RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 OR11L1Q8NGX0 322 aa9.91□□□□□ -0.82
USF1-208ENST00000528768 PPP1R35Q8TAP8 253 aa9.91□□□□□ -0.82
USF1-208ENST00000528768 HS3ST6Q96QI5 342 aa9.91□□□□□ -0.82
USF1-208ENST00000528768 C1QTNF6Q9BXI9 259 aa9.91□□□□□ -0.82
USF1-208ENST00000528768 OPN3Q9H1Y3 402 aaPredicted RBP9.91□□□□□ -0.82
USF1-208ENST00000528768 OR2S2Q9NQN1 319 aa9.91□□□□□ -0.82
USF1-208ENST00000528768 IL36RNQ9UBH0 155 aa9.91□□□□□ -0.82
USF1-208ENST00000528768 WIPI2Q9Y4P8 454 aa9.91□□□□□ -0.82
USF1-208ENST00000528768 FREM1Q5H8C1 2179 aa9.91□□□□□ -0.82
USF1-208ENST00000528768 IGHV2OR16-5A0A0B4J2B6 119 aa9.9□□□□□ -0.82
USF1-208ENST00000528768 IFNL4K9M1U5 179 aa9.9□□□□□ -0.82
USF1-208ENST00000528768 WRBO00258 174 aa9.9□□□□□ -0.82
USF1-208ENST00000528768 SLC33A1O00400 549 aaPredicted RBP9.9□□□□□ -0.82
USF1-208ENST00000528768 ATG12O94817 140 aa9.9□□□□□ -0.82
USF1-208ENST00000528768 MBPP02686 304 aaPredicted RBP9.9□□□□□ -0.82
USF1-208ENST00000528768 SERPINE2P07093 398 aa9.9□□□□□ -0.82
USF1-208ENST00000528768 SLC25A6P12236 298 aa9.9□□□□□ -0.82
USF1-208ENST00000528768 ZNF250P15622 560 aa9.9□□□□□ -0.82
USF1-208ENST00000528768 MPV17P39210 176 aa9.9□□□□□ -0.82
USF1-208ENST00000528768 CD200P41217 278 aa9.9□□□□□ -0.82
USF1-208ENST00000528768 NKX2-1P43699 371 aaPredicted RBP9.9□□□□□ -0.82
USF1-208ENST00000528768 FOXF2Q12947 444 aa9.9□□□□□ -0.82
USF1-208ENST00000528768 SWI5Q1ZZU3 235 aa9.9□□□□□ -0.82
USF1-208ENST00000528768 SMIM21Q3B7S5 101 aa9.9□□□□□ -0.82
USF1-208ENST00000528768 SLC35E4Q6ICL7 350 aa9.9□□□□□ -0.82
USF1-208ENST00000528768 SSX8Q7RTT4 187 aa9.9□□□□□ -0.82
USF1-208ENST00000528768 SELENOHQ8IZQ5 122 aaKnown RBP9.9□□□□□ -0.82
USF1-208ENST00000528768 SLC35G3Q8N808 338 aa9.9□□□□□ -0.82
USF1-208ENST00000528768 ZBTB34Q8NCN2 500 aa9.9□□□□□ -0.82
USF1-208ENST00000528768 RNASE11Q8TAA1 199 aaKnown RBP9.9□□□□□ -0.82
USF1-208ENST00000528768 TP53RKQ96S44 253 aa9.9□□□□□ -0.82
USF1-208ENST00000528768 PLEKHF2Q9H8W4 249 aa9.9□□□□□ -0.82
USF1-208ENST00000528768 HES4Q9HCC6 221 aa9.9□□□□□ -0.82
USF1-208ENST00000528768 CCL28Q9NRJ3 127 aa9.9□□□□□ -0.82
USF1-208ENST00000528768 IGHV1-18A0A0C4DH31 117 aa9.89□□□□□ -0.83
USF1-208ENST00000528768 OOEPA6NGQ2 149 aa9.89□□□□□ -0.83
USF1-208ENST00000528768 MSGN1A6NI15 193 aa9.89□□□□□ -0.83
USF1-208ENST00000528768 ZNF705EA8MWA4 302 aaPredicted RBP9.89□□□□□ -0.83
USF1-208ENST00000528768 PGLYRP1O75594 196 aaPredicted RBP9.89□□□□□ -0.83
USF1-208ENST00000528768 ZNF205O95201 554 aa9.89□□□□□ -0.83
USF1-208ENST00000528768 CRYAAP02489 173 aa9.89□□□□□ -0.83
USF1-208ENST00000528768 F2RP25116 425 aa9.89□□□□□ -0.83
USF1-208ENST00000528768 LMO1P25800 156 aa9.89□□□□□ -0.83
USF1-208ENST00000528768 FABP6P51161 128 aa9.89□□□□□ -0.83
USF1-208ENST00000528768 TMEM33P57088 247 aa9.89□□□□□ -0.83
USF1-208ENST00000528768 ERVS71-1P61550 626 aa9.89□□□□□ -0.83
USF1-208ENST00000528768 HERPUD1Q15011 391 aa9.89□□□□□ -0.83
USF1-208ENST00000528768 Q6ZPA2 131 aa9.89□□□□□ -0.83
USF1-208ENST00000528768 ZNF818PQ6ZRF7 136 aa9.89□□□□□ -0.83
USF1-208ENST00000528768 WDR86Q86TI4 376 aa9.89□□□□□ -0.83
USF1-208ENST00000528768 MYPOPQ86VE0 399 aaPredicted RBP9.89□□□□□ -0.83
USF1-208ENST00000528768 FAM90A1Q86YD7 464 aa9.89□□□□□ -0.83
USF1-208ENST00000528768 LRRC75A-AS1Q8N1F1 130 aa9.89□□□□□ -0.83
USF1-208ENST00000528768 UBAC2Q8NBM4 344 aa9.89□□□□□ -0.83
USF1-208ENST00000528768 OR4D5Q8NGN0 318 aa9.89□□□□□ -0.83
USF1-208ENST00000528768 OR10Z1Q8NGY1 313 aa9.89□□□□□ -0.83
USF1-208ENST00000528768 TMED6Q8WW62 240 aa9.89□□□□□ -0.83
USF1-208ENST00000528768 IL1F10Q8WWZ1 152 aa9.89□□□□□ -0.83
USF1-208ENST00000528768 TLNRD1Q9H1K6 362 aa9.89□□□□□ -0.83
USF1-208ENST00000528768 MMP26Q9NRE1 261 aa9.89□□□□□ -0.83
USF1-208ENST00000528768 FAM212BQ9NTI7 297 aaPredicted RBP9.89□□□□□ -0.83
USF1-208ENST00000528768 LIN7CQ9NUP9 197 aaKnown RBP9.89□□□□□ -0.83
USF1-208ENST00000528768 FBXL17Q9UF56 701 aa9.89□□□□□ -0.83
USF1-208ENST00000528768 RCL1Q9Y2P8 373 aaKnown RBP9.89□□□□□ -0.83
USF1-208ENST00000528768 SLC25A15Q9Y619 301 aa9.89□□□□□ -0.83
USF1-208ENST00000528768 IGKV1-6A0A0C4DH72 117 aa9.88□□□□□ -0.83
USF1-208ENST00000528768 A0A1B0GU03 582 aa9.88□□□□□ -0.83
USF1-208ENST00000528768 RCC1P18754 421 aaPredicted RBP9.88□□□□□ -0.83
USF1-208ENST00000528768 IL2RGP31785 369 aa9.88□□□□□ -0.83
USF1-208ENST00000528768 RAB5CP51148 216 aa9.88□□□□□ -0.83
USF1-208ENST00000528768 ZNF266Q14584 549 aa9.88□□□□□ -0.83
USF1-208ENST00000528768 HMGN3Q15651 99 aa9.88□□□□□ -0.83
USF1-208ENST00000528768 MSMO1Q15800 293 aa9.88□□□□□ -0.83
USF1-208ENST00000528768 RPL7L1Q6DKI1 246 aaKnown RBP9.88□□□□□ -0.83
USF1-208ENST00000528768 PRSS57Q6UWY2 283 aa9.88□□□□□ -0.83
USF1-208ENST00000528768 RPRMLQ8N4K4 120 aa9.88□□□□□ -0.83
USF1-208ENST00000528768 GALMQ96C23 342 aa9.88□□□□□ -0.83
USF1-208ENST00000528768 SEBOXQ9HB31 216 aaPredicted RBP9.88□□□□□ -0.83
USF1-208ENST00000528768 RAB9BQ9NP90 201 aa9.88□□□□□ -0.83
USF1-208ENST00000528768 MBNL3Q9NUK0 354 aaKnown RBP9.88□□□□□ -0.83
USF1-208ENST00000528768 LPAR3Q9UBY5 353 aa9.88□□□□□ -0.83
USF1-208ENST00000528768 OR14J1Q9UGF5 321 aa9.88□□□□□ -0.83
USF1-208ENST00000528768 A0A0G2JNJ9 132 aa9.87□□□□□ -0.83
USF1-208ENST00000528768 H0YL77 283 aa9.87□□□□□ -0.83
USF1-208ENST00000528768 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.87□□□□□ -0.83
USF1-208ENST00000528768 M0R1B8 84 aa9.87□□□□□ -0.83
USF1-208ENST00000528768 KCNAB3O43448 404 aa9.87□□□□□ -0.83
USF1-208ENST00000528768 SEC11BP0C7V7 166 aa9.87□□□□□ -0.83
USF1-208ENST00000528768 GLI4P10075 376 aa9.87□□□□□ -0.83
USF1-208ENST00000528768 GLRXP35754 106 aa9.87□□□□□ -0.83
USF1-208ENST00000528768 SULT1A2P50226 295 aa9.87□□□□□ -0.83
USF1-208ENST00000528768 ALKBH6Q3KRA9 238 aa9.87□□□□□ -0.83
USF1-208ENST00000528768 FBXL19-AS1Q494R0 122 aa9.87□□□□□ -0.83
USF1-208ENST00000528768 ACP7Q6ZNF0 438 aa9.87□□□□□ -0.83
USF1-208ENST00000528768 MED12LQ86YW9 2145 aa9.87□□□□□ -0.83
USF1-208ENST00000528768 KRTAP1-3Q8IUG1 177 aa9.87□□□□□ -0.83
USF1-208ENST00000528768 OR2C3Q8N628 320 aa9.87□□□□□ -0.83
USF1-208ENST00000528768 COMMD1Q8N668 190 aa9.87□□□□□ -0.83
USF1-208ENST00000528768 PLPPR1Q8TBJ4 325 aa9.87□□□□□ -0.83
USF1-208ENST00000528768 FAM216AQ8WUB2 273 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms