RNA–Protein interactions for RNA: ENST00000530548.5

PPFIA1-215, Transcript of PTPRF interacting protein alpha 1, human

TSL 2

Gene PPFIA1, Length 3,774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPFIA1-215	ENST00000530548	OR2A4	O95047	310 aa		6.59	□□□□□ -1.35
PPFIA1-215	ENST00000530548	CST4	P01036	141 aa		6.59	□□□□□ -1.35
PPFIA1-215	ENST00000530548	IGHV3-48	P01763	117 aa		6.59	□□□□□ -1.35
PPFIA1-215	ENST00000530548	CD3E	P07766	207 aa		6.59	□□□□□ -1.35
PPFIA1-215	ENST00000530548	CD40	P25942	277 aa		6.59	□□□□□ -1.35
PPFIA1-215	ENST00000530548	FGF8	P55075	233 aa	Predicted RBP	6.59	□□□□□ -1.35
PPFIA1-215	ENST00000530548	MSMO1	Q15800	293 aa		6.59	□□□□□ -1.35
PPFIA1-215	ENST00000530548	KRTCAP3	Q53RY4	240 aa		6.59	□□□□□ -1.35
PPFIA1-215	ENST00000530548	TGIF2LY	Q8IUE0	185 aa		6.59	□□□□□ -1.35
PPFIA1-215	ENST00000530548	OR2C3	Q8N628	320 aa		6.59	□□□□□ -1.35
PPFIA1-215	ENST00000530548	OR2A7	Q96R45	310 aa		6.59	□□□□□ -1.35
PPFIA1-215	ENST00000530548	SLC25A31	Q9H0C2	315 aa		6.59	□□□□□ -1.35
PPFIA1-215	ENST00000530548	PRELID3B	Q9Y3B1	194 aa		6.59	□□□□□ -1.35
PPFIA1-215	ENST00000530548		A0A0G2JNJ9	132 aa		6.59	□□□□□ -1.35
PPFIA1-215	ENST00000530548	C12orf77	C9JDV5	145 aa		6.59	□□□□□ -1.35
PPFIA1-215	ENST00000530548	RGS13	O14921	159 aa		6.59	□□□□□ -1.35
PPFIA1-215	ENST00000530548	COX5B	P10606	129 aa		6.59	□□□□□ -1.35
PPFIA1-215	ENST00000530548	SNCA	P37840	140 aa		6.59	□□□□□ -1.35
PPFIA1-215	ENST00000530548	TMPRSS3	P57727	454 aa		6.59	□□□□□ -1.35
PPFIA1-215	ENST00000530548		Q6ZS92	163 aa		6.59	□□□□□ -1.35
PPFIA1-215	ENST00000530548	WDR31	Q8NA23	367 aa		6.59	□□□□□ -1.35
PPFIA1-215	ENST00000530548	FAM57A	Q8TBR7	257 aa		6.59	□□□□□ -1.35
PPFIA1-215	ENST00000530548	MARC2	Q969Z3	335 aa		6.59	□□□□□ -1.35
PPFIA1-215	ENST00000530548	S1PR3	Q99500	378 aa		6.59	□□□□□ -1.35
PPFIA1-215	ENST00000530548	FAM212B	Q9NTI7	297 aa	Predicted RBP	6.59	□□□□□ -1.35
PPFIA1-215	ENST00000530548	CISD1	Q9NZ45	108 aa	Known RBP	6.59	□□□□□ -1.35
PPFIA1-215	ENST00000530548	RNF7	Q9UBF6	113 aa		6.59	□□□□□ -1.35
PPFIA1-215	ENST00000530548		Q9UFV3	132 aa		6.59	□□□□□ -1.35
PPFIA1-215	ENST00000530548	LAMP3	Q9UQV4	416 aa		6.59	□□□□□ -1.35
PPFIA1-215	ENST00000530548	URGCP-MRPS24	S4R325	110 aa		6.59	□□□□□ -1.35
PPFIA1-215	ENST00000530548	CRYM-AS1	A6NIL9	109 aa		6.59	□□□□□ -1.36
PPFIA1-215	ENST00000530548	PGLYRP1	O75594	196 aa	Predicted RBP	6.59	□□□□□ -1.36
PPFIA1-215	ENST00000530548	NMB	P08949	121 aa		6.59	□□□□□ -1.36
PPFIA1-215	ENST00000530548	ZNF14	P17017	642 aa	Predicted RBP	6.59	□□□□□ -1.36
PPFIA1-215	ENST00000530548	TNFRSF1A	P19438	455 aa		6.59	□□□□□ -1.36
PPFIA1-215	ENST00000530548	DYNLT3	P51808	116 aa		6.59	□□□□□ -1.36
PPFIA1-215	ENST00000530548	RPL39P5	Q59GN2	51 aa		6.59	□□□□□ -1.36
PPFIA1-215	ENST00000530548	FGFRL1	Q8N441	504 aa		6.59	□□□□□ -1.36
PPFIA1-215	ENST00000530548	MOB3A	Q96BX8	217 aa		6.59	□□□□□ -1.36
PPFIA1-215	ENST00000530548	BSCL2	Q96G97	398 aa	Predicted RBP	6.59	□□□□□ -1.36
PPFIA1-215	ENST00000530548	KCNJ16	Q9NPI9	418 aa		6.59	□□□□□ -1.36
PPFIA1-215	ENST00000530548	LIN7C	Q9NUP9	197 aa	Known RBP	6.59	□□□□□ -1.36
PPFIA1-215	ENST00000530548	HSF4	Q9ULV5	492 aa		6.59	□□□□□ -1.36
PPFIA1-215	ENST00000530548	COL4A2	P08572	1712 aa		6.59	□□□□□ -1.36
PPFIA1-215	ENST00000530548	ARHGAP21	Q5T5U3	1957 aa		6.58	□□□□□ -1.36
PPFIA1-215	ENST00000530548	KIAA1549	Q9HCM3	1950 aa		6.58	□□□□□ -1.36
PPFIA1-215	ENST00000530548	ZNF462	Q96JM2	2506 aa		6.58	□□□□□ -1.36
PPFIA1-215	ENST00000530548	ARHGAP32	A7KAX9	2087 aa		6.58	□□□□□ -1.36
PPFIA1-215	ENST00000530548	HMSD	A8MTL9	139 aa		6.58	□□□□□ -1.36
PPFIA1-215	ENST00000530548	C1QTNF9B	B2RNN3	333 aa		6.58	□□□□□ -1.36
PPFIA1-215	ENST00000530548	FAM157A	C9JC47	383 aa		6.58	□□□□□ -1.36
PPFIA1-215	ENST00000530548	SHOX	O15266	292 aa		6.58	□□□□□ -1.36
PPFIA1-215	ENST00000530548	C1QTNF9	P0C862	333 aa		6.58	□□□□□ -1.36
PPFIA1-215	ENST00000530548	F2R	P25116	425 aa		6.58	□□□□□ -1.36
PPFIA1-215	ENST00000530548	SRPX	P78539	464 aa		6.58	□□□□□ -1.36
PPFIA1-215	ENST00000530548	NHLH1	Q02575	133 aa		6.58	□□□□□ -1.36
PPFIA1-215	ENST00000530548	DUX4L9	Q6RFH8	374 aa	Predicted RBP	6.58	□□□□□ -1.36
PPFIA1-215	ENST00000530548	ZNRD1	Q9P1U0	126 aa		6.58	□□□□□ -1.36
PPFIA1-215	ENST00000530548	GNG13	Q9P2W3	67 aa		6.58	□□□□□ -1.36
PPFIA1-215	ENST00000530548	MLX	Q9UH92	298 aa		6.58	□□□□□ -1.36
PPFIA1-215	ENST00000530548	FAM215A	Q9Y5M1	114 aa		6.58	□□□□□ -1.36
PPFIA1-215	ENST00000530548	IGHV3-21	A0A0B4J1V1	117 aa		6.58	□□□□□ -1.36
PPFIA1-215	ENST00000530548	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	6.58	□□□□□ -1.36
PPFIA1-215	ENST00000530548	GPR137B	O60478	399 aa		6.58	□□□□□ -1.36
PPFIA1-215	ENST00000530548	TNFSF13	O75888	250 aa		6.58	□□□□□ -1.36
PPFIA1-215	ENST00000530548	EGR1	P18146	543 aa		6.58	□□□□□ -1.36
PPFIA1-215	ENST00000530548	RPL31	P62899	125 aa	Known RBP	6.58	□□□□□ -1.36
PPFIA1-215	ENST00000530548	MIDN	Q504T8	468 aa		6.58	□□□□□ -1.36
PPFIA1-215	ENST00000530548	CLLU1	Q5K131	121 aa		6.58	□□□□□ -1.36
PPFIA1-215	ENST00000530548	TIMM23B	Q5SRD1	257 aa		6.58	□□□□□ -1.36
PPFIA1-215	ENST00000530548	WDR82	Q6UXN9	313 aa		6.58	□□□□□ -1.36
PPFIA1-215	ENST00000530548	FOXL2NB	Q6ZUU3	175 aa		6.58	□□□□□ -1.36
PPFIA1-215	ENST00000530548	WDR86	Q86TI4	376 aa		6.58	□□□□□ -1.36
PPFIA1-215	ENST00000530548	MRPL30	Q8TCC3	161 aa	Known RBP	6.58	□□□□□ -1.36
PPFIA1-215	ENST00000530548	ZCCHC14	Q8WYQ9	949 aa	Known RBP	6.58	□□□□□ -1.36
PPFIA1-215	ENST00000530548	SH3BGRL3	Q9H299	93 aa		6.58	□□□□□ -1.36
PPFIA1-215	ENST00000530548	GCM1	Q9NP62	436 aa		6.58	□□□□□ -1.36
PPFIA1-215	ENST00000530548	ONECUT1	Q9UBC0	465 aa		6.58	□□□□□ -1.36
PPFIA1-215	ENST00000530548	TMED3	Q9Y3Q3	217 aa		6.58	□□□□□ -1.36
PPFIA1-215	ENST00000530548	NCKAP5	O14513	1909 aa		6.58	□□□□□ -1.36
PPFIA1-215	ENST00000530548	NAV3	Q8IVL0	2385 aa		6.58	□□□□□ -1.36
PPFIA1-215	ENST00000530548	PAX6	P26367	422 aa		6.58	□□□□□ -1.36
PPFIA1-215	ENST00000530548	IL24	Q13007	206 aa		6.58	□□□□□ -1.36
PPFIA1-215	ENST00000530548	CST9LP1	Q5W188	147 aa		6.58	□□□□□ -1.36
PPFIA1-215	ENST00000530548	FAM122C	Q6P4D5	195 aa		6.58	□□□□□ -1.36
PPFIA1-215	ENST00000530548	DRAM1	Q8N682	238 aa		6.58	□□□□□ -1.36
PPFIA1-215	ENST00000530548	LHFPL5	Q8TAF8	219 aa		6.58	□□□□□ -1.36
PPFIA1-215	ENST00000530548	UBTD1	Q9HAC8	227 aa		6.58	□□□□□ -1.36
PPFIA1-215	ENST00000530548	WNK1	Q9H4A3	2382 aa		6.57	□□□□□ -1.36
PPFIA1-215	ENST00000530548	ODAM	A1E959	279 aa		6.57	□□□□□ -1.36
PPFIA1-215	ENST00000530548	RNF222	A6NCQ9	220 aa		6.57	□□□□□ -1.36
PPFIA1-215	ENST00000530548	RNF212B	A8MTL3	300 aa		6.57	□□□□□ -1.36
PPFIA1-215	ENST00000530548	NDUFB3	O43676	98 aa		6.57	□□□□□ -1.36
PPFIA1-215	ENST00000530548	JTB	O76095	146 aa		6.57	□□□□□ -1.36
PPFIA1-215	ENST00000530548	IGHG3	P01860	377 aa		6.57	□□□□□ -1.36
PPFIA1-215	ENST00000530548	DAO	P14920	347 aa		6.57	□□□□□ -1.36
PPFIA1-215	ENST00000530548	CCL3L1	P16619	93 aa		6.57	□□□□□ -1.36
PPFIA1-215	ENST00000530548	VDAC1	P21796	283 aa		6.57	□□□□□ -1.36
PPFIA1-215	ENST00000530548	KIAA0141	Q14154	515 aa	Predicted RBP	6.57	□□□□□ -1.36
PPFIA1-215	ENST00000530548	HFE	Q30201	348 aa		6.57	□□□□□ -1.36

Retrieved 100 of 20,778 RNA–protein pairs in 68 ms