RNA–Protein interactions for RNA: ENST00000528739.5

CAPN1-216, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-216ENST00000528739 UBE2UQ5VVX9 321 aa11.36□□□□□ -0.59
CAPN1-216ENST00000528739 STEAP3Q658P3 488 aa11.36□□□□□ -0.59
CAPN1-216ENST00000528739 MOB1BQ7L9L4 216 aa11.36□□□□□ -0.59
CAPN1-216ENST00000528739 SLC35E3Q7Z769 313 aa11.36□□□□□ -0.59
CAPN1-216ENST00000528739 C5orf56Q8N8D9 126 aa11.36□□□□□ -0.59
CAPN1-216ENST00000528739 ZNF439Q8NDP4 499 aa11.36□□□□□ -0.59
CAPN1-216ENST00000528739 YPEL2Q96QA6 119 aa11.36□□□□□ -0.59
CAPN1-216ENST00000528739 PECRQ9BY49 303 aa11.36□□□□□ -0.59
CAPN1-216ENST00000528739 SLC23A1Q9UHI7 598 aa11.36□□□□□ -0.59
CAPN1-216ENST00000528739 LINC00527Q9UJ94 153 aa11.36□□□□□ -0.59
CAPN1-216ENST00000528739 SSR3Q9UNL2 185 aa11.36□□□□□ -0.59
CAPN1-216ENST00000528739 TRRAPQ9Y4A5 3859 aa11.35□□□□□ -0.59
CAPN1-216ENST00000528739 CD3GP09693 182 aa11.35□□□□□ -0.59
CAPN1-216ENST00000528739 GADD45AP24522 165 aa11.35□□□□□ -0.59
CAPN1-216ENST00000528739 ZNF329Q86UD4 541 aa11.35□□□□□ -0.59
CAPN1-216ENST00000528739 FOXRED2Q8IWF2 684 aa11.35□□□□□ -0.59
CAPN1-216ENST00000528739 FAM89BQ8N5H3 189 aa11.35□□□□□ -0.59
CAPN1-216ENST00000528739 ST6GALNAC6Q969X2 333 aa11.35□□□□□ -0.59
CAPN1-216ENST00000528739 RBMXL1Q96E39 390 aaKnown RBP11.35□□□□□ -0.59
CAPN1-216ENST00000528739 NOL4LQ96MY1 436 aaPredicted RBP11.35□□□□□ -0.59
CAPN1-216ENST00000528739 MGAT4AQ9UM21 535 aa11.35□□□□□ -0.59
CAPN1-216ENST00000528739 TSSC4Q9Y5U2 329 aaPredicted RBP11.35□□□□□ -0.59
CAPN1-216ENST00000528739 METTL21EPA6NDL7 271 aa11.34□□□□□ -0.59
CAPN1-216ENST00000528739 IFITM5A6NNB3 132 aa11.34□□□□□ -0.59
CAPN1-216ENST00000528739 ST8SIA5O15466 376 aa11.34□□□□□ -0.59
CAPN1-216ENST00000528739 KCNAB3O43448 404 aa11.34□□□□□ -0.59
CAPN1-216ENST00000528739 LANCL1O43813 399 aa11.34□□□□□ -0.59
CAPN1-216ENST00000528739 NAPSAO96009 420 aa11.34□□□□□ -0.59
CAPN1-216ENST00000528739 PF4P02776 101 aa11.34□□□□□ -0.59
CAPN1-216ENST00000528739 CEACAM6P40199 344 aa11.34□□□□□ -0.59
CAPN1-216ENST00000528739 TMEM50BP56557 158 aa11.34□□□□□ -0.59
CAPN1-216ENST00000528739 SLC35B1P78383 322 aa11.34□□□□□ -0.59
CAPN1-216ENST00000528739 PLA2G7Q13093 441 aa11.34□□□□□ -0.59
CAPN1-216ENST00000528739 NEDD8Q15843 81 aa11.34□□□□□ -0.59
CAPN1-216ENST00000528739 ZNF773Q6PK81 442 aa11.34□□□□□ -0.59
CAPN1-216ENST00000528739 C10orf99Q6UWK7 81 aa11.34□□□□□ -0.59
CAPN1-216ENST00000528739 IZUMO1Q8IYV9 350 aa11.34□□□□□ -0.59
CAPN1-216ENST00000528739 CHPT1Q8WUD6 406 aa11.34□□□□□ -0.59
CAPN1-216ENST00000528739 RAB3CQ96E17 227 aa11.34□□□□□ -0.59
CAPN1-216ENST00000528739 C12orf4Q9NQ89 552 aa11.34□□□□□ -0.59
CAPN1-216ENST00000528739 HSF4Q9ULV5 492 aa11.34□□□□□ -0.59
CAPN1-216ENST00000528739 STUB1Q9UNE7 303 aa11.34□□□□□ -0.59
CAPN1-216ENST00000528739 A0A0B4J203 849 aa11.33□□□□□ -0.6
CAPN1-216ENST00000528739 SHISA3A0PJX4 238 aa11.33□□□□□ -0.6
CAPN1-216ENST00000528739 WIPF1O43516 503 aa11.33□□□□□ -0.6
CAPN1-216ENST00000528739 SCTP09683 121 aa11.33□□□□□ -0.6
CAPN1-216ENST00000528739 GALP22466 123 aa11.33□□□□□ -0.6
CAPN1-216ENST00000528739 ZBTB25P24278 435 aa11.33□□□□□ -0.6
CAPN1-216ENST00000528739 TALDO1P37837 337 aa11.33□□□□□ -0.6
