RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 LYRM2Q9NU23 88 aaPredicted RBP12.35□□□□□ -0.43
ECHDC1-220ENST00000528402 COA4Q9NYJ1 87 aa12.35□□□□□ -0.43
ECHDC1-220ENST00000528402 TAS2R3Q9NYW6 316 aa12.35□□□□□ -0.43
ECHDC1-220ENST00000528402 RAXQ9Y2V3 346 aa12.35□□□□□ -0.43
ECHDC1-220ENST00000528402 DMXL1Q9Y485 3027 aa12.34□□□□□ -0.43
ECHDC1-220ENST00000528402 C15orf65H3BRN8 121 aa12.34□□□□□ -0.43
ECHDC1-220ENST00000528402 YPEL1O60688 119 aa12.34□□□□□ -0.43
ECHDC1-220ENST00000528402 THBDP07204 575 aa12.34□□□□□ -0.43
ECHDC1-220ENST00000528402 SULT1A2P50226 295 aa12.34□□□□□ -0.43
ECHDC1-220ENST00000528402 RAB5CP51148 216 aa12.34□□□□□ -0.43
ECHDC1-220ENST00000528402 RPL23AP62750 156 aaKnown RBP12.34□□□□□ -0.43
ECHDC1-220ENST00000528402 ZNF266Q14584 549 aa12.34□□□□□ -0.43
ECHDC1-220ENST00000528402 FAM209AQ5JX71 171 aa12.34□□□□□ -0.43
ECHDC1-220ENST00000528402 C22orf34Q6ZV56 151 aa12.34□□□□□ -0.43
ECHDC1-220ENST00000528402 OR52L2PQ8NGH6 319 aa12.34□□□□□ -0.43
ECHDC1-220ENST00000528402 OR13A1Q8NGR1 328 aa12.34□□□□□ -0.43
ECHDC1-220ENST00000528402 TMED6Q8WW62 240 aa12.34□□□□□ -0.43
ECHDC1-220ENST00000528402 C14orf79Q96F83 325 aa12.34□□□□□ -0.43
ECHDC1-220ENST00000528402 YPEL2Q96QA6 119 aa12.34□□□□□ -0.43
ECHDC1-220ENST00000528402 HSD17B10Q99714 261 aaKnown RBP12.34□□□□□ -0.43
ECHDC1-220ENST00000528402 GINS3Q9BRX5 216 aa12.34□□□□□ -0.43
ECHDC1-220ENST00000528402 METRNQ9UJH8 293 aa12.34□□□□□ -0.43
ECHDC1-220ENST00000528402 NUP50Q9UKX7 468 aa12.34□□□□□ -0.43
ECHDC1-220ENST00000528402 GAB2Q9UQC2 676 aa12.34□□□□□ -0.43
ECHDC1-220ENST00000528402 C17orf100A8MU93 164 aa12.33□□□□□ -0.44
ECHDC1-220ENST00000528402 F2RL2O00254 374 aa12.33□□□□□ -0.44
ECHDC1-220ENST00000528402 CA7P43166 264 aa12.33□□□□□ -0.44
ECHDC1-220ENST00000528402 TAS2R30P59541 319 aa12.33□□□□□ -0.44
ECHDC1-220ENST00000528402 BSPH1Q075Z2 132 aa12.33□□□□□ -0.44
ECHDC1-220ENST00000528402 EIF4EBP1Q13541 118 aaPredicted RBP12.33□□□□□ -0.44
ECHDC1-220ENST00000528402 FBXL19-AS1Q494R0 122 aa12.33□□□□□ -0.44
ECHDC1-220ENST00000528402 TEX36Q5VZQ5 186 aa12.33□□□□□ -0.44
ECHDC1-220ENST00000528402 IL34Q6ZMJ4 242 aa12.33□□□□□ -0.44
ECHDC1-220ENST00000528402 C1orf87Q8N0U7 546 aa12.33□□□□□ -0.44
ECHDC1-220ENST00000528402 BOLLQ8N9W6 283 aaKnown RBP12.33□□□□□ -0.44
ECHDC1-220ENST00000528402 SMIM8Q96KF7 97 aa12.33□□□□□ -0.44
ECHDC1-220ENST00000528402 OR2D2Q9H210 308 aa12.33□□□□□ -0.44
ECHDC1-220ENST00000528402 ZNF665Q9H7R5 613 aa12.33□□□□□ -0.44
ECHDC1-220ENST00000528402 LPAR3Q9UBY5 353 aa12.33□□□□□ -0.44
ECHDC1-220ENST00000528402 SH3BGRL2Q9UJC5 107 aa12.33□□□□□ -0.44
ECHDC1-220ENST00000528402 MMP24Q9Y5R2 645 aa12.33□□□□□ -0.44
ECHDC1-220ENST00000528402 TRGV8A0A0C4DH27 118 aa12.32□□□□□ -0.44
ECHDC1-220ENST00000528402 OR4A8P0C604 315 aa12.32□□□□□ -0.44
ECHDC1-220ENST00000528402 ARHGDIBP52566 201 aa12.32□□□□□ -0.44
ECHDC1-220ENST00000528402 POLR2GP62487 172 aaKnown RBP eCLIP12.32□□□□□ -0.44
ECHDC1-220ENST00000528402 EWSR1Q01844 656 aaKnown RBP eCLIP12.32□□□□□ -0.44
ECHDC1-220ENST00000528402 ADIPOQQ15848 244 aa12.32□□□□□ -0.44
ECHDC1-220ENST00000528402 ZNF585BQ52M93 769 aa12.32□□□□□ -0.44
ECHDC1-220ENST00000528402 PRR30Q53SZ7 412 aaPredicted RBP12.32□□□□□ -0.44
ECHDC1-220ENST00000528402 STUMQ69YW2 141 aa12.32□□□□□ -0.44
ECHDC1-220ENST00000528402 TMEM252Q8N6L7 170 aa12.32□□□□□ -0.44
ECHDC1-220ENST00000528402 MMP26Q9NRE1 261 aa12.32□□□□□ -0.44
ECHDC1-220ENST00000528402 WSB1Q9Y6I7 421 aa12.32□□□□□ -0.44
ECHDC1-220ENST00000528402 CADP27708 2225 aa12.32□□□□□ -0.44
ECHDC1-220ENST00000528402 CACNA1DQ01668 2161 aa12.32□□□□□ -0.44
ECHDC1-220ENST00000528402 ZNF705EA8MWA4 302 aaPredicted RBP12.31□□□□□ -0.44
ECHDC1-220ENST00000528402 MED6O75586 246 aa12.31□□□□□ -0.44
ECHDC1-220ENST00000528402 LY86O95711 162 aa12.31□□□□□ -0.44
ECHDC1-220ENST00000528402 CGB3P0DN86 165 aa12.31□□□□□ -0.44
ECHDC1-220ENST00000528402 CGB7P0DN87 165 aa12.31□□□□□ -0.44
ECHDC1-220ENST00000528402 ZNF16P17020 682 aaPredicted RBP12.31□□□□□ -0.44
ECHDC1-220ENST00000528402 LPAR6P43657 344 aa12.31□□□□□ -0.44
ECHDC1-220ENST00000528402 RAB7AP51149 207 aa12.31□□□□□ -0.44
ECHDC1-220ENST00000528402 CAV2P51636 162 aa12.31□□□□□ -0.44
ECHDC1-220ENST00000528402 AKR1C2P52895 323 aa12.31□□□□□ -0.44
ECHDC1-220ENST00000528402 EDDM3AQ14507 147 aa12.31□□□□□ -0.44
ECHDC1-220ENST00000528402 CXorf66Q5JRM2 361 aaPredicted RBP12.31□□□□□ -0.44
ECHDC1-220ENST00000528402 NCMAPQ5T1S8 102 aa12.31□□□□□ -0.44
ECHDC1-220ENST00000528402 FGFRL1Q8N441 504 aa12.31□□□□□ -0.44
ECHDC1-220ENST00000528402 WFIKKN1Q96NZ8 548 aa12.31□□□□□ -0.44
ECHDC1-220ENST00000528402 PARP11Q9NR21 331 aa12.31□□□□□ -0.44
ECHDC1-220ENST00000528402 CACFD1Q9UGQ2 172 aa12.31□□□□□ -0.44
ECHDC1-220ENST00000528402 NDRG3Q9UGV2 375 aa12.31□□□□□ -0.44
ECHDC1-220ENST00000528402 STRAPQ9Y3F4 350 aaKnown RBP12.31□□□□□ -0.44
ECHDC1-220ENST00000528402 RNF115Q9Y4L5 304 aa12.31□□□□□ -0.44
ECHDC1-220ENST00000528402 TRAV38-1A0A0B4J264 116 aa12.3□□□□□ -0.44
ECHDC1-220ENST00000528402 FAM24AA6NFZ4 105 aa12.3□□□□□ -0.44
ECHDC1-220ENST00000528402 TOR1AO14656 332 aa12.3□□□□□ -0.44
ECHDC1-220ENST00000528402 CHST1O43916 411 aa12.3□□□□□ -0.44
ECHDC1-220ENST00000528402 SSSCA1O60232 199 aa12.3□□□□□ -0.44
ECHDC1-220ENST00000528402 DFFBO76075 338 aa12.3□□□□□ -0.44
ECHDC1-220ENST00000528402 CLDN1O95832 211 aa12.3□□□□□ -0.44
ECHDC1-220ENST00000528402 IGKV1-39P01597 117 aa12.3□□□□□ -0.44
ECHDC1-220ENST00000528402 IGKV1D-39P04432 117 aa12.3□□□□□ -0.44
ECHDC1-220ENST00000528402 SPP1P10451 314 aa12.3□□□□□ -0.44
ECHDC1-220ENST00000528402 M6PRP20645 277 aa12.3□□□□□ -0.44
ECHDC1-220ENST00000528402 CHRNB4P30926 498 aa12.3□□□□□ -0.44
ECHDC1-220ENST00000528402 SSTR5P35346 364 aa12.3□□□□□ -0.44
ECHDC1-220ENST00000528402 PPP1CCP36873 323 aaKnown RBP12.3□□□□□ -0.44
ECHDC1-220ENST00000528402 SWI5Q1ZZU3 235 aa12.3□□□□□ -0.44
ECHDC1-220ENST00000528402 MORN2Q502X0 79 aa12.3□□□□□ -0.44
ECHDC1-220ENST00000528402 ZNF788Q6ZQV5 615 aa12.3□□□□□ -0.44
ECHDC1-220ENST00000528402 CORO2AQ92828 525 aa12.3□□□□□ -0.44
ECHDC1-220ENST00000528402 GPHA2Q96T91 129 aa12.3□□□□□ -0.44
ECHDC1-220ENST00000528402 MS4A5Q9H3V2 200 aa12.3□□□□□ -0.44
ECHDC1-220ENST00000528402 GNG12Q9UBI6 72 aa12.3□□□□□ -0.44
ECHDC1-220ENST00000528402 AKAP13Q12802 2813 aa12.3□□□□□ -0.44
ECHDC1-220ENST00000528402 PTPRQQ9UMZ3 2332 aa12.3□□□□□ -0.44
ECHDC1-220ENST00000528402 TRGV10A0A0A0MS01 117 aa12.29□□□□□ -0.44
ECHDC1-220ENST00000528402 NKX6-3A6NJ46 265 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms