RNA–Protein interactions for RNA: ENST00000527025.5

CCDC90B-208, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 777 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-208ENST00000527025 SH2D7A6NKC9 451 aaPredicted RBP7.09□□□□□ -1.27
CCDC90B-208ENST00000527025 LEUTXA8MZ59 168 aa7.09□□□□□ -1.27
CCDC90B-208ENST00000527025 F2RL2O00254 374 aa7.09□□□□□ -1.27
CCDC90B-208ENST00000527025 TOR1AO14656 332 aa7.09□□□□□ -1.27
CCDC90B-208ENST00000527025 ORC5O43913 435 aa7.09□□□□□ -1.27
CCDC90B-208ENST00000527025 SSX5O60225 188 aa7.09□□□□□ -1.27
CCDC90B-208ENST00000527025 HPGDSO60760 199 aa7.09□□□□□ -1.27
CCDC90B-208ENST00000527025 SCGNO76038 276 aa7.09□□□□□ -1.27
CCDC90B-208ENST00000527025 APOA1P02647 267 aa7.09□□□□□ -1.27
CCDC90B-208ENST00000527025 AMY1AP04745 511 aa7.09□□□□□ -1.27
CCDC90B-208ENST00000527025 AMY2AP04746 511 aa7.09□□□□□ -1.27
CCDC90B-208ENST00000527025 GNB3P16520 340 aa7.09□□□□□ -1.27
CCDC90B-208ENST00000527025 ELK1P19419 428 aa7.09□□□□□ -1.27
CCDC90B-208ENST00000527025 GZMHP20718 246 aa7.09□□□□□ -1.27
CCDC90B-208ENST00000527025 KIR2DS4P43632 304 aa7.09□□□□□ -1.27
CCDC90B-208ENST00000527025 GNMTQ14749 295 aa7.09□□□□□ -1.27
CCDC90B-208ENST00000527025 HMGN3Q15651 99 aa7.09□□□□□ -1.27
CCDC90B-208ENST00000527025 CT45A1Q5HYN5 189 aa7.09□□□□□ -1.27
CCDC90B-208ENST00000527025 SHISA2Q6UWI4 295 aa7.09□□□□□ -1.27
CCDC90B-208ENST00000527025 ZNF439Q8NDP4 499 aa7.09□□□□□ -1.27
CCDC90B-208ENST00000527025 OR9G1Q8NH87 305 aa7.09□□□□□ -1.27
CCDC90B-208ENST00000527025 CT45A3Q8NHU0 189 aa7.09□□□□□ -1.27
CCDC90B-208ENST00000527025 ZNF596Q8TC21 504 aa7.09□□□□□ -1.27
CCDC90B-208ENST00000527025 CFHR4Q92496 578 aa7.09□□□□□ -1.27
CCDC90B-208ENST00000527025 AP3S1Q92572 193 aa7.09□□□□□ -1.27
CCDC90B-208ENST00000527025 ST6GALNAC6Q969X2 333 aa7.09□□□□□ -1.27
CCDC90B-208ENST00000527025 CMTM3Q96MX0 182 aa7.09□□□□□ -1.27
CCDC90B-208ENST00000527025 MMP28Q9H239 520 aa7.09□□□□□ -1.27
CCDC90B-208ENST00000527025 C12orf4Q9NQ89 552 aa7.09□□□□□ -1.27
CCDC90B-208ENST00000527025 SERTAD4Q9NUC0 356 aa7.09□□□□□ -1.27
CCDC90B-208ENST00000527025 PLEKHJ1Q9NW61 149 aa7.09□□□□□ -1.27
CCDC90B-208ENST00000527025 GFOD1Q9NXC2 390 aa7.09□□□□□ -1.27
CCDC90B-208ENST00000527025 NDUFA13Q9P0J0 144 aa7.09□□□□□ -1.27
CCDC90B-208ENST00000527025 COMMD3Q9UBI1 195 aa7.09□□□□□ -1.27
CCDC90B-208ENST00000527025 CMYA5Q8N3K9 4069 aa7.09□□□□□ -1.27
CCDC90B-208ENST00000527025 BTBD17A6NE02 478 aa7.08□□□□□ -1.28
CCDC90B-208ENST00000527025 TMEM235A6NFC5 223 aa7.08□□□□□ -1.28
CCDC90B-208ENST00000527025 CCDC160A6NGH7 325 aa7.08□□□□□ -1.28
CCDC90B-208ENST00000527025 FAM90A9PA6NNJ1 464 aa7.08□□□□□ -1.28
CCDC90B-208ENST00000527025 SERPINE3A8MV23 424 aa7.08□□□□□ -1.28
CCDC90B-208ENST00000527025 ZNF736B4DX44 427 aaPredicted RBP7.08□□□□□ -1.28
CCDC90B-208ENST00000527025 SDCBPO00560 298 aaPredicted RBP7.08□□□□□ -1.28
CCDC90B-208ENST00000527025 CTDSP2O14595 271 aa7.08□□□□□ -1.28
CCDC90B-208ENST00000527025 HBZP02008 142 aa7.08□□□□□ -1.28
CCDC90B-208ENST00000527025 FCGR3AP08637 254 aa7.08□□□□□ -1.28
CCDC90B-208ENST00000527025 GSTP1P09211 210 aaKnown RBP7.08□□□□□ -1.28
CCDC90B-208ENST00000527025 MNDAP41218 407 aa7.08□□□□□ -1.28
CCDC90B-208ENST00000527025 PRRX1P54821 245 aa7.08□□□□□ -1.28
CCDC90B-208ENST00000527025 TAS2R20P59543 309 aa7.08□□□□□ -1.28
CCDC90B-208ENST00000527025 TMEM95Q3KNT9 176 aa7.08□□□□□ -1.28
CCDC90B-208ENST00000527025 CDNFQ49AH0 187 aa7.08□□□□□ -1.28
CCDC90B-208ENST00000527025 HACD4Q5VWC8 232 aa7.08□□□□□ -1.28
CCDC90B-208ENST00000527025 MOB1BQ7L9L4 216 aa7.08□□□□□ -1.28
CCDC90B-208ENST00000527025 ZNF554Q86TJ5 538 aa7.08□□□□□ -1.28
CCDC90B-208ENST00000527025 LAX1Q8IWV1 398 aa7.08□□□□□ -1.28
CCDC90B-208ENST00000527025 IZUMO1Q8IYV9 350 aa7.08□□□□□ -1.28
CCDC90B-208ENST00000527025 Q8N2B8 174 aa7.08□□□□□ -1.28
CCDC90B-208ENST00000527025 OR10A7Q8NGE5 316 aa7.08□□□□□ -1.28
CCDC90B-208ENST00000527025 OR52L2PQ8NGH6 319 aa7.08□□□□□ -1.28
CCDC90B-208ENST00000527025 OR10V1Q8NGI7 309 aa7.08□□□□□ -1.28
CCDC90B-208ENST00000527025 WIPF2Q8TF74 440 aaPredicted RBP7.08□□□□□ -1.28
CCDC90B-208ENST00000527025 NUDCD2Q8WVJ2 157 aa7.08□□□□□ -1.28
CCDC90B-208ENST00000527025 DGCR14Q96DF8 476 aaKnown RBP7.08□□□□□ -1.28
CCDC90B-208ENST00000527025 CMSS1Q9BQ75 279 aaKnown RBP7.08□□□□□ -1.28
CCDC90B-208ENST00000527025 DCUN1D5Q9BTE7 237 aa7.08□□□□□ -1.28
CCDC90B-208ENST00000527025 PARP12Q9H0J9 701 aaKnown RBP7.08□□□□□ -1.28
CCDC90B-208ENST00000527025 AUNIPQ9H7T9 357 aa7.08□□□□□ -1.28
CCDC90B-208ENST00000527025 TAF9BQ9HBM6 251 aa7.08□□□□□ -1.28
CCDC90B-208ENST00000527025 Q9N2K0 584 aa7.08□□□□□ -1.28
CCDC90B-208ENST00000527025 TRAPPC2LQ9UL33 140 aa7.08□□□□□ -1.28
CCDC90B-208ENST00000527025 WNK1Q9H4A3 2382 aa7.07□□□□□ -1.28
CCDC90B-208ENST00000527025 TRAV18A0A075B6X5 111 aa7.07□□□□□ -1.28
CCDC90B-208ENST00000527025 A0A1B0GUS0 222 aa7.07□□□□□ -1.28
CCDC90B-208ENST00000527025 TIMM23O14925 209 aa7.07□□□□□ -1.28
CCDC90B-208ENST00000527025 XRCC3O43542 346 aa7.07□□□□□ -1.28
CCDC90B-208ENST00000527025 HLA-DQB1P01920 261 aa7.07□□□□□ -1.28
CCDC90B-208ENST00000527025 PTHLHP12272 177 aa7.07□□□□□ -1.28
CCDC90B-208ENST00000527025 SOX6P35712 828 aa7.07□□□□□ -1.28
CCDC90B-208ENST00000527025 REG1BP48304 166 aa7.07□□□□□ -1.28
CCDC90B-208ENST00000527025 HLA-DRB3P79483 266 aa7.07□□□□□ -1.28
CCDC90B-208ENST00000527025 ARL6IP1Q15041 203 aa7.07□□□□□ -1.28
CCDC90B-208ENST00000527025 PNLIPRP3Q17RR3 467 aa7.07□□□□□ -1.28
CCDC90B-208ENST00000527025 C6orf183Q5T699 404 aa7.07□□□□□ -1.28
CCDC90B-208ENST00000527025 MZT2AQ6P582 158 aa7.07□□□□□ -1.28
CCDC90B-208ENST00000527025 ODF3L1Q8IXM7 274 aa7.07□□□□□ -1.28
CCDC90B-208ENST00000527025 PRR18Q8N4B5 295 aa7.07□□□□□ -1.28
CCDC90B-208ENST00000527025 DRAM1Q8N682 238 aa7.07□□□□□ -1.28
CCDC90B-208ENST00000527025 DTX3Q8N9I9 347 aa7.07□□□□□ -1.28
CCDC90B-208ENST00000527025 OR52M1Q8NGK5 317 aa7.07□□□□□ -1.28
CCDC90B-208ENST00000527025 OR56B4Q8NH76 319 aa7.07□□□□□ -1.28
CCDC90B-208ENST00000527025 RIMS4Q9H426 269 aaPredicted RBP7.07□□□□□ -1.28
CCDC90B-208ENST00000527025 ANAPC10Q9UM13 185 aa7.07□□□□□ -1.28
CCDC90B-208ENST00000527025 IGKV1D-8A0A087WSZ0 117 aa7.06□□□□□ -1.28
CCDC90B-208ENST00000527025 IGHV3-72A0A0B4J1Y9 119 aa7.06□□□□□ -1.28
CCDC90B-208ENST00000527025 IGKV1-6A0A0C4DH72 117 aa7.06□□□□□ -1.28
CCDC90B-208ENST00000527025 CD3GP09693 182 aa7.06□□□□□ -1.28
CCDC90B-208ENST00000527025 DTYMKP23919 212 aa7.06□□□□□ -1.28
CCDC90B-208ENST00000527025 PPP1CCP36873 323 aaKnown RBP7.06□□□□□ -1.28
CCDC90B-208ENST00000527025 HERPUD1Q15011 391 aa7.06□□□□□ -1.28
CCDC90B-208ENST00000527025 SRSF7Q16629 238 aaKnown RBP eCLIP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms