RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 GAPTQ8N292 157 aa11.26□□□□□ -0.61
CAPN1-212ENST00000527887 NKAIN3Q8N8D7 197 aa11.26□□□□□ -0.61
CAPN1-212ENST00000527887 OR51D1Q8NGF3 324 aa11.26□□□□□ -0.61
CAPN1-212ENST00000527887 NEK7Q8TDX7 302 aa11.26□□□□□ -0.61
CAPN1-212ENST00000527887 UQCC2Q9BRT2 126 aa11.26□□□□□ -0.61
CAPN1-212ENST00000527887 GPR61Q9BZJ8 451 aa11.26□□□□□ -0.61
CAPN1-212ENST00000527887 C6orf62Q9GZU0 229 aaPredicted RBP11.26□□□□□ -0.61
CAPN1-212ENST00000527887 PLGRKTQ9HBL7 147 aa11.26□□□□□ -0.61
CAPN1-212ENST00000527887 AKIP1Q9NQ31 210 aa11.26□□□□□ -0.61
CAPN1-212ENST00000527887 ADAM30Q9UKF2 790 aa11.26□□□□□ -0.61
CAPN1-212ENST00000527887 MRPS28Q9Y2Q9 187 aaKnown RBP11.26□□□□□ -0.61
CAPN1-212ENST00000527887 TRAV8-7A0A075B6U6 113 aa11.25□□□□□ -0.61
CAPN1-212ENST00000527887 IGHV1-3A0A0C4DH29 117 aa11.25□□□□□ -0.61
CAPN1-212ENST00000527887 IFITM5A6NNB3 132 aa11.25□□□□□ -0.61
CAPN1-212ENST00000527887 SDCBPO00560 298 aaPredicted RBP11.25□□□□□ -0.61
CAPN1-212ENST00000527887 SPINT2O43291 252 aa11.25□□□□□ -0.61
CAPN1-212ENST00000527887 TPPPO94811 219 aa11.25□□□□□ -0.61
CAPN1-212ENST00000527887 IGKV1D-33P01593 117 aa11.25□□□□□ -0.61
CAPN1-212ENST00000527887 IGKV1-33P01594 117 aa11.25□□□□□ -0.61
CAPN1-212ENST00000527887 IGHG2P01859 326 aa11.25□□□□□ -0.61
CAPN1-212ENST00000527887 CLEC2LP0C7M8 214 aa11.25□□□□□ -0.61
CAPN1-212ENST00000527887 CD1BP29016 333 aa11.25□□□□□ -0.61
CAPN1-212ENST00000527887 SLC35B1P78383 322 aa11.25□□□□□ -0.61
CAPN1-212ENST00000527887 SPANXN2Q5MJ10 180 aa11.25□□□□□ -0.61
CAPN1-212ENST00000527887 ZNF554Q86TJ5 538 aa11.25□□□□□ -0.61
CAPN1-212ENST00000527887 CCDC190Q86UF4 302 aa11.25□□□□□ -0.61
CAPN1-212ENST00000527887 NR2C2APQ86WQ0 139 aa11.25□□□□□ -0.61
CAPN1-212ENST00000527887 TGIF2LXQ8IUE1 241 aa11.25□□□□□ -0.61
CAPN1-212ENST00000527887 FOXRED2Q8IWF2 684 aa11.25□□□□□ -0.61
CAPN1-212ENST00000527887 IZUMO1Q8IYV9 350 aa11.25□□□□□ -0.61
CAPN1-212ENST00000527887 JAGN1Q8N5M9 183 aa11.25□□□□□ -0.61
CAPN1-212ENST00000527887 OR8H1Q8NGG4 311 aa11.25□□□□□ -0.61
CAPN1-212ENST00000527887 OR2T10Q8NGZ9 312 aa11.25□□□□□ -0.61
CAPN1-212ENST00000527887 MRAPQ8TCY5 172 aa11.25□□□□□ -0.61
CAPN1-212ENST00000527887 BORCS5Q969J3 196 aa11.25□□□□□ -0.61
CAPN1-212ENST00000527887 GON7Q9BXV9 100 aa11.25□□□□□ -0.61
CAPN1-212ENST00000527887 ZNF581Q9P0T4 197 aa11.25□□□□□ -0.61
CAPN1-212ENST00000527887 RABL2AQ9UBK7 228 aaPredicted RBP11.25□□□□□ -0.61
CAPN1-212ENST00000527887 TRAPPC2LQ9UL33 140 aa11.25□□□□□ -0.61
CAPN1-212ENST00000527887 RABL2BQ9UNT1 228 aa11.25□□□□□ -0.61
CAPN1-212ENST00000527887 TRAV39A0A0B4J263 110 aa11.24□□□□□ -0.61
CAPN1-212ENST00000527887 A0A1W2PP11 408 aa11.24□□□□□ -0.61
CAPN1-212ENST00000527887 SERPINE3A8MV23 424 aa11.24□□□□□ -0.61
CAPN1-212ENST00000527887 FUT3P21217 361 aa11.24□□□□□ -0.61
CAPN1-212ENST00000527887 ZNF137PP52743 207 aa11.24□□□□□ -0.61
CAPN1-212ENST00000527887 PPP5CP53041 499 aa11.24□□□□□ -0.61
CAPN1-212ENST00000527887 DCTN2Q13561 401 aaKnown RBP11.24□□□□□ -0.61
CAPN1-212ENST00000527887 DIAPH2-AS1Q14236 149 aa11.24□□□□□ -0.61
CAPN1-212ENST00000527887 AWAT2Q6E213 333 aa11.24□□□□□ -0.61
CAPN1-212ENST00000527887 RAB12Q6IQ22 244 aa11.24□□□□□ -0.61
CAPN1-212ENST00000527887 SLC35E3Q7Z769 313 aa11.24□□□□□ -0.61
CAPN1-212ENST00000527887 MOB3BQ86TA1 216 aa11.24□□□□□ -0.61
CAPN1-212ENST00000527887 LYPD6Q86Y78 171 aa11.24□□□□□ -0.61
CAPN1-212ENST00000527887 CCDC107Q8WV48 283 aa11.24□□□□□ -0.61
CAPN1-212ENST00000527887 ST6GALNAC6Q969X2 333 aa11.24□□□□□ -0.61
CAPN1-212ENST00000527887 ORAI1Q96D31 301 aa11.24□□□□□ -0.61
CAPN1-212ENST00000527887 AURKAIP1Q9NWT8 199 aaPredicted RBP11.24□□□□□ -0.61
CAPN1-212ENST00000527887 ETAA1Q9NY74 926 aa11.24□□□□□ -0.61
CAPN1-212ENST00000527887 SH2D7A6NKC9 451 aaPredicted RBP11.23□□□□□ -0.61
CAPN1-212ENST00000527887 CTDSP2O14595 271 aa11.23□□□□□ -0.61
CAPN1-212ENST00000527887 UBBP0CG47 229 aa11.23□□□□□ -0.61
CAPN1-212ENST00000527887 IGLL1P15814 213 aa11.23□□□□□ -0.61
CAPN1-212ENST00000527887 TNFSF8P32971 234 aa11.23□□□□□ -0.61
CAPN1-212ENST00000527887 HNF4GQ14541 408 aa11.23□□□□□ -0.61
CAPN1-212ENST00000527887 KHDC1LQ5JSQ8 128 aa11.23□□□□□ -0.61
CAPN1-212ENST00000527887 GLT8D1Q68CQ7 371 aa11.23□□□□□ -0.61
CAPN1-212ENST00000527887 SLC25A48Q6ZT89 311 aaKnown RBP11.23□□□□□ -0.61
CAPN1-212ENST00000527887 MFSD4AQ8N468 514 aa11.23□□□□□ -0.61
CAPN1-212ENST00000527887 Q8N6K4 173 aa11.23□□□□□ -0.61
CAPN1-212ENST00000527887 RTN4IP1Q8WWV3 396 aaPredicted RBP11.23□□□□□ -0.61
CAPN1-212ENST00000527887 EAF1Q96JC9 268 aaPredicted RBP11.23□□□□□ -0.61
CAPN1-212ENST00000527887 CST11Q9H112 138 aa11.23□□□□□ -0.61
CAPN1-212ENST00000527887 ABCG5Q9H222 651 aa11.23□□□□□ -0.61
CAPN1-212ENST00000527887 LIN7CQ9NUP9 197 aaKnown RBP11.23□□□□□ -0.61
CAPN1-212ENST00000527887 SPATA2Q9UM82 520 aa11.23□□□□□ -0.61
CAPN1-212ENST00000527887 ETV7Q9Y603 341 aa11.23□□□□□ -0.61
CAPN1-212ENST00000527887 A0A1W2PPE3 182 aa11.22□□□□□ -0.61
CAPN1-212ENST00000527887 A0A1W2PPK0 400 aa11.22□□□□□ -0.61
CAPN1-212ENST00000527887 NCBP2LA6PVI3 153 aaKnown RBP11.22□□□□□ -0.61
CAPN1-212ENST00000527887 C12orf77C9JDV5 145 aa11.22□□□□□ -0.61
CAPN1-212ENST00000527887 AP4M1O00189 453 aa11.22□□□□□ -0.61
CAPN1-212ENST00000527887 RGS5O15539 181 aa11.22□□□□□ -0.61
CAPN1-212ENST00000527887 MOSP00540 346 aa11.22□□□□□ -0.61
CAPN1-212ENST00000527887 APOA1P02647 267 aa11.22□□□□□ -0.61
CAPN1-212ENST00000527887 PRB2P02812 416 aaPredicted RBP11.22□□□□□ -0.61
CAPN1-212ENST00000527887 MAS1P04201 325 aa11.22□□□□□ -0.61
CAPN1-212ENST00000527887 MGMTP16455 207 aa11.22□□□□□ -0.61
CAPN1-212ENST00000527887 RPL23AP62750 156 aaKnown RBP11.22□□□□□ -0.61
CAPN1-212ENST00000527887 C1orf100Q5SVJ3 147 aa11.22□□□□□ -0.61
CAPN1-212ENST00000527887 IDNKQ5T6J7 187 aa11.22□□□□□ -0.61
CAPN1-212ENST00000527887 TEX38Q6PEX7 206 aa11.22□□□□□ -0.61
CAPN1-212ENST00000527887 TMEM104Q8NE00 496 aa11.22□□□□□ -0.61
CAPN1-212ENST00000527887 Q96M66 194 aa11.22□□□□□ -0.61
CAPN1-212ENST00000527887 MCRIP2Q9BUT9 160 aaKnown RBP11.22□□□□□ -0.61
CAPN1-212ENST00000527887 SELENOIQ9C0D9 397 aa11.22□□□□□ -0.61
CAPN1-212ENST00000527887 MBNL3Q9NUK0 354 aaKnown RBP11.22□□□□□ -0.61
CAPN1-212ENST00000527887 KCNIP1Q9NZI2 227 aa11.22□□□□□ -0.61
CAPN1-212ENST00000527887 GNG12Q9UBI6 72 aa11.22□□□□□ -0.61
CAPN1-212ENST00000527887 ZMAT5Q9UDW3 170 aaKnown RBP11.22□□□□□ -0.61
CAPN1-212ENST00000527887 DAPK2Q9UIK4 370 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms