RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 ZNF554Q86TJ5 538 aa17.46■□□□□ 0.39
TRAPPC4-208ENST00000527680 C8orf59Q8N0T1 100 aaPredicted RBP17.46■□□□□ 0.39
TRAPPC4-208ENST00000527680 PACRGLQ8N7B6 248 aa17.46■□□□□ 0.39
TRAPPC4-208ENST00000527680 BPIFB6Q8NFQ5 453 aa17.46■□□□□ 0.39
TRAPPC4-208ENST00000527680 CYYR1Q96J86 154 aa17.46■□□□□ 0.39
TRAPPC4-208ENST00000527680 UBE2E2Q96LR5 201 aa17.46■□□□□ 0.39
TRAPPC4-208ENST00000527680 ANKRD60Q9BZ19 345 aa17.46■□□□□ 0.39
TRAPPC4-208ENST00000527680 KLK15Q9H2R5 256 aa17.46■□□□□ 0.39
TRAPPC4-208ENST00000527680 OR51J1Q9H342 316 aa17.46■□□□□ 0.39
TRAPPC4-208ENST00000527680 CNOT2Q9NZN8 540 aaKnown RBP17.46■□□□□ 0.39
TRAPPC4-208ENST00000527680 ABRACLQ9P1F3 81 aa17.46■□□□□ 0.39
TRAPPC4-208ENST00000527680 KIAA1456Q9P272 454 aa17.46■□□□□ 0.39
TRAPPC4-208ENST00000527680 ERGIC3Q9Y282 383 aa17.46■□□□□ 0.39
TRAPPC4-208ENST00000527680 LSM4Q9Y4Z0 139 aaKnown RBP17.46■□□□□ 0.39
TRAPPC4-208ENST00000527680 U3KQK5 164 aa17.46■□□□□ 0.39
TRAPPC4-208ENST00000527680 NBR2O15453 112 aa17.45■□□□□ 0.38
TRAPPC4-208ENST00000527680 YPEL1O60688 119 aa17.45■□□□□ 0.38
TRAPPC4-208ENST00000527680 LY86O95711 162 aa17.45■□□□□ 0.38
TRAPPC4-208ENST00000527680 OR3A3P47888 321 aa17.45■□□□□ 0.38
TRAPPC4-208ENST00000527680 LYPD6Q86Y78 171 aa17.45■□□□□ 0.38
TRAPPC4-208ENST00000527680 ODF3L1Q8IXM7 274 aa17.45■□□□□ 0.38
TRAPPC4-208ENST00000527680 OR2AK2Q8NG84 335 aa17.45■□□□□ 0.38
TRAPPC4-208ENST00000527680 IL1F10Q8WWZ1 152 aa17.45■□□□□ 0.38
TRAPPC4-208ENST00000527680 YPEL2Q96QA6 119 aa17.45■□□□□ 0.38
TRAPPC4-208ENST00000527680 NABP2Q9BQ15 211 aa17.45■□□□□ 0.38
TRAPPC4-208ENST00000527680 FAAP24Q9BTP7 215 aa17.45■□□□□ 0.38
TRAPPC4-208ENST00000527680 PSORS1C1Q9UIG5 152 aa17.45■□□□□ 0.38
TRAPPC4-208ENST00000527680 ZNF580Q9UK33 172 aa17.45■□□□□ 0.38
TRAPPC4-208ENST00000527680 VSIG4Q9Y279 399 aa17.45■□□□□ 0.38
TRAPPC4-208ENST00000527680 TRAV41A0A0B4J266 112 aa17.44■□□□□ 0.38
TRAPPC4-208ENST00000527680 ATP6V0E1O15342 81 aa17.44■□□□□ 0.38
TRAPPC4-208ENST00000527680 CD1AP06126 327 aa17.44■□□□□ 0.38
TRAPPC4-208ENST00000527680 OR8U8P0C7N1 319 aa17.44■□□□□ 0.38
TRAPPC4-208ENST00000527680 NANOGP1Q8N7R0 232 aa17.44■□□□□ 0.38
TRAPPC4-208ENST00000527680 ZNF491Q8N8L2 437 aa17.44■□□□□ 0.38
TRAPPC4-208ENST00000527680 ASCL2Q99929 193 aa17.44■□□□□ 0.38
TRAPPC4-208ENST00000527680 GNB4Q9HAV0 340 aa17.44■□□□□ 0.38
TRAPPC4-208ENST00000527680 CHMP1AQ9HD42 196 aaPredicted RBP17.44■□□□□ 0.38
TRAPPC4-208ENST00000527680 STEAP1Q9UHE8 339 aa17.44■□□□□ 0.38
TRAPPC4-208ENST00000527680 HLA-DRB1P01911 266 aa17.43■□□□□ 0.38
TRAPPC4-208ENST00000527680 GNAO1P09471 354 aa17.43■□□□□ 0.38
TRAPPC4-208ENST00000527680 UBBP0CG47 229 aa17.43■□□□□ 0.38
TRAPPC4-208ENST00000527680 PPIFP30405 207 aaKnown RBP17.43■□□□□ 0.38
TRAPPC4-208ENST00000527680 ZNF616Q08AN1 781 aa17.43■□□□□ 0.38
TRAPPC4-208ENST00000527680 C5orf64Q2M2E5 130 aa17.43■□□□□ 0.38
TRAPPC4-208ENST00000527680 ACSM3Q53FZ2 586 aa17.43■□□□□ 0.38
TRAPPC4-208ENST00000527680 GLT8D1Q68CQ7 371 aa17.43■□□□□ 0.38
TRAPPC4-208ENST00000527680 OR10K2Q6IF99 312 aa17.43■□□□□ 0.38
TRAPPC4-208ENST00000527680 SETD6Q8TBK2 473 aa17.43■□□□□ 0.38
TRAPPC4-208ENST00000527680 SULT4A1Q9BR01 284 aa17.43■□□□□ 0.38
TRAPPC4-208ENST00000527680 ZNF256Q9Y2P7 627 aaPredicted RBP17.43■□□□□ 0.38
TRAPPC4-208ENST00000527680 SAA2-SAA4A0A096LPE2 208 aa17.42■□□□□ 0.38
TRAPPC4-208ENST00000527680 IGHV7-81A0A0B4J1V7 117 aa17.42■□□□□ 0.38
TRAPPC4-208ENST00000527680 SAA2P0DJI9 122 aaPredicted RBP17.42■□□□□ 0.38
TRAPPC4-208ENST00000527680 RAB9AP51151 201 aa17.42■□□□□ 0.38
TRAPPC4-208ENST00000527680 FHL3Q13643 280 aa17.42■□□□□ 0.38
TRAPPC4-208ENST00000527680 INSL4Q14641 139 aa17.42■□□□□ 0.38
TRAPPC4-208ENST00000527680 ZNF833PQ6ZTB9 187 aa17.42■□□□□ 0.38
TRAPPC4-208ENST00000527680 C6orf201Q7Z4U5 140 aa17.42■□□□□ 0.38
TRAPPC4-208ENST00000527680 I3L521 148 aa17.41■□□□□ 0.38
TRAPPC4-208ENST00000527680 CHATP28329 748 aa17.41■□□□□ 0.38
TRAPPC4-208ENST00000527680 BLVRBP30043 206 aaPredicted RBP17.41■□□□□ 0.38
TRAPPC4-208ENST00000527680 INSL3P51460 131 aa17.41■□□□□ 0.38
TRAPPC4-208ENST00000527680 GABPB1Q06547 395 aaPredicted RBP17.41■□□□□ 0.38
TRAPPC4-208ENST00000527680 KIAA0141Q14154 515 aaPredicted RBP17.41■□□□□ 0.38
TRAPPC4-208ENST00000527680 PLGLAQ15195 96 aa17.41■□□□□ 0.38
TRAPPC4-208ENST00000527680 RBM48Q5RL73 367 aaKnown RBP17.41■□□□□ 0.38
TRAPPC4-208ENST00000527680 LY6G6FQ5SQ64 297 aa17.41■□□□□ 0.38
TRAPPC4-208ENST00000527680 MS4A15Q8N5U1 240 aa17.41■□□□□ 0.38
TRAPPC4-208ENST00000527680 MYOZ3Q8TDC0 251 aa17.41■□□□□ 0.38
TRAPPC4-208ENST00000527680 TMED9Q9BVK6 235 aa17.41■□□□□ 0.38
TRAPPC4-208ENST00000527680 TMEM59Q9BXS4 323 aa17.41■□□□□ 0.38
TRAPPC4-208ENST00000527680 PLCXD1Q9NUJ7 323 aa17.41■□□□□ 0.38
TRAPPC4-208ENST00000527680 PIPOXQ9P0Z9 390 aa17.41■□□□□ 0.38
TRAPPC4-208ENST00000527680 ST8SIA5O15466 376 aa17.4■□□□□ 0.38
TRAPPC4-208ENST00000527680 IGLV1-40P01703 118 aa17.4■□□□□ 0.38
TRAPPC4-208ENST00000527680 GNB1P62873 340 aa17.4■□□□□ 0.38
TRAPPC4-208ENST00000527680 RCN1Q15293 331 aa17.4■□□□□ 0.38
TRAPPC4-208ENST00000527680 HMGN3Q15651 99 aa17.4■□□□□ 0.38
TRAPPC4-208ENST00000527680 ECSCRQ19T08 205 aa17.4■□□□□ 0.38
TRAPPC4-208ENST00000527680 FAM27D1Q5T7N8 215 aa17.4■□□□□ 0.38
TRAPPC4-208ENST00000527680 LAIR2Q6ISS4 152 aa17.4■□□□□ 0.38
TRAPPC4-208ENST00000527680 NPBQ8NG41 125 aa17.4■□□□□ 0.38
TRAPPC4-208ENST00000527680 KCNG3Q8TAE7 436 aa17.4■□□□□ 0.38
TRAPPC4-208ENST00000527680 ABHD5Q8WTS1 349 aa17.4■□□□□ 0.38
TRAPPC4-208ENST00000527680 PLEKHJ1Q9NW61 149 aa17.4■□□□□ 0.38
TRAPPC4-208ENST00000527680 SORL1Q92673 2214 aa17.4■□□□□ 0.38
TRAPPC4-208ENST00000527680 TENM3Q9P273 2699 aa17.4■□□□□ 0.38
TRAPPC4-208ENST00000527680 RAB29O14966 203 aa17.39■□□□□ 0.37
TRAPPC4-208ENST00000527680 GSTP1P09211 210 aaKnown RBP17.39■□□□□ 0.37
TRAPPC4-208ENST00000527680 HTR2CP28335 458 aa17.39■□□□□ 0.37
TRAPPC4-208ENST00000527680 RPS27AP62979 156 aaKnown RBP17.39■□□□□ 0.37
TRAPPC4-208ENST00000527680 RUNX1Q01196 453 aa17.39■□□□□ 0.37
TRAPPC4-208ENST00000527680 C6orf141Q5SZD1 244 aa17.39■□□□□ 0.37
TRAPPC4-208ENST00000527680 FAM131AQ6UXB0 335 aa17.39■□□□□ 0.37
TRAPPC4-208ENST00000527680 DCUN1D4Q92564 292 aa17.39■□□□□ 0.37
TRAPPC4-208ENST00000527680 FBXL15Q9H469 300 aa17.39■□□□□ 0.37
TRAPPC4-208ENST00000527680 A3GALT2U3KPV4 340 aa17.39■□□□□ 0.37
TRAPPC4-208ENST00000527680 A0A1W2PN81 502 aa17.38■□□□□ 0.37
TRAPPC4-208ENST00000527680 PTGES3LE9PB15 166 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms