RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 LRRC75BQ2VPJ9 315 aa12.36□□□□□ -0.43
CCS-206ENST00000530961 TPTE2P1Q5T6R2 138 aa12.36□□□□□ -0.43
CCS-206ENST00000530961 C5orf24Q7Z6I8 188 aa12.36□□□□□ -0.43
CCS-206ENST00000530961 DYNAPQ8N1N2 210 aa12.36□□□□□ -0.43
CCS-206ENST00000530961 NUDCD2Q8WVJ2 157 aa12.36□□□□□ -0.43
CCS-206ENST00000530961 RPEQ96AT9 228 aa12.36□□□□□ -0.43
CCS-206ENST00000530961 DGCR14Q96DF8 476 aaKnown RBP12.36□□□□□ -0.43
CCS-206ENST00000530961 SSX3Q99909 188 aa12.36□□□□□ -0.43
CCS-206ENST00000530961 HILPDAQ9Y5L2 63 aa12.36□□□□□ -0.43
CCS-206ENST00000530961 RGS5O15539 181 aa12.35□□□□□ -0.43
CCS-206ENST00000530961 SSX5O60225 188 aa12.35□□□□□ -0.43
CCS-206ENST00000530961 IGHV4-59P01825 116 aa12.35□□□□□ -0.43
CCS-206ENST00000530961 GSTT2P0CG29 244 aa12.35□□□□□ -0.43
CCS-206ENST00000530961 GSTT2BP0CG30 244 aa12.35□□□□□ -0.43
CCS-206ENST00000530961 PPP1CCP36873 323 aaKnown RBP12.35□□□□□ -0.43
CCS-206ENST00000530961 CEACAM6P40199 344 aa12.35□□□□□ -0.43
CCS-206ENST00000530961 RAB7AP51149 207 aa12.35□□□□□ -0.43
CCS-206ENST00000530961 ZNF134P52741 427 aa12.35□□□□□ -0.43
CCS-206ENST00000530961 GNMTQ14749 295 aa12.35□□□□□ -0.43
CCS-206ENST00000530961 CT45A1Q5HYN5 189 aa12.35□□□□□ -0.43
CCS-206ENST00000530961 C16orf87Q6PH81 154 aa12.35□□□□□ -0.43
CCS-206ENST00000530961 OR2AK2Q8NG84 335 aa12.35□□□□□ -0.43
CCS-206ENST00000530961 CT45A3Q8NHU0 189 aa12.35□□□□□ -0.43
CCS-206ENST00000530961 FAM216AQ8WUB2 273 aa12.35□□□□□ -0.43
CCS-206ENST00000530961 C15orf40Q8WUR7 153 aa12.35□□□□□ -0.43
CCS-206ENST00000530961 EDARADDQ8WWZ3 215 aa12.35□□□□□ -0.43
CCS-206ENST00000530961 CABLES2Q9BTV7 478 aa12.35□□□□□ -0.43
CCS-206ENST00000530961 ABHD14AQ9BUJ0 271 aa12.35□□□□□ -0.43
CCS-206ENST00000530961 SLIRPQ9GZT3 109 aaKnown RBP12.35□□□□□ -0.43
CCS-206ENST00000530961 GHITMQ9H3K2 345 aa12.35□□□□□ -0.43
CCS-206ENST00000530961 ABCB10Q9NRK6 738 aa12.35□□□□□ -0.43
CCS-206ENST00000530961 SLC23A1Q9UHI7 598 aa12.35□□□□□ -0.43
CCS-206ENST00000530961 MRPS7Q9Y2R9 242 aaKnown RBP12.35□□□□□ -0.43
CCS-206ENST00000530961 WNK2Q9Y3S1 2297 aa12.35□□□□□ -0.43
CCS-206ENST00000530961 A0A1W2PPE3 182 aa12.34□□□□□ -0.43
CCS-206ENST00000530961 CTDSP2O14595 271 aa12.34□□□□□ -0.43
CCS-206ENST00000530961 HLA-DQB1P01920 261 aa12.34□□□□□ -0.43
CCS-206ENST00000530961 BRS3P32247 399 aa12.34□□□□□ -0.43
CCS-206ENST00000530961 PRSS3P35030 304 aa12.34□□□□□ -0.43
CCS-206ENST00000530961 ZNF137PP52743 207 aa12.34□□□□□ -0.43
CCS-206ENST00000530961 PDLIM3Q53GG5 364 aaPredicted RBP12.34□□□□□ -0.43
CCS-206ENST00000530961 FAM53AQ6NSI3 398 aaPredicted RBP12.34□□□□□ -0.43
CCS-206ENST00000530961 DTX3Q8N9I9 347 aa12.34□□□□□ -0.43
CCS-206ENST00000530961 OR10J5Q8NHC4 309 aa12.34□□□□□ -0.43
CCS-206ENST00000530961 MAFIPQ8WZ33 124 aa12.34□□□□□ -0.43
CCS-206ENST00000530961 TOMM40LQ969M1 308 aa12.34□□□□□ -0.43
CCS-206ENST00000530961 DUX5Q96PT3 197 aa12.34□□□□□ -0.43
CCS-206ENST00000530961 NXF2Q9GZY0 626 aaKnown RBP12.34□□□□□ -0.43
CCS-206ENST00000530961 TOLLIPQ9H0E2 274 aa12.34□□□□□ -0.43
CCS-206ENST00000530961 VPREB3Q9UKI3 123 aa12.34□□□□□ -0.43