CAPN1-216ENST00000528739 OR3A3P47888 321 aa11.33□□□□□ -0.6
CAPN1-216ENST00000528739 ZNF137PP52743 207 aa11.33□□□□□ -0.6
CAPN1-216ENST00000528739 HLA-DRB3P79483 266 aa11.33□□□□□ -0.6
CAPN1-216ENST00000528739 CD83Q01151 205 aa11.33□□□□□ -0.6
CAPN1-216ENST00000528739 EBI3Q14213 229 aa11.33□□□□□ -0.6
CAPN1-216ENST00000528739 MMDQ15546 238 aa11.33□□□□□ -0.6
CAPN1-216ENST00000528739 ZNF880Q6PDB4 577 aa11.33□□□□□ -0.6
CAPN1-216ENST00000528739 CD200R1LQ6Q8B3 271 aa11.33□□□□□ -0.6
CAPN1-216ENST00000528739 S1PR3Q99500 378 aa11.33□□□□□ -0.6
CAPN1-216ENST00000528739 ZNF251Q9BRH9 671 aa11.33□□□□□ -0.6
CAPN1-216ENST00000528739 MRPL20Q9BYC9 149 aaKnown RBP11.33□□□□□ -0.6
CAPN1-216ENST00000528739 ATG5Q9H1Y0 275 aa11.33□□□□□ -0.6
CAPN1-216ENST00000528739 Q9N2K0 584 aa11.33□□□□□ -0.6
CAPN1-216ENST00000528739 TXNL4BQ9NX01 149 aaKnown RBP11.33□□□□□ -0.6
CAPN1-216ENST00000528739 PIPOXQ9P0Z9 390 aa11.33□□□□□ -0.6
CAPN1-216ENST00000528739 SAA2-SAA4A0A096LPE2 208 aa11.32□□□□□ -0.6
CAPN1-216ENST00000528739 LOC100506127A0A0U1RQW1 187 aa11.32□□□□□ -0.6
CAPN1-216ENST00000528739 RAB29O14966 203 aa11.32□□□□□ -0.6
CAPN1-216ENST00000528739 SAA2P0DJI9 122 aaPredicted RBP11.32□□□□□ -0.6
CAPN1-216ENST00000528739 SLC2A2P11168 524 aaPredicted RBP11.32□□□□□ -0.6
CAPN1-216ENST00000528739 GNB3P16520 340 aa11.32□□□□□ -0.6
CAPN1-216ENST00000528739 CD33P20138 364 aa11.32□□□□□ -0.6
CAPN1-216ENST00000528739 F2RL1P55085 397 aa11.32□□□□□ -0.6
CAPN1-216ENST00000528739 LSAMPQ13449 338 aa11.32□□□□□ -0.6
CAPN1-216ENST00000528739 ARFRP1Q13795 201 aa11.32□□□□□ -0.6
CAPN1-216ENST00000528739 PLAC9Q5JTB6 97 aa11.32□□□□□ -0.6
CAPN1-216ENST00000528739 Q8N9W7 124 aa11.32□□□□□ -0.6
CAPN1-216ENST00000528739 OR8H1Q8NGG4 311 aa11.32□□□□□ -0.6
CAPN1-216ENST00000528739 OR10R2Q8NGX6 335 aa11.32□□□□□ -0.6
CAPN1-216ENST00000528739 WIPF2Q8TF74 440 aaPredicted RBP11.32□□□□□ -0.6
CAPN1-216ENST00000528739 ABHD14BQ96IU4 210 aa11.32□□□□□ -0.6
CAPN1-216ENST00000528739 CHCHD6Q9BRQ6 235 aa11.32□□□□□ -0.6
CAPN1-216ENST00000528739 OR51E2Q9H255 320 aa11.32□□□□□ -0.6
CAPN1-216ENST00000528739 LIN7CQ9NUP9 197 aaKnown RBP11.32□□□□□ -0.6
CAPN1-216ENST00000528739 OR1A1Q9P1Q5 309 aa11.32□□□□□ -0.6
CAPN1-216ENST00000528739 DAPK2Q9UIK4 370 aa11.32□□□□□ -0.6
CAPN1-216ENST00000528739 RNF150Q9ULK6 438 aa11.32□□□□□ -0.6
CAPN1-216ENST00000528739 NBEAL1Q6ZS30 2694 aa11.31□□□□□ -0.6
CAPN1-216ENST00000528739 TRBV6-6A0A0A6YYG2 114 aa11.31□□□□□ -0.6
CAPN1-216ENST00000528739 NUDT19A8MXV4 375 aa11.31□□□□□ -0.6
CAPN1-216ENST00000528739 TRDCB7Z8K6 153 aa11.31□□□□□ -0.6
CAPN1-216ENST00000528739 G3V4G9 280 aa11.31□□□□□ -0.6
CAPN1-216ENST00000528739 LDLRAD4O15165 306 aa11.31□□□□□ -0.6
CAPN1-216ENST00000528739 RRP9O43818 475 aaKnown RBP11.31□□□□□ -0.6
CAPN1-216ENST00000528739 IGHG2P01859 326 aa11.31□□□□□ -0.6
CAPN1-216ENST00000528739 RAB6AP20340 208 aa11.31□□□□□ -0.6
CAPN1-216ENST00000528739 SOX6P35712 828 aa11.31□□□□□ -0.6
CAPN1-216ENST00000528739 MXD1Q05195 221 aa11.31□□□□□ -0.6
CAPN1-216ENST00000528739 MOGAT2Q3SYC2 334 aa11.31□□□□□ -0.6
CAPN1-216ENST00000528739 RPL39P5Q59GN2 51 aa11.31□□□□□ -0.6
CAPN1-216ENST00000528739 ODF3L1Q8IXM7 274 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms