49767 419 aa13.62□□□□□ -0.23
PHRF1-204ENST00000532550 SSX1Q16384 188 aa13.62□□□□□ -0.23
PHRF1-204ENST00000532550 OXLD1Q5BKU9 147 aa13.62□□□□□ -0.23
PHRF1-204ENST00000532550 ZNF880Q6PDB4 577 aa13.62□□□□□ -0.23
PHRF1-204ENST00000532550 MOB1BQ7L9L4 216 aa13.62□□□□□ -0.23
PHRF1-204ENST00000532550 SVOPQ8N4V2 548 aa13.62□□□□□ -0.23
PHRF1-204ENST00000532550 Q8N9W7 124 aa13.62□□□□□ -0.23
PHRF1-204ENST00000532550 WFDC9Q8NEX5 89 aa13.62□□□□□ -0.23
PHRF1-204ENST00000532550 GON7Q9BXV9 100 aa13.62□□□□□ -0.23
PHRF1-204ENST00000532550 Q9H521 79 aa13.62□□□□□ -0.23
PHRF1-204ENST00000532550 AK3Q9UIJ7 227 aa13.62□□□□□ -0.23
PHRF1-204ENST00000532550 TRAV1-2A0A0B4J238 106 aa13.61□□□□□ -0.23
PHRF1-204ENST00000532550 LINC01548A6NM66 108 aa13.61□□□□□ -0.23
PHRF1-204ENST00000532550 AP4M1O00189 453 aa13.61□□□□□ -0.23
PHRF1-204ENST00000532550 DENRO43583 198 aaKnown RBP13.61□□□□□ -0.23
PHRF1-204ENST00000532550 GPR12P47775 334 aa13.61□□□□□ -0.23
PHRF1-204ENST00000532550 F2RL1P55085 397 aa13.61□□□□□ -0.23
PHRF1-204ENST00000532550 GABARAPL2P60520 117 aa13.61□□□□□ -0.23
PHRF1-204ENST00000532550 LSAMPQ13449 338 aa13.61□□□□□ -0.23
PHRF1-204ENST00000532550 KPRPQ5T749 579 aaPredicted RBP13.61□□□□□ -0.23
PHRF1-204ENST00000532550 HES5Q5TA89 166 aa13.61□□□□□ -0.23
PHRF1-204ENST00000532550 STPG2Q8N412 459 aa13.61□□□□□ -0.23
PHRF1-204ENST00000532550 COMMD1Q8N668 190 aa13.61□□□□□ -0.23
PHRF1-204ENST00000532550 OR56B1Q8NGI3 324 aa13.61□□□□□ -0.23
PHRF1-204ENST00000532550 RAB22AQ9UL26 194 aa13.61□□□□□ -0.23
PHRF1-204ENST00000532550 MGAT4AQ9UM21 535 aa13.61□□□□□ -0.23
PHRF1-204ENST00000532550 TGP01266 2768 aa13.61□□□□□ -0.23
PHRF1-204ENST00000532550 TRBV6-6A0A0A6YYG2 114 aa13.6□□□□□ -0.23
PHRF1-204ENST00000532550 TRDV1A0A1B0GX56 115 aa13.6□□□□□ -0.23
PHRF1-204ENST00000532550 MYL9P24844 172 aa13.6□□□□□ -0.23
PHRF1-204ENST00000532550 OR3A3P47888 321 aa13.6□□□□□ -0.23
PHRF1-204ENST00000532550 TMEM50BP56557 158 aa13.6□□□□□ -0.23
PHRF1-204ENST00000532550 ODF3L1Q8IXM7 274 aa13.6□□□□□ -0.23
PHRF1-204ENST00000532550 ARHGAP5-AS1Q96IT6 56 aa13.6□□□□□ -0.23
PHRF1-204ENST00000532550 CMSS1Q9BQ75 279 aaKnown RBP13.6□□□□□ -0.23
PHRF1-204ENST00000532550 ZFP57Q9NU63 452 aa13.6□□□□□ -0.23
PHRF1-204ENST00000532550 NDUFB11Q9NX14 153 aa13.6□□□□□ -0.23
PHRF1-204ENST00000532550 PIPOXQ9P0Z9 390 aa13.6□□□□□ -0.23
PHRF1-204ENST00000532550 FOXI3A8MTJ6 420 aaPredicted RBP13.59□□□□□ -0.23
PHRF1-204ENST00000532550 HSPA12AO43301 675 aa13.59□□□□□ -0.23
PHRF1-204ENST00000532550 ZBTB25P24278 435 aa13.59□□□□□ -0.23
PHRF1-204ENST00000532550 SOX6P35712 828 aa13.59□□□□□ -0.23
PHRF1-204ENST00000532550 CEACAM6P40199 344 aa13.59□□□□□ -0.23
PHRF1-204ENST00000532550 RPL23AP62750 156 aaKnown RBP13.59□□□□□ -0.23
PHRF1-204ENST00000532550 MRPS15P82914 257 aaKnown RBP13.59□□□□□ -0.23
PHRF1-204ENST00000532550 PNLIPRP3Q17RR3 467 aa13.59□□□□□ -0.23
PHRF1-204ENST00000532550 TEX38Q6PEX7 206 aa13.59□□□□□ -0.23
PHRF1-204ENST00000532550 ZNF833PQ6ZTB9 187 aa13.59□□□□□ -0.23
PHRF1-204ENST00000532550 RBMXL1Q96E39 390 aaKnown RBP13.59□□□□□ -0.23
PHRF1-204ENST00000532550 NABP2Q9BQ15 211 aa13.59□□□□□ -0.23
PHRF1-204ENST00000532550 HDHD3Q9BSH5 251 aaPredicted RBP13.59□□□□□ -0.23
PHRF1-204ENST00000532550 PECRQ9BY49 303 aa13.59□□□□□ -0.23
PHRF1-204ENST00000532550 MRPL20Q9BYC9 149 aaKnown RBP13.59□□□□□ -0.23
PHRF1-204ENST00000532550 YTHDF1Q9BYJ9 559 aaKnown RBP13.59□□□□□ -0.23
PHRF1-204ENST00000532550 GHITMQ9H3K2 345 aa13.59□□□□□ -0.23
PHRF1-204ENST00000532550 SAA2-SAA4A0A096LPE2 208 aa13.58□□□□□ -0.24
PHRF1-204ENST00000532550 TMEM272A0A1B0GTI8 110 aa13.58□□□□□ -0.24
PHRF1-204ENST00000532550 RAB29O14966 203 aa13.58□□□□□ -0.24
PHRF1-204ENST00000532550 LDLRAD4O15165 306 aa13.58□□□□□ -0.24
PHRF1-204ENST00000532550 ST8SIA5O15466 376 aa13.58□□□□□ -0.24
PHRF1-204ENST00000532550 RRP9O43818 475 aaKnown RBP13.58□□□□□ -0.24
PHRF1-204ENST00000532550 SAA2P0DJI9 122 aaPredicted RBP13.58□□□□□ -0.24
PHRF1-204ENST00000532550 IGLL1P15814 213 aa13.58□□□□□ -0.24
PHRF1-204ENST00000532550 RAB3BP20337 219 aa13.58□□□□□ -0.24
PHRF1-204ENST00000532550 GALP22466 123 aa13.58□□□□□ -0.24
PHRF1-204ENST00000532550 MMDQ15546 238 aa13.58□□□□□ -0.24
PHRF1-204ENST00000532550 CD200R1LQ6Q8B3 271 aa13.58□□□□□ -0.24
PHRF1-204ENST00000532550 Q6ZPA2 131 aa13.58□□□□□ -0.24
PHRF1-204ENST00000532550 FAM71E2Q8N5Q1 922 aa13.58□□□□□ -0.24
PHRF1-204ENST00000532550 ZNF251Q9BRH9 671 aa13.58□□□□□ -0.24
PHRF1-204ENST00000532550 Q9N2K0 584 aa13.58□□□□□ -0.24
PHRF1-204ENST00000532550 C12orf4Q9NQ89 552 aa13.58□□□□□ -0.24
PHRF1-204ENST00000532550 SLC23A1Q9UHI7 598 aa13.58□□□□□ -0.24
PHRF1-204ENST00000532550 IFITM5A6NNB3 132 aa13.57□□□□□ -0.24
PHRF1-204ENST00000532550 NUDT19A8MXV4 375 aa13.57□□□□□ -0.24
PHRF1-204ENST00000532550 PRB2P02812 416 aaPredicted RBP13.57□□□□□ -0.24
PHRF1-204ENST00000532550 OR10A3P58181 314 aa13.57□□□□□ -0.24
PHRF1-204ENST00000532550 ACTBP60709 375 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 250.1 ms