CCS-206ENST00000530961 MGAM2Q2M2H8 2515 aa12.34□□□□□ -0.43
CCS-206ENST00000530961 TRBV6-7A0A0A0MS04 114 aa12.33□□□□□ -0.44
CCS-206ENST00000530961 IGKV1-6A0A0C4DH72 117 aa12.33□□□□□ -0.44
CCS-206ENST00000530961 DPPA5A6NC42 116 aa12.33□□□□□ -0.44
CCS-206ENST00000530961 SLC31A2O15432 143 aa12.33□□□□□ -0.44
CCS-206ENST00000530961 GAPDHP04406 335 aaKnown RBP12.33□□□□□ -0.44
CCS-206ENST00000530961 LPLP06858 475 aa12.33□□□□□ -0.44
CCS-206ENST00000530961 RPL15P61313 204 aaKnown RBP12.33□□□□□ -0.44
CCS-206ENST00000530961 ZNF816Q0VGE8 651 aaPredicted RBP12.33□□□□□ -0.44
CCS-206ENST00000530961 HERPUD1Q15011 391 aa12.33□□□□□ -0.44
CCS-206ENST00000530961 IGSF11Q5DX21 431 aa12.33□□□□□ -0.44
CCS-206ENST00000530961 CNIH2Q6PI25 160 aa12.33□□□□□ -0.44
CCS-206ENST00000530961 HOGA1Q86XE5 327 aa12.33□□□□□ -0.44
CCS-206ENST00000530961 OR8H3Q8N146 312 aa12.33□□□□□ -0.44
CCS-206ENST00000530961 MCFD2Q8NI22 146 aa12.33□□□□□ -0.44
CCS-206ENST00000530961 ST6GALNAC6Q969X2 333 aa12.33□□□□□ -0.44
CCS-206ENST00000530961 CHIAQ9BZP6 476 aa12.33□□□□□ -0.44
CCS-206ENST00000530961 SCPEP1Q9HB40 452 aa12.33□□□□□ -0.44
CCS-206ENST00000530961 PIPOXQ9P0Z9 390 aa12.33□□□□□ -0.44
CCS-206ENST00000530961 OR1A1Q9P1Q5 309 aa12.33□□□□□ -0.44
CCS-206ENST00000530961 RABL2AQ9UBK7 228 aaPredicted RBP12.33□□□□□ -0.44
CCS-206ENST00000530961 EXTL2Q9UBQ6 330 aa12.33□□□□□ -0.44
CCS-206ENST00000530961 ANXA10Q9UJ72 324 aa12.33□□□□□ -0.44
CCS-206ENST00000530961 RABL2BQ9UNT1 228 aa12.33□□□□□ -0.44
CCS-206ENST00000530961 IGKV1D-8A0A087WSZ0 117 aa12.32□□□□□ -0.44
CCS-206ENST00000530961 H3BUX3 64 aa12.32□□□□□ -0.44
CCS-206ENST00000530961 SULT1C2O00338 296 aa12.32□□□□□ -0.44
CCS-206ENST00000530961 BET1O15155 118 aa12.32□□□□□ -0.44
CCS-206ENST00000530961 TXNL1O43396 289 aa12.32□□□□□ -0.44
CCS-206ENST00000530961 PTHLHP12272 177 aa12.32□□□□□ -0.44
CCS-206ENST00000530961 PAX6P26367 422 aa12.32□□□□□ -0.44
CCS-206ENST00000530961 SRSF2Q01130 221 aaKnown RBP12.32□□□□□ -0.44
CCS-206ENST00000530961 HIST2H2BDQ6DRA6 164 aa12.32□□□□□ -0.44
CCS-206ENST00000530961 LIAT1Q6ZQX7 453 aa12.32□□□□□ -0.44
CCS-206ENST00000530961 LYG1Q8N1E2 194 aa12.32□□□□□ -0.44
CCS-206ENST00000530961 BEST4Q8NFU0 473 aa12.32□□□□□ -0.44
CCS-206ENST00000530961 PIFOQ8TCI5 191 aa12.32□□□□□ -0.44
CCS-206ENST00000530961 GINS4Q9BRT9 223 aa12.32□□□□□ -0.44
CCS-206ENST00000530961 C6orf62Q9GZU0 229 aaPredicted RBP12.32□□□□□ -0.44
CCS-206ENST00000530961 C11orf54Q9H0W9 315 aaPredicted RBP12.32□□□□□ -0.44
CCS-206ENST00000530961 MIXL1Q9H2W2 232 aa12.32□□□□□ -0.44
CCS-206ENST00000530961 MMP27Q9H306 513 aa12.32□□□□□ -0.44
CCS-206ENST00000530961 TNFRSF19Q9NS68 423 aa12.32□□□□□ -0.44
CCS-206ENST00000530961 RDH8Q9NYR8 311 aa12.32□□□□□ -0.44
CCS-206ENST00000530961 PITPNC1Q9UKF7 332 aa12.32□□□□□ -0.44
CCS-206ENST00000530961 A3GALT2U3KPV4 340 aa12.32□□□□□ -0.44
CCS-206ENST00000530961 HSD17B6O14756 317 aa12.31□□□□□ -0.44
CCS-206ENST00000530961 RAB29O14966 203 aa12.31□□□□□ -0.44
CCS-206ENST00000530961 LANCL1O43813 399 aa12.31□□□□□ -0.44
CCS-206ENST00000530961 PLA1AQ53H76 456 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms